BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002277
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20892.3| unnamed protein product [Vitis vinifera]              373   e-101
ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycin...   358   1e-96
ref|XP_002281548.1| PREDICTED: putative rhomboid protease ydcA-l...   354   2e-95
ref|XP_002874277.1| rhomboid family protein [Arabidopsis lyrata ...   348   1e-93
ref|XP_002516572.1| conserved hypothetical protein [Ricinus comm...   348   1e-93

>emb|CBI20892.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  373 bits (957), Expect = e-101
 Identities = 199/296 (67%), Positives = 226/296 (76%), Gaps = 13/296 (4%)
 Frame = -3

Query: 1090 MGQWQHL------STAPIPLKLSLIFPHPPPF-KFPTISPSVYSSPRXXXXXXXXXXXSP 932
            MGQ+Q L      +   +P+  + + P    F K PT S   ++ P             P
Sbjct: 1    MGQFQQLLAHRPCTIKLMPMPSASLLPINAAFSKLPTSSSLRFTPPTRLLPISAA----P 56

Query: 931  VRFRHVCNFNDSDMVSQLELGKSDGKKKP---VTGIFWIILVNLGIFVADHWFHLREMKA 761
             RF  VC  N SD+ SQ+ELGKS GK KP   V GIFWIIL+NLGIFVADH F +R +K 
Sbjct: 57   SRF--VCKMNGSDLTSQMELGKSGGKWKPQRQVNGIFWIILLNLGIFVADHLFQVRAIKT 114

Query: 760  LYLYHNLPAWYQFVTATFCHFNWKHLSSNLFFLYIFGKLVEEEEGSFALWTSYILTGAGA 581
            LYLYHN PAWYQFVTATFCH NW HLSSNLFFLYIFG+LVEEEEG+F LW SYILTGAGA
Sbjct: 115  LYLYHNWPAWYQFVTATFCHANWNHLSSNLFFLYIFGRLVEEEEGNFGLWLSYILTGAGA 174

Query: 580  NLVSWLVLPRNLVSVGASGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQS 401
            NLVSWLVLPRN VSVGASGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQ+
Sbjct: 175  NLVSWLVLPRNAVSVGASGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQA 234

Query: 400  SAGLSGR---GYALQNVNHIAHLSGALVGVALMWLLSKVPSQPPDEEVSILNRKTN 242
            S GLSG    GY++Q++NHIAHLSGAL+GV L+WLLS+VPSQP ++EVS L+ KT+
Sbjct: 235  STGLSGTFLGGYSIQSINHIAHLSGALIGVLLVWLLSRVPSQPSNQEVSTLHTKTD 290


>ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycine max]
            gi|255635279|gb|ACU17993.1| unknown [Glycine max]
          Length = 281

 Score =  358 bits (920), Expect = 1e-96
 Identities = 188/271 (69%), Positives = 208/271 (76%), Gaps = 4/271 (1%)
 Frame = -3

Query: 1072 LSTAPIPLKLSLIFPHPPPFKFPTISPSVYSSPRXXXXXXXXXXXSPVRFRHVCNFNDSD 893
            LS  P  +     F   PP +  T  PS+ +              S       CN N SD
Sbjct: 11   LSCKPSHIHALKPFHSLPPLRTFTPKPSLNAKSHHHHHPLLTLLRSHRTLAPCCNSNKSD 70

Query: 892  MVSQLELGKSDGKKKP---VTGIFWIILVNLGIFVADHWFHLREMKALYLYHNLPAWYQF 722
            ++SQLELGK + K KP   V GIFWIIL+N+ IFVADH+F +  +KALYLYHN P+WYQF
Sbjct: 71   IMSQLELGKPEQKGKPEKRVNGIFWIILLNIAIFVADHFFRVNGIKALYLYHNWPSWYQF 130

Query: 721  VTATFCHFNWKHLSSNLFFLYIFGKLVEEEEGSFALWTSYILTGAGANLVSWLVLPRNLV 542
            VTATFCH NWKHLSSNLFFLYIFGKLVEEEEG+FALW SYILTG GANLVSWLVLPRN V
Sbjct: 131  VTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWLVLPRNTV 190

Query: 541  SVGASGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQSSAGLSGR-GYALQ 365
            SVGASGAVFGLF+ISVLVK+SWDWRKILEVLILGQFVIEKVMEAAQ+S  LSGR GYALQ
Sbjct: 191  SVGASGAVFGLFSISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGRGGYALQ 250

Query: 364  NVNHIAHLSGALVGVALMWLLSKVPSQPPDE 272
            +VNHIAHLSGALVGV L+WLLSKVPS P D+
Sbjct: 251  SVNHIAHLSGALVGVLLVWLLSKVPSDPSDQ 281


>ref|XP_002281548.1| PREDICTED: putative rhomboid protease ydcA-like [Vitis vinifera]
          Length = 222

 Score =  354 bits (909), Expect = 2e-95
 Identities = 176/219 (80%), Positives = 194/219 (88%), Gaps = 6/219 (2%)
 Frame = -3

Query: 880 LELGKSDGKKKP---VTGIFWIILVNLGIFVADHWFHLREMKALYLYHNLPAWYQFVTAT 710
           +ELGKS GK KP   V GIFWIIL+NLGIFVADH F +R +K LYLYHN PAWYQFVTAT
Sbjct: 1   MELGKSGGKWKPQRQVNGIFWIILLNLGIFVADHLFQVRAIKTLYLYHNWPAWYQFVTAT 60

Query: 709 FCHFNWKHLSSNLFFLYIFGKLVEEEEGSFALWTSYILTGAGANLVSWLVLPRNLVSVGA 530
           FCH NW HLSSNLFFLYIFG+LVEEEEG+F LW SYILTGAGANLVSWLVLPRN VSVGA
Sbjct: 61  FCHANWNHLSSNLFFLYIFGRLVEEEEGNFGLWLSYILTGAGANLVSWLVLPRNAVSVGA 120

Query: 529 SGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQSSAGLSGR---GYALQNV 359
           SGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQ+S GLSG    GY++Q++
Sbjct: 121 SGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQASTGLSGTFLGGYSIQSI 180

Query: 358 NHIAHLSGALVGVALMWLLSKVPSQPPDEEVSILNRKTN 242
           NHIAHLSGAL+GV L+WLLS+VPSQP ++EVS L+ KT+
Sbjct: 181 NHIAHLSGALIGVLLVWLLSRVPSQPSNQEVSTLHTKTD 219


>ref|XP_002874277.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320114|gb|EFH50536.1| rhomboid family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 281

 Score =  348 bits (894), Expect = 1e-93
 Identities = 182/281 (64%), Positives = 208/281 (74%), Gaps = 6/281 (2%)
 Frame = -3

Query: 1090 MGQWQHLSTAPIPLKLSLIFPHPPPFKFPTISPSVYSSPRXXXXXXXXXXXSPVRFRHVC 911
            M Q  H+    +P + SL F  PP  +         SSP            +  R +  C
Sbjct: 1    MSQLLHVHRLSLP-QSSLRFRFPPLHR-----RRAASSPSNSTESTVFRSLTVSRSQITC 54

Query: 910  NFNDSDMVSQLELGKSDGKKKP---VTGIFWIILVNLGIFVADHWFHLREMKALYLYHNL 740
             F+ SD+  Q EL K+   +KP     GIFWIIL+NLGI+VADH+F +R +K+LYLYHN 
Sbjct: 55   RFSQSDITPQFELDKAQDNRKPQKRANGIFWIILINLGIYVADHFFQVRGIKSLYLYHNF 114

Query: 739  PAWYQFVTATFCHFNWKHLSSNLFFLYIFGKLVEEEEGSFALWTSYILTGAGANLVSWLV 560
            PAWYQFVTATFCH NW HLSSNLFFLYIFGKLVEEEEG+F LW SY+ TG GANLVSWLV
Sbjct: 115  PAWYQFVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLV 174

Query: 559  LPRNLVSVGASGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQSSAGLSGR 380
            LPRN VSVGASGAVFGLFAISVLVK+SWDWRKILEVLILGQFV+E+VMEAAQ+SAGLSG 
Sbjct: 175  LPRNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVERVMEAAQASAGLSGT 234

Query: 379  ---GYALQNVNHIAHLSGALVGVALMWLLSKVPSQPPDEEV 266
               GY+LQ VNHIAHLSGALVGV L+WLLSK PS+  D+EV
Sbjct: 235  IYGGYSLQTVNHIAHLSGALVGVVLVWLLSKFPSESVDQEV 275


>ref|XP_002516572.1| conserved hypothetical protein [Ricinus communis]
            gi|223544392|gb|EEF45913.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 308

 Score =  348 bits (894), Expect = 1e-93
 Identities = 188/308 (61%), Positives = 220/308 (71%), Gaps = 17/308 (5%)
 Frame = -3

Query: 1111 SLSAPKNMGQWQHLSTAPI-PLKLSLIFP---HPPPFK-------FPTISPSVYSSPRXX 965
            SL+ P  MGQ Q    + + P   S   P   H  PF        FP   P +  S    
Sbjct: 13   SLALPPKMGQLQLQQLSLVKPSYSSTCVPMASHIRPFSMSLPKTNFPAYPPCLLPS---- 68

Query: 964  XXXXXXXXXSPVRFRHVCNFNDSDMVSQLELGKSDGKKKP---VTGIFWIILVNLGIFVA 794
                       +  R VC  + SDM+  LEL K +G++KP     GIFWIIL+NLGI+VA
Sbjct: 69   --------FPALHSRFVCKMSGSDMIRPLELDKPEGRRKPQKQANGIFWIILLNLGIYVA 120

Query: 793  DHWFHLREMKALYLYHNLPAWYQFVTATFCHFNWKHLSSNLFFLYIFGKLVEEEEGSFAL 614
            DH+F +R +K+LYLYHN P WYQF++ATFCH +W+HLSSNLFFLYIFGKLVEEEEG+FAL
Sbjct: 121  DHFFQVRGIKSLYLYHNRPTWYQFISATFCHASWEHLSSNLFFLYIFGKLVEEEEGNFAL 180

Query: 613  WTSYILTGAGANLVSWLVLPRNLVSVGASGAVFGLFAISVLVKISWDWRKILEVLILGQF 434
            W SYILTG GANLVSWLVLPRN VSVGASGAVFGLFAISVLVKI+WDWRKILEVLILGQF
Sbjct: 181  WLSYILTGVGANLVSWLVLPRNAVSVGASGAVFGLFAISVLVKITWDWRKILEVLILGQF 240

Query: 433  VIEKVMEAAQSSAGLSGR---GYALQNVNHIAHLSGALVGVALMWLLSKVPSQPPDEEVS 263
            VIEKVMEAAQ+SA LSG    GY +Q+VNHIAHLSGAL+GV L+WL+S++P+ PPD E S
Sbjct: 241  VIEKVMEAAQASAALSGTFRGGYPMQSVNHIAHLSGALIGVVLVWLVSRIPA-PPDHEAS 299

Query: 262  ILNRKTNK 239
             L   + K
Sbjct: 300  KLQGNSGK 307