BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002272
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   293   2e-84
emb|CBI39777.3| unnamed protein product [Vitis vinifera]              290   3e-83
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...   283   9e-81
ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Gl...   283   1e-80
ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin...   286   2e-80

>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
            vinifera] gi|147768836|emb|CAN78130.1| hypothetical
            protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  293 bits (751), Expect(2) = 2e-84
 Identities = 155/239 (64%), Positives = 168/239 (70%), Gaps = 1/239 (0%)
 Frame = -1

Query: 1231 KYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSSQ 1052
            KYG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVINGKQVEIKRTIPKGS Q
Sbjct: 41   KYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQ 100

Query: 1051 SKDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQV 872
            SKDFKTKKIFVGGVP+TVTEDEFKNFFSKYG VVEHQIIRDH TNRSRGFGFI++D+E+V
Sbjct: 101  SKDFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEV 160

Query: 871  VDDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXX 692
            VD+++  GNMIDM GTQVEIKKAEPKK SNPP APA+ S+SR R                
Sbjct: 161  VDEMISKGNMIDMAGTQVEIKKAEPKKASNPPPAPAYGSNSRARSFSDGFGGFGSSYGGF 220

Query: 691  XXXXXXXXYRTP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 518
                    YRTP                               +  Y+GES LGYSSRF
Sbjct: 221  DSGFGPGPYRTPGGVGGRLGGYGGYGSSGSEFGGGYGGFGSSSLGGYRGESSLGYSSRF 279



 Score = 47.4 bits (111), Expect(2) = 2e-84
 Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
 Frame = -2

Query: 1434 MGSKTKS---FENEKASPGKIFIGGLAKDTTLATFTNY 1330
            MGSK+KS      + ASPGKIFIGGLAKDTT ATF  +
Sbjct: 1    MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKH 38



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = -1

Query: 1030 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 851
            KIF+GG+    T   F   F KYG++ +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20   KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79

Query: 850  GNMIDMDGTQVEIKKAEPK 794
             ++I  +G QVEIK+  PK
Sbjct: 80   THVI--NGKQVEIKRTIPK 96


>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  290 bits (741), Expect(2) = 3e-83
 Identities = 140/164 (85%), Positives = 151/164 (92%)
 Frame = -1

Query: 1231 KYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSSQ 1052
            KYG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVINGKQVEIKRTIPKGS Q
Sbjct: 41   KYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQ 100

Query: 1051 SKDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQV 872
            SKDFKTKKIFVGGVP+TVTEDEFKNFFSKYG VVEHQIIRDH TNRSRGFGFI++D+E+V
Sbjct: 101  SKDFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEV 160

Query: 871  VDDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSAPAFASDSRVR 740
            VD+++  GNMIDM GTQVEIKKAEPKK SNPP APA+ S+SR R
Sbjct: 161  VDEMISKGNMIDMAGTQVEIKKAEPKKASNPPPAPAYGSNSRAR 204



 Score = 47.4 bits (111), Expect(2) = 3e-83
 Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
 Frame = -2

Query: 1434 MGSKTKS---FENEKASPGKIFIGGLAKDTTLATFTNY 1330
            MGSK+KS      + ASPGKIFIGGLAKDTT ATF  +
Sbjct: 1    MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKH 38



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = -1

Query: 1030 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 851
            KIF+GG+    T   F   F KYG++ +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20   KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79

Query: 850  GNMIDMDGTQVEIKKAEPK 794
             ++I  +G QVEIK+  PK
Sbjct: 80   THVI--NGKQVEIKRTIPK 96


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
            communis] gi|223538031|gb|EEF39644.1| Heterogeneous
            nuclear ribonucleoprotein A1, putative [Ricinus communis]
          Length = 348

 Score =  283 bits (724), Expect(2) = 9e-81
 Identities = 149/239 (62%), Positives = 166/239 (69%), Gaps = 1/239 (0%)
 Frame = -1

Query: 1231 KYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSSQ 1052
            +YG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVI+GKQVEIKRTIPKGS Q
Sbjct: 41   RYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQ 100

Query: 1051 SKDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQV 872
            SKDFKTKKIFVGG+P++VTEDEFK FFSKYG VVEHQIIRDH TNRSRGFGFI++D+E+ 
Sbjct: 101  SKDFKTKKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEET 160

Query: 871  VDDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXX 692
            VD++L NGNMIDM GTQVEIKKAEPKK SNPP AP++ S+SR R                
Sbjct: 161  VDEMLSNGNMIDMAGTQVEIKKAEPKKASNPPPAPSYGSNSRGRSYNDSYGGFGGSYGGF 220

Query: 691  XXXXXXXXYRTP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 518
                    YRTP                               +  Y+GES LGYS RF
Sbjct: 221  DGGFGPGPYRTPGSLGGRLSSAYGYGSGGGDFGGSYGSFGGSSLGGYRGESSLGYSGRF 279



 Score = 45.4 bits (106), Expect(2) = 9e-81
 Identities = 24/38 (63%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
 Frame = -2

Query: 1434 MGSKTKS---FENEKASPGKIFIGGLAKDTTLATFTNY 1330
            M SK+KS      + ASPGKIFIGGLAKDTT ATF  +
Sbjct: 1    MASKSKSDNPHSGDGASPGKIFIGGLAKDTTYATFNKH 38



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 32/79 (40%), Positives = 47/79 (59%)
 Frame = -1

Query: 1030 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 851
            KIF+GG+    T   F   F +YG + +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20   KIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 850  GNMIDMDGTQVEIKKAEPK 794
             ++I   G QVEIK+  PK
Sbjct: 80   THVI--HGKQVEIKRTIPK 96


>ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
          Length = 352

 Score =  283 bits (724), Expect(2) = 1e-80
 Identities = 137/165 (83%), Positives = 151/165 (91%)
 Frame = -1

Query: 1234 EKYGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSS 1055
            EKYG ITDSVIMKDR+TG PRGFGFITYADPSVVD VI+E HV+NGKQVEIKRTIPKGSS
Sbjct: 39   EKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQENHVVNGKQVEIKRTIPKGSS 98

Query: 1054 QSKDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQ 875
            Q+ DFKTKKIFVGG+PT+V+EDE KNFFSKYG VVEH+IIRDHTT RSRGFGFIV+D+E+
Sbjct: 99   QANDFKTKKIFVGGIPTSVSEDELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEK 158

Query: 874  VVDDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSAPAFASDSRVR 740
            VVD+IL +GNMIDM GTQVEIKKAEPKK+SNP S P FASDSR R
Sbjct: 159  VVDNILADGNMIDMGGTQVEIKKAEPKKSSNPASLPPFASDSRAR 203



 Score = 44.7 bits (104), Expect(2) = 1e-80
 Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
 Frame = -2

Query: 1422 TKSFEN----EKASPGKIFIGGLAKDTTLATFTNY 1330
            ++ F+N    + ASPGKIFIGGLAKDTTL TF  Y
Sbjct: 3    SRKFDNPHSGDGASPGKIFIGGLAKDTTLETFVKY 37



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 34/82 (41%), Positives = 51/82 (62%)
 Frame = -1

Query: 1030 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 851
            KIF+GG+    T + F  +F KYG + +  I++D  T R RGFGFI Y +  VVD ++  
Sbjct: 19   KIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQE 78

Query: 850  GNMIDMDGTQVEIKKAEPKKTS 785
             +++  +G QVEIK+  PK +S
Sbjct: 79   NHVV--NGKQVEIKRTIPKGSS 98


>ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like [Cucumis
            sativus] gi|449496860|ref|XP_004160246.1| PREDICTED:
            nuclear polyadenylated RNA-binding protein 4-like
            [Cucumis sativus]
          Length = 347

 Score =  286 bits (732), Expect(2) = 2e-80
 Identities = 148/237 (62%), Positives = 164/237 (69%)
 Frame = -1

Query: 1228 YGGITDSVIMKDRYTGHPRGFGFITYADPSVVDIVIEETHVINGKQVEIKRTIPKGSSQS 1049
            YG ITDSVIMKDRYTG PRGFGFITYADPSVVD VIE+THVINGKQVEIKRTIPKG  QS
Sbjct: 42   YGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQS 101

Query: 1048 KDFKTKKIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVV 869
            KDFKTKKIFVGG+P+TVTEDEFK+FFSKYG +VEHQIIRDH TNRSRGFGFIV++ E+VV
Sbjct: 102  KDFKTKKIFVGGIPSTVTEDEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVV 161

Query: 868  DDILVNGNMIDMDGTQVEIKKAEPKKTSNPPSAPAFASDSRVRPLXXXXXXXXXXXXXXX 689
            D+IL  GNMIDM GTQVEIKKAEPKK+SNP  APA+ S+SR R                 
Sbjct: 162  DEILSKGNMIDMSGTQVEIKKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFD 221

Query: 688  XXXXXXXYRTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIDNYQGESPLGYSSRF 518
                   +R P                              +  Y+G+S LGYSSRF
Sbjct: 222  AGFGPGPFRNPGGIGGRIGSGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRF 278



 Score = 41.2 bits (95), Expect(2) = 2e-80
 Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
 Frame = -2

Query: 1434 MGSKTKSFEN----EKASPGKIFIGGLAKDTTLATFTNY 1330
            M SK+KS EN    + ASPGKIFIGGLAKDTT   F  +
Sbjct: 1    MASKSKS-ENPHTGDGASPGKIFIGGLAKDTTYTQFNKH 38



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 32/79 (40%), Positives = 48/79 (60%)
 Frame = -1

Query: 1030 KIFVGGVPTTVTEDEFKNFFSKYGNVVEHQIIRDHTTNRSRGFGFIVYDNEQVVDDILVN 851
            KIF+GG+    T  +F   F  YG + +  I++D  T + RGFGFI Y +  VVD ++ +
Sbjct: 20   KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 850  GNMIDMDGTQVEIKKAEPK 794
             ++I  +G QVEIK+  PK
Sbjct: 80   THVI--NGKQVEIKRTIPK 96