BLASTX nr result

ID: Coptis25_contig00002278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002278
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36426.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002267795.1| PREDICTED: putative disease resistance prote...    80   2e-13
ref|XP_002273714.2| PREDICTED: putative disease resistance RPP13...    79   5e-13
emb|CBI23873.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...    78   8e-13

>emb|CBI36426.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = -3

Query: 240 STYIHRLGQLSHEDCWSFFKHIALR-EIQDNREKFEEIGKKIAWKCKGVPLAVKIIASLM 64
           +TY H LG+LS E CWS F +IA     ++  E+ E IG+KIA KC+G+PLA K++ SLM
Sbjct: 120 TTYKHPLGELSKEQCWSLFSNIAFYGRSREKVEELENIGRKIADKCRGLPLAAKVLGSLM 179

Query: 63  CRKRSVVEWEDVLASDIWEV 4
             K +  +WE +L ++IW++
Sbjct: 180 RLKDNKEDWESILNNEIWQL 199


>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 928

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = -3

Query: 240 STYIHRLGQLSHEDCWSFFKHIALR-EIQDNREKFEEIGKKIAWKCKGVPLAVKIIASLM 64
           +TY H LG+LS E CWS F +IA     ++  E+ E IG+KIA KC+G+PLA K++ SLM
Sbjct: 322 TTYKHPLGELSKEQCWSLFSNIAFYGRSREKVEELENIGRKIADKCRGLPLAAKVLGSLM 381

Query: 63  CRKRSVVEWEDVLASDIWEV 4
             K +  +WE +L ++IW++
Sbjct: 382 RLKDNKEDWESILNNEIWQL 401


>ref|XP_002273714.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1274

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = -3

Query: 240 STYIHRLGQLSHEDCWSFFKHIALREIQDNRE-KFEEIGKKIAWKCKGVPLAVKIIASLM 64
           S  IH LGQLS EDCWS F   A +    +R  K EEIGK+I  KCKG+PLA K +   +
Sbjct: 325 SDRIHHLGQLSFEDCWSLFAKQAFKNGDSSRHPKLEEIGKEIVKKCKGLPLAAKTLGGAL 384

Query: 63  CRKRSVVEWEDVLASDIWEV 4
             +  V EWE+VL S+ W++
Sbjct: 385 YSESRVEEWENVLNSETWDL 404


>emb|CBI23873.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = -3

Query: 240 STYIHRLGQLSHEDCWSFFKHIALREIQDNRE-KFEEIGKKIAWKCKGVPLAVKIIASLM 64
           S  IH LGQLS EDCWS F   A +    +R  K EEIGK+I  KCKG+PLA K +   +
Sbjct: 3   SDRIHHLGQLSFEDCWSLFAKQAFKNGDSSRHPKLEEIGKEIVKKCKGLPLAAKTLGGAL 62

Query: 63  CRKRSVVEWEDVLASDIWEV 4
             +  V EWE+VL S+ W++
Sbjct: 63  YSESRVEEWENVLNSETWDL 82


>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
 Frame = -3

Query: 228 HRLG--QLSHEDCWSFFKHIALRE-IQDNREKFEEIGKKIAWKCKGVPLAVKIIASLMCR 58
           HR+   +LS E C S F H+A +E  +D RE+  +IG+KIA KCKG+PLA K++  LM  
Sbjct: 236 HRINIKELSDEICRSIFNHVAFQERSKDERERLTDIGEKIASKCKGLPLAAKVLGGLMQF 295

Query: 57  KRSVVEWEDVLASDIWEV 4
           KR+  EWE VL+S++WE+
Sbjct: 296 KRTREEWERVLSSELWEL 313


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