BLASTX nr result

ID: Coptis25_contig00002243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002243
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523194.1| conserved hypothetical protein [Ricinus comm...   239   4e-61
ref|XP_002298892.1| predicted protein [Populus trichocarpa] gi|6...   236   5e-60
ref|XP_002332526.1| predicted protein [Populus trichocarpa] gi|6...   234   2e-59
gb|ABK93277.1| unknown [Populus trichocarpa]                          234   2e-59
ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein H...   231   9e-59

>ref|XP_002523194.1| conserved hypothetical protein [Ricinus communis]
            gi|223537601|gb|EEF39225.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 771

 Score =  239 bits (610), Expect = 4e-61
 Identities = 116/133 (87%), Positives = 123/133 (92%)
 Frame = -2

Query: 723  TGIELLQLDLSAGDALLKQLWRHSDAIMCCSLQTNASPVFTFANQAGLDMLETTLVALQD 544
            TG EL ++D  AGDALLKQLW HSDAIMCCSL+TNASPVFTFANQAGLDMLETTLVALQD
Sbjct: 639  TGGELFRVDPQAGDALLKQLWHHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLVALQD 698

Query: 543  IMLDKILNEAGRKTLCSEFSKIMQQGFCRLPAGICVSSMGRSVSYQQAIAWKVLNEDDSN 364
            IMLDKIL+EAGRK LCSEFSKIMQQGF  LPAGICVSSMGR VSY QAIAWKVLN+DDSN
Sbjct: 699  IMLDKILDEAGRKVLCSEFSKIMQQGFAYLPAGICVSSMGRPVSYDQAIAWKVLNDDDSN 758

Query: 363  HCLAFMFMNWAFI 325
            HCLAFMFMNW+F+
Sbjct: 759  HCLAFMFMNWSFV 771


>ref|XP_002298892.1| predicted protein [Populus trichocarpa] gi|60327627|gb|AAX19053.1|
            class III HD-Zip protein 4 [Populus trichocarpa]
            gi|222846150|gb|EEE83697.1| predicted protein [Populus
            trichocarpa]
          Length = 844

 Score =  236 bits (601), Expect = 5e-60
 Identities = 113/133 (84%), Positives = 123/133 (92%)
 Frame = -2

Query: 723  TGIELLQLDLSAGDALLKQLWRHSDAIMCCSLQTNASPVFTFANQAGLDMLETTLVALQD 544
            TG EL +++  AGDALLKQLW HSDAIMCCSL+TNASPVFTFANQAGLDMLETTLVALQD
Sbjct: 712  TGGELFRVESQAGDALLKQLWHHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLVALQD 771

Query: 543  IMLDKILNEAGRKTLCSEFSKIMQQGFCRLPAGICVSSMGRSVSYQQAIAWKVLNEDDSN 364
            IMLDKIL+EAGRK LCSEFSKI QQGF  LPAGICVSSMGR VSY+QA+AWKVLN+DDSN
Sbjct: 772  IMLDKILDEAGRKILCSEFSKITQQGFAYLPAGICVSSMGRPVSYEQAVAWKVLNDDDSN 831

Query: 363  HCLAFMFMNWAFI 325
            HCLAFMFMNW+F+
Sbjct: 832  HCLAFMFMNWSFV 844


>ref|XP_002332526.1| predicted protein [Populus trichocarpa] gi|60327625|gb|AAX19052.1|
            class III HD-Zip protein 3 [Populus trichocarpa]
            gi|222832638|gb|EEE71115.1| predicted protein [Populus
            trichocarpa]
          Length = 843

 Score =  234 bits (596), Expect = 2e-59
 Identities = 112/133 (84%), Positives = 124/133 (93%)
 Frame = -2

Query: 723  TGIELLQLDLSAGDALLKQLWRHSDAIMCCSLQTNASPVFTFANQAGLDMLETTLVALQD 544
            TG EL ++D  AGDALLK+LW HSDAIMCCSL+TNASPVFTFANQAGLDMLETTLVALQD
Sbjct: 711  TGGELFRVDSQAGDALLKRLWHHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLVALQD 770

Query: 543  IMLDKILNEAGRKTLCSEFSKIMQQGFCRLPAGICVSSMGRSVSYQQAIAWKVLNEDDSN 364
            IMLDKIL+EAGRK LCSEFSKIMQQG+  LPAGICVSSMGR VSY+QAIAWKVLN+D+SN
Sbjct: 771  IMLDKILDEAGRKILCSEFSKIMQQGYAYLPAGICVSSMGRPVSYEQAIAWKVLNDDNSN 830

Query: 363  HCLAFMFMNWAFI 325
            HCLAFMF+NW+F+
Sbjct: 831  HCLAFMFINWSFV 843


>gb|ABK93277.1| unknown [Populus trichocarpa]
          Length = 294

 Score =  234 bits (596), Expect = 2e-59
 Identities = 112/133 (84%), Positives = 124/133 (93%)
 Frame = -2

Query: 723 TGIELLQLDLSAGDALLKQLWRHSDAIMCCSLQTNASPVFTFANQAGLDMLETTLVALQD 544
           TG EL ++D  AGDALLK+LW HSDAIMCCSL+TNASPVFTFANQAGLDMLETTLVALQD
Sbjct: 162 TGGELFRVDSQAGDALLKRLWHHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLVALQD 221

Query: 543 IMLDKILNEAGRKTLCSEFSKIMQQGFCRLPAGICVSSMGRSVSYQQAIAWKVLNEDDSN 364
           IMLDKIL+EAGRK LCSEFSKIMQQG+  LPAGICVSSMGR VSY+QAIAWKVLN+D+SN
Sbjct: 222 IMLDKILDEAGRKILCSEFSKIMQQGYAYLPAGICVSSMGRPVSYEQAIAWKVLNDDNSN 281

Query: 363 HCLAFMFMNWAFI 325
           HCLAFMF+NW+F+
Sbjct: 282 HCLAFMFINWSFV 294


>ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 2
            [Vitis vinifera]
          Length = 859

 Score =  231 bits (590), Expect = 9e-59
 Identities = 111/133 (83%), Positives = 122/133 (91%)
 Frame = -2

Query: 723  TGIELLQLDLSAGDALLKQLWRHSDAIMCCSLQTNASPVFTFANQAGLDMLETTLVALQD 544
            TG ELL++D   GDA+LK LW HSDAIMCCSL+TNASPVFTFANQAGLDMLETTLVALQD
Sbjct: 727  TGGELLRVDSQGGDAVLKLLWNHSDAIMCCSLKTNASPVFTFANQAGLDMLETTLVALQD 786

Query: 543  IMLDKILNEAGRKTLCSEFSKIMQQGFCRLPAGICVSSMGRSVSYQQAIAWKVLNEDDSN 364
            IMLDKIL+EAGRK LCSEFSKIMQQGF  LPAGIC SSMGR VSY+QAIAWKVLN++DSN
Sbjct: 787  IMLDKILDEAGRKILCSEFSKIMQQGFAYLPAGICTSSMGRPVSYEQAIAWKVLNDEDSN 846

Query: 363  HCLAFMFMNWAFI 325
            HCLAFMF+NW+F+
Sbjct: 847  HCLAFMFINWSFV 859


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