BLASTX nr result

ID: Coptis25_contig00002258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002258
         (1482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634177.1| PREDICTED: uncharacterized protein LOC100853...   104   5e-20
ref|XP_002521299.1| hypothetical protein RCOM_0756330 [Ricinus c...    70   1e-09

>ref|XP_003634177.1| PREDICTED: uncharacterized protein LOC100853355 [Vitis vinifera]
            gi|302143995|emb|CBI23100.3| unnamed protein product
            [Vitis vinifera]
          Length = 1167

 Score =  104 bits (260), Expect = 5e-20
 Identities = 138/578 (23%), Positives = 217/578 (37%), Gaps = 87/578 (15%)
 Frame = +1

Query: 1    NLSPLAPPFTVDPSFPGPRPNSWGQHDPYFVDPYYGFATRPPRDNWQHINPPTSMPNSFP 180
            NLS LAPPFTVD     P  N        F +  Y         NW H   P S P+ F 
Sbjct: 17   NLSALAPPFTVDRPVSKPLSNPLVN----FTESTYAAPFNSSLHNWVHPQSPVSRPDYFS 72

Query: 181  TPNLSPTGSSSVGVNPSCPTGFSPVTAYGQPVTDF----YAPQSIGRSP----------- 315
             PN +     + GV PS    +S       PV       +    I   P           
Sbjct: 73   NPNSAVDSVQATGVPPSNAYRYSVSQPVNSPVVHLPPLSHIVSGIAHLPPLSPIVSAGTD 132

Query: 316  ------------------QPYYPSASVP---------------------------DSSTT 360
                              +PYYP    P                           + S++
Sbjct: 133  VFSFGQCSDRMKTSLVEAKPYYPPYVAPAIEDNSPLVVLNEPNYDLLSTSHAAHLNGSSS 192

Query: 361  SDRGGNSLWGKG------GFWREMSVGEQWK---------GKDTYVGAPPSYASLFNQGI 495
             D    S+ G        GFW  ++  EQ K          K++       Y S  NQG 
Sbjct: 193  LDDYTQSMSGLEYPSRWCGFWNGLADIEQGKKVELDESLCSKESNFVGSSIYRSYINQGD 252

Query: 496  LATDGLPACEQPSNVWVGKSVESLEGKHDAVSKGILDCTLSSVSDENSWDDPFNKSRTSV 675
               +G+   E+ S +   K V+ L G+ + V     D      ++++ ++   N    S+
Sbjct: 253  PTAEGVSNSEEGSVLSDRKYVDIL-GRDNCVGSLSPD----HFNNKSFYEPKANPMVVSL 307

Query: 676  SSPASPH--------EWPYQQAQSSDFLMDSWSQLNPSTTSYGGYFTGFDLNRPDPSCFY 831
              P +          E P+ +A S + + +SW+   P +  Y   F   D    DP    
Sbjct: 308  DFPRTSFLGSTSVLPETPHPRAPSLEPVTNSWNYRKPQSALYEKCFRKIDSCVDDPV--- 364

Query: 832  PASSKSCVDQIYEPPSITSSSTKLMNRTTSSNVTPIERPRDTFDRRGTSGRHNAS-KTGC 1008
             + +KS    +  PP+ + SS  + N  +S N+        T +    SG H ++ +   
Sbjct: 365  -SKAKSSPAIVIRPPANSPSSLGV-NSFSSRNMIC------TDNSENVSGHHLSNMEEPH 416

Query: 1009 IQMNGQDCEVYGDTGR-NKSGLEGDHTCVEPLLIKKIVPSQHNLSVCVDTLKHLSSGKNK 1185
            I +  +  E+Y DT + N      DH  +E    KK      N  + V    +L   +++
Sbjct: 417  IPVISEGRELYSDTSQLNGHWQRNDHLSMESSSTKK--HELLNNEMGVKETDNLLRARSE 474

Query: 1186 EQLTDLDLPGTFVTAETG--AGNPVERSSEVLEQVNPAVDSPCWKGASDSRYSLFGAAEP 1359
             Q+  L++   F  +     A N ++ +SE L+  NPAVDSPCWKG+  S +S F  +E 
Sbjct: 475  LQIPHLNVEDGFSFSPNSIEAVNSIDNTSETLDHYNPAVDSPCWKGSITSHFSPFEVSEA 534

Query: 1360 ETRHVPAKISEGSNSNKLQGPEVLPVSSDKVMAFSSME 1473
             + H   +  E  +   LQG  + P++SD  +  SS++
Sbjct: 535  LSPHNLMEQLEALDGFNLQGHHIFPLNSDDAVNVSSLK 572


>ref|XP_002521299.1| hypothetical protein RCOM_0756330 [Ricinus communis]
            gi|223539484|gb|EEF41073.1| hypothetical protein
            RCOM_0756330 [Ricinus communis]
          Length = 1125

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 124/516 (24%), Positives = 176/516 (34%), Gaps = 28/516 (5%)
 Frame = +1

Query: 1    NLSPLAPPFTVDPSFPGP-----RPNSWGQHDPYFVDPYYGFATRPPRDNWQHINPPTSM 165
            NLS LAPPFTVD S P P      P S+      +V+P+       P  ++  I  P   
Sbjct: 43   NLSALAPPFTVDRSVPKPLVDLTEPTSYHHSLHNWVNPHQ------PEFDYFVIQKPELD 96

Query: 166  PNSFPTPNLSPTGSSSVGVNPSCPTGFSPVTAYGQPVTDFYAPQSIGRSPQPYYPSASV- 342
             NS+   + S     SV  + S   G S VT               G   +PYYPS  + 
Sbjct: 97   SNSYNRYSASSNPHVSVSTD-SVLYGQSGVT---------------GLEAKPYYPSTYIS 140

Query: 343  PDSSTTSDRGGNSLWGKGGFWREMSVGEQWKGKDTYVGAPPSYA-SLFNQGILATDGLPA 519
            P        GG       G      V        T +G+   Y  SL  Q     DGL  
Sbjct: 141  PAIGNDCSLGGVPHHSDYGLLSASRVS-------TSIGSSEDYTQSLSGQWSGMWDGLTD 193

Query: 520  CEQPSNVWVGKSVESLEGKHDAVSKGILDCTLSSVSDENSWDDPFN-------------- 657
              Q   V +  S  S E   + V+      + S      S D                  
Sbjct: 194  WLQSEQVQLDGSFCSKETYMNQVAGLYASESTSKYEASQSADTVGRETQIESAGVGKLDY 253

Query: 658  KSRTSVSSPASPHEWPYQQAQSSDFLMDSWSQLNPSTTSYGGYFTGFDLNRPDPSCF--Y 831
            KS    +   +P ++P   + +S  L+       PS  +   +      +  +  C   +
Sbjct: 254  KSFLGENRKFTPSDYPTPSSLASTLLVPETCSQVPSKKAVNSWNHHMPYSASNEKCLRRH 313

Query: 832  PASSKSCVDQIYEPPSIT-----SSSTKLMNRTTSSNVTPIERPRDTFDRRGTSGRHNAS 996
             A+S      +Y  P++       +   L N  TSS+        D  D    S      
Sbjct: 314  DATSSDIATILYSSPAVVIKPPEHNKGSLKNVNTSSD-------GDNKDFSCNSPSVVVE 366

Query: 997  KTGCIQMNGQDCEVYGDTGRNKSGLEGDHTCVEPLLIKKIVPSQHNLSVCVDTLKHLSSG 1176
                I   G  C    D  +    L      +      K      N +  +D   H +  
Sbjct: 367  PRPFITSKGSVCY---DASQVSFHLGKTDQVIANFSSAKNEELSSNQNASMDVSGHFAGE 423

Query: 1177 KNKEQLTDLDLPGTFVTAETGAGNPVERSSEVLEQVNPAVDSPCWKGASDSRYSLFGAAE 1356
            K   Q+    L G  +  +  A +P +  +E L+  NPAVDSPCWKGA  S +S    +E
Sbjct: 424  KPVIQVPCTSLGGISLVDKNEAIDPAKNHTESLDHYNPAVDSPCWKGAPVSNFSQLEVSE 483

Query: 1357 PETRHVPAKISEGSNSNKLQGPEVLPVSSDKVMAFS 1464
              T      +   S SN  QG +   VSSD  +  S
Sbjct: 484  AVTPQNMKNLEACSGSNH-QGYQTFSVSSDDAVKVS 518


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