BLASTX nr result

ID: Coptis25_contig00002266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002266
         (1627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276733.1| PREDICTED: uncharacterized protein LOC100266...   288   3e-75
ref|XP_002528624.1| conserved hypothetical protein [Ricinus comm...   280   6e-73
dbj|BAE48661.1| Pm27 [Prunus mume]                                    278   2e-72
ref|XP_004139810.1| PREDICTED: uncharacterized protein LOC101208...   273   1e-70
ref|XP_002304076.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-69

>ref|XP_002276733.1| PREDICTED: uncharacterized protein LOC100266910 [Vitis vinifera]
          Length = 363

 Score =  288 bits (737), Expect(2) = 3e-75
 Identities = 159/283 (56%), Positives = 183/283 (64%), Gaps = 6/283 (2%)
 Frame = -3

Query: 1193 DWEDATCSVCMEYPHNAVLLLCSSHEKGCRPYMCGTSYRHSNCLDQFKKAYTKVASPPHG 1014
            DWEDATCSVCMEYPHNAVLLLCSSH+KGCRPYMCGTS+R+SNCLDQ+KKAYTKV S   G
Sbjct: 47   DWEDATCSVCMEYPHNAVLLLCSSHDKGCRPYMCGTSFRYSNCLDQYKKAYTKVTSTNPG 106

Query: 1013 HGNLWHELANNSSVGFGSGVHAEKCEVMELACPLCRGQVKGMTVVEPARKYLDAKKRSCT 834
                     +N  +   S    EKCEV ELACPLCRGQVKG TVVEPAR+YL+AKKRSC 
Sbjct: 107  QS--LDGSVDNPIMNPVSNWPVEKCEVTELACPLCRGQVKGWTVVEPAREYLNAKKRSCM 164

Query: 833  QDCCSFTGTYKELRKHVKQEHPSARPREVDPIXXXXXXXXXXXXEYDDVLSTIHATTPGA 654
            QD CSF G YKELRKHV+ EHPSA+PREVDPI            E DDV+STI ++ PGA
Sbjct: 165  QDNCSFVGNYKELRKHVRAEHPSAQPREVDPILEQKWRRLERERERDDVISTIRSSMPGA 224

Query: 653  RVFGDYVIE-DHYGFXXXXXXXXXXXDF---GGSELGISDPIFNIFLMYQAYN-AGNASL 489
             VFGDYVIE +HY F                 G E+G    + N+FL+  A+  AGN  L
Sbjct: 225  MVFGDYVIEGNHYDFDSDEGEHFDADAVERNEGFEVGFDSNLVNVFLLLHAFGPAGNIGL 284

Query: 488  QSRLRR-QRAYSHTMNEIGRRNVGIPAVTTASGEDASDGGNDD 363
              RLRR +R     ++E     VGI   + A   D +D  N D
Sbjct: 285  NRRLRRSERGLGRALDE---GAVGIHETSPADSIDENDIHNSD 324



 Score = 22.3 bits (46), Expect(2) = 3e-75
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 1308 KKSWIALEKKDWE 1270
            KK   +LEKKDWE
Sbjct: 37   KKCCKSLEKKDWE 49


>ref|XP_002528624.1| conserved hypothetical protein [Ricinus communis]
            gi|223531969|gb|EEF33782.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 358

 Score =  280 bits (717), Expect = 6e-73
 Identities = 152/283 (53%), Positives = 184/283 (65%), Gaps = 7/283 (2%)
 Frame = -3

Query: 1193 DWEDATCSVCMEYPHNAVLLLCSSHEKGCRPYMCGTSYRHSNCLDQFKKAYTKVASPPHG 1014
            DWED TCSVCME PHNAVLLLCSSH+KGCRPYMCGTS+R+SNCLDQ+KKAYTKV S    
Sbjct: 47   DWEDVTCSVCMECPHNAVLLLCSSHDKGCRPYMCGTSFRYSNCLDQYKKAYTKVTSS--- 103

Query: 1013 HGNLWHELANNSSVGFGSGVHAEKCEVMELACPLCRGQVKGMTVVEPARKYLDAKKRSCT 834
                 +  A+NS +   SG   +KCEV ELACPLCRGQVKG TVVEPAR YL+AK+RSC 
Sbjct: 104  -----NGTADNSILLSDSGWPVDKCEVTELACPLCRGQVKGWTVVEPARDYLNAKRRSCM 158

Query: 833  QDCCSFTGTYKELRKHVKQEHPSARPREVDPIXXXXXXXXXXXXEYDDVLSTIHATTPGA 654
            QD CSF GT+KELRKH++  HPSARPREVDP+            E+DDV+STI +T PGA
Sbjct: 159  QDDCSFVGTFKELRKHMRTAHPSARPREVDPMLEQKWRRLEREREHDDVISTIRSTMPGA 218

Query: 653  RVFGDYVIE-DHYGFXXXXXXXXXXXDF----GGSELGISDPIFNIFLMYQAYNAGNASL 489
             VFGDYVIE +++GF           D     GG ++G    + N+FL+  A+      L
Sbjct: 219  MVFGDYVIEGNNHGFDSDEENGGFDADAAERNGGLDVGFDRNLVNVFLLLHAFGPSGDGL 278

Query: 488  QSRLRR-QRAYSHTMNEIGRRNVGI-PAVTTASGEDASDGGND 366
              RLR+ +R+     NE       + P     S +D +DG ND
Sbjct: 279  SRRLRQPERSSYRASNESATDTHHVSPVNGLNSSDDDNDGDND 321


>dbj|BAE48661.1| Pm27 [Prunus mume]
          Length = 362

 Score =  278 bits (712), Expect = 2e-72
 Identities = 151/283 (53%), Positives = 185/283 (65%), Gaps = 6/283 (2%)
 Frame = -3

Query: 1193 DWEDATCSVCMEYPHNAVLLLCSSHEKGCRPYMCGTSYRHSNCLDQFKKAYTKVASPPHG 1014
            DW+DATCSVCMEYPHNAVLLLCSSH+KGCRPYMCGTS+RHSNCL Q+KKAYTK+ S  HG
Sbjct: 46   DWDDATCSVCMEYPHNAVLLLCSSHDKGCRPYMCGTSFRHSNCLGQYKKAYTKMVSSDHG 105

Query: 1013 HGNLWHELANNSSVGFGSGVHAEKCEVMELACPLCRGQVKGMTVVEPARKYLDAKKRSCT 834
               L  +  NN  V   S   A+KCEV ELACPLCRG+VKG TV+EPAR YL+AKKRSC 
Sbjct: 106  QPLLGSD--NNPIVLPDSEWPAQKCEVSELACPLCRGKVKGWTVLEPARDYLNAKKRSCM 163

Query: 833  QDCCSFTGTYKELRKHVKQEHPSARPREVDPIXXXXXXXXXXXXEYDDVLSTIHATTPGA 654
            Q+ CSF G YKEL++HV+ EHPSARPREVDP+            E DDV+STI ++ PGA
Sbjct: 164  QENCSFVGNYKELKRHVRAEHPSARPREVDPVLEQKWRRLEHERETDDVISTIQSSMPGA 223

Query: 653  RVFGDYVIE-DHYGFXXXXXXXXXXXDF----GGSELGISDPIFNIFLMYQAYNAGNASL 489
             VFGDYVIE ++YGF           +     GG  LG    + N+F +  A+ +     
Sbjct: 224  MVFGDYVIEGNNYGFDTDEEDGGFDAEAGERNGGFGLGFDGNLVNVFFLLHAFGSSGT-- 281

Query: 488  QSRLRR-QRAYSHTMNEIGRRNVGIPAVTTASGEDASDGGNDD 363
              RLR+ +RA  H  +      VGI   +   G D+SD  +++
Sbjct: 282  -GRLRQPERALHHPSDGSA---VGIRHSSPIGGSDSSDQDDEN 320


>ref|XP_004139810.1| PREDICTED: uncharacterized protein LOC101208946 [Cucumis sativus]
            gi|449492613|ref|XP_004159048.1| PREDICTED:
            uncharacterized LOC101208946 [Cucumis sativus]
          Length = 364

 Score =  273 bits (698), Expect = 1e-70
 Identities = 148/282 (52%), Positives = 181/282 (64%), Gaps = 6/282 (2%)
 Frame = -3

Query: 1190 WEDATCSVCMEYPHNAVLLLCSSHEKGCRPYMCGTSYRHSNCLDQFKKAYTKVASPPHGH 1011
            WED+TCSVCMEYPHNAVLLLCSSH+KGCRPYMCGTS R+SNCLDQ+KKAYTKV S    +
Sbjct: 47   WEDSTCSVCMEYPHNAVLLLCSSHDKGCRPYMCGTSLRYSNCLDQYKKAYTKVISS--NN 104

Query: 1010 GNLWHELANNSSVGFGSGVHAEKCEVMELACPLCRGQVKGMTVVEPARKYLDAKKRSCTQ 831
                    +N  V     +  E  E  ELACPLCRGQVKG TVVEPAR+YL+AKKR+C Q
Sbjct: 105  AQTVSASIDNPGVVQDPSLLGENHEATELACPLCRGQVKGWTVVEPAREYLNAKKRTCMQ 164

Query: 830  DCCSFTGTYKELRKHVKQEHPSARPREVDPIXXXXXXXXXXXXEYDDVLSTIHATTPGAR 651
            D C+F G YKELRKHV+ EHPSARPREVDP+            E +DV+STI +T PGA 
Sbjct: 165  DSCTFVGNYKELRKHVRSEHPSARPREVDPVLEQKWRSLERERERNDVMSTIRSTMPGAV 224

Query: 650  VFGDYVIE-DHYGFXXXXXXXXXXXDF----GGSELGISDPIFNIFLMYQAYNAGNASLQ 486
            VFGDYVIE +++GF           +      G E+G    + N+FL+  A+   +  L 
Sbjct: 225  VFGDYVIEGNNFGFDSDEEDGGLNANSAERNAGFEVGFDSNLVNMFLLLHAFGPSSGDLN 284

Query: 485  SRLRR-QRAYSHTMNEIGRRNVGIPAVTTASGEDASDGGNDD 363
             RLR+ +R +S   NE      GIP  T  S  D+ + G+D+
Sbjct: 285  RRLRQPERIFSPRSNE---GVAGIPNTTPLSSFDSINEGSDN 323


>ref|XP_002304076.1| predicted protein [Populus trichocarpa] gi|222841508|gb|EEE79055.1|
            predicted protein [Populus trichocarpa]
          Length = 360

 Score =  268 bits (686), Expect = 2e-69
 Identities = 148/284 (52%), Positives = 168/284 (59%), Gaps = 7/284 (2%)
 Frame = -3

Query: 1193 DWEDATCSVCMEYPHNAVLLLCSSHEKGCRPYMCGTSYRHSNCLDQFKKAYTKVASPPHG 1014
            DW D TCSVCME PHNAVLLLCSSH+KGCRPYMCGTS+R+SNCLDQ+K AYTK+ S    
Sbjct: 47   DWVDVTCSVCMECPHNAVLLLCSSHDKGCRPYMCGTSFRYSNCLDQYKNAYTKIISSTG- 105

Query: 1013 HGNLWHELANNSSVGFGSGVHAEKCEVMELACPLCRGQVKGMTVVEPARKYLDAKKRSCT 834
                    A N  +   S    EKCE  ELACPLCRGQVKG TVVEPAR+YL+AKKRSC 
Sbjct: 106  -------TAENPILVSDSSQPVEKCEATELACPLCRGQVKGWTVVEPAREYLNAKKRSCM 158

Query: 833  QDCCSFTGTYKELRKHVKQEHPSARPREVDPIXXXXXXXXXXXXEYDDVLSTIHATTPGA 654
            QD CSF GTYKELRKHVK  HPSARPR VDPI            E+DDV+STI +T PGA
Sbjct: 159  QDDCSFIGTYKELRKHVKTNHPSARPRAVDPILEQKWRRLEREREHDDVISTIRSTMPGA 218

Query: 653  RVFGDYVIE-DHYGFXXXXXXXXXXXDF---GGSELGISDPIFNIFLMYQAYNAGNASLQ 486
             VFGDYVIE  HYGF                 G E+G    + N+FL+  A+        
Sbjct: 219  MVFGDYVIEGSHYGFDTDEDGGFDADATERNEGFEVGFDRNLVNVFLLLHAFGPTGDDHS 278

Query: 485  SRLRRQRAYSHTMNE---IGRRNVGIPAVTTASGEDASDGGNDD 363
             RLR        M +   +   +         S ED  +  NDD
Sbjct: 279  RRLRHPERTDRQMTDESAVSFHHTSPVEGLGLSDEDDDNNINDD 322


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