BLASTX nr result
ID: Coptis25_contig00002260
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002260 (2459 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002525006.1| RNA-binding protein with multiple splicing, ... 368 4e-99 ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-... 366 1e-98 ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotei... 364 5e-98 emb|CAD33925.1| proline rich protein 3 [Cicer arietinum] 354 7e-95 ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817... 352 4e-94 >ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus communis] gi|223535714|gb|EEF37378.1| RNA-binding protein with multiple splicing, putative [Ricinus communis] Length = 337 Score = 368 bits (945), Expect = 4e-99 Identities = 194/342 (56%), Positives = 223/342 (65%) Frame = +3 Query: 108 MAGTGIHPFHHQWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 287 MAG GIHP+HHQ Sbjct: 1 MAGAGIHPYHHQ-----QWPPAAAPPPPPAAAGGAAPPPPSAVHHPPTVLVDNSNRGPTH 55 Query: 288 DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 467 DE+RTIFI+GLP DVKERELQNLLRWLPGYEASQVN+K E PMGFALFS+S FAIAA++A Sbjct: 56 DEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTSQFAIAAKEA 115 Query: 468 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 647 LQDM+FDAESK++LHTEMAKKNLFVKRG+VAD N+ DQSKRLRTGGDY+HT Sbjct: 116 LQDMLFDAESKSILHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTAYTTPSPFH 175 Query: 648 XXXXXVWGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNTL 827 VWG S Y PVQN+KDNPPCNTL Sbjct: 176 PPPAPVWGPHGYMAPAPPPYDPYAGYPVPQVPMPAPAPMPAPSSYLPVQNTKDNPPCNTL 235 Query: 828 FIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVI 1007 FIGNLGEN+ E+ELR LFS QPGFKQMK+LRQER+TVCFIEF+D++SA+ VH++LQGAVI Sbjct: 236 FIGNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDVNSASNVHRSLQGAVI 295 Query: 1008 PSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAPLQTTFK 1133 PSSG GMRIQYSKNPFG+RKDG ++ P ANGAP T++ Sbjct: 296 PSSGSVGMRIQYSKNPFGKRKDGSHSVASPSANGAPPAMTYQ 337 >ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera] Length = 328 Score = 366 bits (940), Expect = 1e-98 Identities = 196/342 (57%), Positives = 218/342 (63%) Frame = +3 Query: 108 MAGTGIHPFHHQWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 287 MAG GIHP+H QW Sbjct: 1 MAGAGIHPYHQQWPPAPAPQPSAPGAPPAPAHPPPILVENPNRPNS-------------- 46 Query: 288 DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 467 DE+RTIFISGLP DVKERELQNLLRWLPGYEASQVNFK E PMGFALFS+ A+AA+DA Sbjct: 47 DEVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDA 106 Query: 468 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 647 LQ+MVFDAESK+VLHTEMAKKNLFVKRG+VAD ++ DQSKRLRTGGDYTHTG Sbjct: 107 LQEMVFDAESKSVLHTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSSPSPFH 166 Query: 648 XXXXXVWGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNTL 827 VWG S Y PVQN+KDNPPCNTL Sbjct: 167 PPPAPVWGPHGYMAPAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTL 226 Query: 828 FIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVI 1007 FIGNLGEN+ EEELR LFS QPGFKQMK+LRQER+TVCFIEF+DM++AT VH +LQGAVI Sbjct: 227 FIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVI 286 Query: 1008 PSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAPLQTTFK 1133 PSSG GMRIQYSKNPFG+RKD + ANGAP T++ Sbjct: 287 PSSGSVGMRIQYSKNPFGKRKDSGHPVAVAGANGAPAPPTYQ 328 >ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis sativus] gi|449515829|ref|XP_004164950.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis sativus] Length = 335 Score = 364 bits (935), Expect = 5e-98 Identities = 194/336 (57%), Positives = 214/336 (63%) Frame = +3 Query: 108 MAGTGIHPFHHQWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 287 MAGTGIHP+H QW Sbjct: 1 MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHAS------- 53 Query: 288 DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 467 DE+RTIFI+GLP DVKERELQNLLRWLPGYEASQVNFK E PMGFALFS++ FAIAA+DA Sbjct: 54 DEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDA 113 Query: 468 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 647 LQDMVFDAESK+VLHTEMAKKNLFVKRG+VAD + DQSKRLRTGGDY HTG Sbjct: 114 LQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFH 173 Query: 648 XXXXXVWGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNTL 827 +WG S Y PVQN+KDNPPCNTL Sbjct: 174 APPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTL 233 Query: 828 FIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVI 1007 FIGNLGENV EEELR LFS QPGFKQMK+LRQER+TVCFIEF+D+++AT VH +LQGAVI Sbjct: 234 FIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVI 293 Query: 1008 PSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAP 1115 PSSG GMRIQ+SKNPFG+RKD P NG P Sbjct: 294 PSSGSVGMRIQFSKNPFGKRKDAAYPVSAPGVNGTP 329 >emb|CAD33925.1| proline rich protein 3 [Cicer arietinum] Length = 284 Score = 354 bits (908), Expect = 7e-95 Identities = 182/283 (64%), Positives = 206/283 (72%), Gaps = 1/283 (0%) Frame = +3 Query: 288 DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 467 +E+RTIFI+GLP DVKERE+QNLLRWLPG+EASQ+NFK E PMGFALFSS H AIAA+D Sbjct: 2 EEVRTIFITGLPEDVKEREIQNLLRWLPGFEASQLNFKAEKPMGFALFSSPHQAIAAKDI 61 Query: 468 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 647 LQDM+FD +SK+VLHTEMAKKNLFVKRG+ AD + DQSKRLRT GDYTHTG Sbjct: 62 LQDMLFDPDSKSVLHTEMAKKNLFVKRGIGADAVAFDQSKRLRTAGDYTHTGYVTPSPFH 121 Query: 648 XXXXXVWG-HQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNT 824 VWG H S Y PVQN+KDNPPCNT Sbjct: 122 PPPPPVWGPHGYMAPPPPPPYDPYAGYPVAPVPMPAPVSIAAPSSYVPVQNTKDNPPCNT 181 Query: 825 LFIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAV 1004 LFIGNLGEN+ EEE+R LFS QPGFKQMK+LRQER+TVCFIEF+D++SAT VH NLQGAV Sbjct: 182 LFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAV 241 Query: 1005 IPSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAPLQTTFK 1133 IPSSG GMRIQYSKNPFG+RKDG P ANGAP+ T++ Sbjct: 242 IPSSGSVGMRIQYSKNPFGKRKDGNFPMAVPGANGAPVALTYQ 284 >ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817421 [Glycine max] Length = 318 Score = 352 bits (902), Expect = 4e-94 Identities = 190/343 (55%), Positives = 216/343 (62%), Gaps = 1/343 (0%) Frame = +3 Query: 108 MAGTGIHPFHHQWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 287 MAGTGIHP+H QW Sbjct: 1 MAGTGIHPYHQQWAPAAAAPPPPPPAAAGGPPPHPG------------------------ 36 Query: 288 DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 467 +E+RTIFI+GLP DVKERELQNLLRWLPG+EASQ+NFK E PMGFALFS+ H A+ A+D Sbjct: 37 EEVRTIFITGLPEDVKERELQNLLRWLPGFEASQLNFKAEKPMGFALFSAPHQALTAKDI 96 Query: 468 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 647 LQDM+FD ++K+VLHTEMAKKNLFVKRG+ AD + DQSKRLRT GDYTHTG Sbjct: 97 LQDMLFDPDTKSVLHTEMAKKNLFVKRGIGADAGAFDQSKRLRTAGDYTHTGYTSPSPFH 156 Query: 648 XXXXXVWG-HQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNT 824 VWG H S Y PVQN+KDNPPCNT Sbjct: 157 PPPPPVWGPHGYMAPPPPPPYDPYAGYPVAPVPMPTPAPIAAPSTYVPVQNTKDNPPCNT 216 Query: 825 LFIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAV 1004 LFIGNLGEN+ EEE+R LFS QPGFKQMK+LRQER+TVCFIEF+D++SAT VH NLQGAV Sbjct: 217 LFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAV 276 Query: 1005 IPSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAPLQTTFK 1133 IPSSG GMRIQYSKNPFG+RKD A P ANGAP T++ Sbjct: 277 IPSSGSIGMRIQYSKNPFGKRKDNLPVA-VPSANGAPPTMTYQ 318