BLASTX nr result

ID: Coptis25_contig00002235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002235
         (1286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269010.2| PREDICTED: hsp70 nucleotide exchange factor ...   249   6e-96
ref|XP_002512713.1| sil1, putative [Ricinus communis] gi|2235486...   231   2e-88
emb|CBI29304.3| unnamed protein product [Vitis vinifera]              249   7e-88
ref|XP_002297899.1| predicted protein [Populus trichocarpa] gi|2...   227   7e-87
ref|XP_004140659.1| PREDICTED: nucleotide exchange factor SIL1-l...   225   2e-86

>ref|XP_002269010.2| PREDICTED: hsp70 nucleotide exchange factor FES1 [Vitis vinifera]
          Length = 395

 Score =  249 bits (635), Expect(2) = 6e-96
 Identities = 131/215 (60%), Positives = 163/215 (75%)
 Frame = +2

Query: 509  VIRELNTSDQQMRIISAWILGMASQNNPVVQNQILDLGALKKLIKMANSSSAEEATKALY 688
            VIREL+  D ++R  SAWILG ASQNNPVVQ Q+L+LGAL KL+KM NSS  EEATKALY
Sbjct: 173  VIRELDNPDPEIRKTSAWILGKASQNNPVVQKQVLELGALPKLMKMVNSSFVEEATKALY 232

Query: 689  AIAALIRNSIDGQTLFYAEAGELMLQDIMSSSSVDIRLKKKAASLVADLANFQLESKNKA 868
            A++ALIRN++  Q LFYA+AG+LMLQDI+S+ S+DIRL++K   LV DLA  QLES +KA
Sbjct: 233  AVSALIRNNLAAQELFYAKAGDLMLQDILSNPSIDIRLRRKTVFLVGDLAECQLESTHKA 292

Query: 869  GXXXXXXXXXXXXVVDLTTFTDVDLQEKALVAIKNLLQLNASEALDFRDFCGFDKVLESM 1048
                         VVDLT  +D+DLQEKAL+A+KNLLQL  +EAL F+D+C  D  LE M
Sbjct: 293  ELPFFSNRHFLKSVVDLTASSDLDLQEKALIAVKNLLQLRTTEALVFKDYCDLDGALERM 352

Query: 1049 REQLRQLMTVEDQSDFLLDMESLLGDVELIFQKKL 1153
            R+QL+QLM  E Q D+++D+ESL  +VELIF KKL
Sbjct: 353  RKQLQQLMDEEYQRDYVMDLESLCREVELIFHKKL 387



 Score =  130 bits (326), Expect(2) = 6e-96
 Identities = 66/119 (55%), Positives = 85/119 (71%), Gaps = 14/119 (11%)
 Frame = +3

Query: 141 DSNNTGQMYWASAKEEGD--------------SPEDEFDGGFSSLESMLQWSIGHADPIK 278
           + +++G ++W++AKEEGD              +   + DGGFSSL+ MLQW+IGH+DP K
Sbjct: 29  NKSSSGGLFWSTAKEEGDLMRKSEAQESTVGVNDNADLDGGFSSLDGMLQWAIGHSDPTK 88

Query: 279 LKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSLSLEQHLRA 455
           LKE A+D Q  S ++LKKRQ EIKELME LK PSDA+LM+ AIADLNNSSL +E H RA
Sbjct: 89  LKETAQDVQRFSPNELKKRQMEIKELMEKLKMPSDAQLMQIAIADLNNSSLPMEDHHRA 147


>ref|XP_002512713.1| sil1, putative [Ricinus communis] gi|223548674|gb|EEF50165.1| sil1,
            putative [Ricinus communis]
          Length = 395

 Score =  231 bits (589), Expect(2) = 2e-88
 Identities = 124/215 (57%), Positives = 152/215 (70%)
 Frame = +2

Query: 509  VIRELNTSDQQMRIISAWILGMASQNNPVVQNQILDLGALKKLIKMANSSSAEEATKALY 688
            +IRELN  D  +R ISAW+LG ASQNNP VQ Q+L++GAL KL++M  S+ AEE  KALY
Sbjct: 173  LIRELNHPDSNIRRISAWVLGKASQNNPFVQKQVLEMGALNKLMQMVKSNCAEEGIKALY 232

Query: 689  AIAALIRNSIDGQTLFYAEAGELMLQDIMSSSSVDIRLKKKAASLVADLANFQLESKNKA 868
            A++ALIRN++ GQ LFYAEAG+ MLQ+I+  SS DIRL++KA  LVADLA  QLE+  +A
Sbjct: 233  AVSALIRNNLAGQELFYAEAGDQMLQEILGDSSTDIRLRRKAVFLVADLAECQLENVGRA 292

Query: 869  GXXXXXXXXXXXXVVDLTTFTDVDLQEKALVAIKNLLQLNASEALDFRDFCGFDKVLESM 1048
                         VVDL + TD+DLQEKALVA+KNLLQL   EA   +DFCG D  LE M
Sbjct: 293  ELPFFSNRFFLKSVVDLVSSTDLDLQEKALVAVKNLLQLKTIEASVIKDFCGLDGALERM 352

Query: 1049 REQLRQLMTVEDQSDFLLDMESLLGDVELIFQKKL 1153
            R+QL  LMT E   D+  D+ESL  +VELIF  KL
Sbjct: 353  RQQLHVLMTQETYRDYATDIESLRREVELIFYSKL 387



 Score =  122 bits (307), Expect(2) = 2e-88
 Identities = 64/126 (50%), Positives = 83/126 (65%), Gaps = 17/126 (13%)
 Frame = +3

Query: 129 ESVNDSNNTGQMYWASAKEEGD-----------------SPEDEFDGGFSSLESMLQWSI 257
           E +N S+++  ++W++ KEE D                 +  D  DGGFSSL+ MLQW++
Sbjct: 22  ERLNKSSSSSGVFWSTVKEESDLLRKAEPDEDPSAAAVVNDHDHLDGGFSSLDGMLQWAV 81

Query: 258 GHADPIKLKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSLSL 437
           GH+DP KLKE A+D + LS +DLK RQ EIKELM+ LK PSDA LM+ AI DL+NSSL L
Sbjct: 82  GHSDPEKLKETAQDVRRLSPTDLKNRQLEIKELMDELKMPSDAHLMQNAINDLSNSSLPL 141

Query: 438 EQHLRA 455
           E H RA
Sbjct: 142 EDHHRA 147


>emb|CBI29304.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  249 bits (635), Expect(2) = 7e-88
 Identities = 131/215 (60%), Positives = 163/215 (75%)
 Frame = +2

Query: 509  VIRELNTSDQQMRIISAWILGMASQNNPVVQNQILDLGALKKLIKMANSSSAEEATKALY 688
            VIREL+  D ++R  SAWILG ASQNNPVVQ Q+L+LGAL KL+KM NSS  EEATKALY
Sbjct: 98   VIRELDNPDPEIRKTSAWILGKASQNNPVVQKQVLELGALPKLMKMVNSSFVEEATKALY 157

Query: 689  AIAALIRNSIDGQTLFYAEAGELMLQDIMSSSSVDIRLKKKAASLVADLANFQLESKNKA 868
            A++ALIRN++  Q LFYA+AG+LMLQDI+S+ S+DIRL++K   LV DLA  QLES +KA
Sbjct: 158  AVSALIRNNLAAQELFYAKAGDLMLQDILSNPSIDIRLRRKTVFLVGDLAECQLESTHKA 217

Query: 869  GXXXXXXXXXXXXVVDLTTFTDVDLQEKALVAIKNLLQLNASEALDFRDFCGFDKVLESM 1048
                         VVDLT  +D+DLQEKAL+A+KNLLQL  +EAL F+D+C  D  LE M
Sbjct: 218  ELPFFSNRHFLKSVVDLTASSDLDLQEKALIAVKNLLQLRTTEALVFKDYCDLDGALERM 277

Query: 1049 REQLRQLMTVEDQSDFLLDMESLLGDVELIFQKKL 1153
            R+QL+QLM  E Q D+++D+ESL  +VELIF KKL
Sbjct: 278  RKQLQQLMDEEYQRDYVMDLESLCREVELIFHKKL 312



 Score =  103 bits (256), Expect(2) = 7e-88
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = +3

Query: 240 MLQWSIGHADPIKLKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLN 419
           MLQW+IGH+DP KLKE A+D Q  S ++LKKRQ EIKELME LK PSDA+LM+ AIADLN
Sbjct: 1   MLQWAIGHSDPTKLKETAQDVQRFSPNELKKRQMEIKELMEKLKMPSDAQLMQIAIADLN 60

Query: 420 NSSLSLEQHLRA 455
           NSSL +E H RA
Sbjct: 61  NSSLPMEDHHRA 72


>ref|XP_002297899.1| predicted protein [Populus trichocarpa] gi|222845157|gb|EEE82704.1|
            predicted protein [Populus trichocarpa]
          Length = 400

 Score =  227 bits (579), Expect(2) = 7e-87
 Identities = 123/217 (56%), Positives = 153/217 (70%)
 Frame = +2

Query: 503  AAVIRELNTSDQQMRIISAWILGMASQNNPVVQNQILDLGALKKLIKMANSSSAEEATKA 682
            A VI+EL+  D  +R +SAW+LG A QNN  VQ QIL+LGAL KLIKM  SSS EEA KA
Sbjct: 176  AIVIQELDHPDHDIRRLSAWVLGKACQNNAAVQKQILELGALSKLIKMVKSSSIEEAIKA 235

Query: 683  LYAIAALIRNSIDGQTLFYAEAGELMLQDIMSSSSVDIRLKKKAASLVADLANFQLESKN 862
            LYA++ LI+N + GQ  FYAE G+ MLQ+I+S+SS DIRL +KA S+VADLA +QLE+  
Sbjct: 236  LYAVSTLIQNHLAGQEFFYAEDGDAMLQEILSNSSNDIRLLRKAVSVVADLAEYQLENII 295

Query: 863  KAGXXXXXXXXXXXXVVDLTTFTDVDLQEKALVAIKNLLQLNASEALDFRDFCGFDKVLE 1042
            +A             VVDLT  TD+DLQEKALVA+KNLLQL  ++AL  +D C  D  LE
Sbjct: 296  RAESPCFRNRFFLKSVVDLTASTDLDLQEKALVAVKNLLQLKTTDALVLKDLCNLDGSLE 355

Query: 1043 SMREQLRQLMTVEDQSDFLLDMESLLGDVELIFQKKL 1153
             MR QL  LM  ED  D+ +D+E+L G+VELIF +KL
Sbjct: 356  RMRRQLLDLMAEEDHRDYAVDLETLRGEVELIFHEKL 392



 Score =  121 bits (303), Expect(2) = 7e-87
 Identities = 68/128 (53%), Positives = 83/128 (64%), Gaps = 19/128 (14%)
 Frame = +3

Query: 129 ESVNDSNNTGQMYWASAKEEGD-----SPE--------------DEFDGGFSSLESMLQW 251
           E V++++ T  + W++ K+E D      PE              D+ DGGFSSLE ML W
Sbjct: 25  ELVDETSATAGLLWSTGKDEPDLLSKAEPENSDDSSAAAVVNDHDDLDGGFSSLEGMLHW 84

Query: 252 SIGHADPIKLKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSL 431
           +IGH+DP KLKE AED Q LS S+L+KRQ E+KELME +K PSDAELM  AI DLNNSS 
Sbjct: 85  AIGHSDPTKLKENAEDVQRLSASELQKRQIELKELMEKMKMPSDAELMHMAIDDLNNSSS 144

Query: 432 SLEQHLRA 455
           SLE   RA
Sbjct: 145 SLEDRQRA 152


>ref|XP_004140659.1| PREDICTED: nucleotide exchange factor SIL1-like [Cucumis sativus]
          Length = 395

 Score =  225 bits (573), Expect(2) = 2e-86
 Identities = 120/220 (54%), Positives = 155/220 (70%)
 Frame = +2

Query: 503  AAVIRELNTSDQQMRIISAWILGMASQNNPVVQNQILDLGALKKLIKMANSSSAEEATKA 682
            A + RELN  D  +R I+AWILG ASQNNP+VQ Q+L+LGAL KL+ MA S   EEA KA
Sbjct: 171  AVLTRELNHVDPDVRKIAAWILGKASQNNPIVQKQVLELGALAKLVSMAKSDFVEEAIKA 230

Query: 683  LYAIAALIRNSIDGQTLFYAEAGELMLQDIMSSSSVDIRLKKKAASLVADLANFQLESKN 862
            LYAI++L++N++ GQ LFYAEAGE+MLQDI+S+SS+DIRL+KKA  LV+DLA  QLE  +
Sbjct: 231  LYAISSLVQNNLSGQELFYAEAGEIMLQDILSNSSMDIRLQKKAVFLVSDLAVTQLEKPD 290

Query: 863  KAGXXXXXXXXXXXXVVDLTTFTDVDLQEKALVAIKNLLQLNASEALDFRDFCGFDKVLE 1042
            +A             VV+L   TD+DLQEKAL+A+KNLL L  ++A   ++FCG D  LE
Sbjct: 291  EAERPFFGDRLFLKSVVNLIHSTDIDLQEKALIALKNLLLLRTTKAQVLKEFCGLDAALE 350

Query: 1043 SMREQLRQLMTVEDQSDFLLDMESLLGDVELIFQKKLESR 1162
             MR +L+ LM  ED  D+ +D+E L   VEL F +KL  R
Sbjct: 351  RMRMKLKVLMEEEDHRDYAMDVEDLRSQVELTFLEKLGKR 390



 Score =  122 bits (306), Expect(2) = 2e-86
 Identities = 67/126 (53%), Positives = 85/126 (67%), Gaps = 20/126 (15%)
 Frame = +3

Query: 138 NDSNNTGQMYWASAKEEGD--------------------SPEDEFDGGFSSLESMLQWSI 257
           NDS+  G + W+SAK+EGD                       D FDGGFSSL+SMLQW+I
Sbjct: 23  NDSSLEG-LIWSSAKQEGDLLIDHRPQEDSSAAAAASVVHDADGFDGGFSSLDSMLQWAI 81

Query: 258 GHADPIKLKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSLSL 437
           GH+DP KLK+ A+D + LS +++KKRQEEIK+L+E LK PSDA+LM+ A+ DL NSSLSL
Sbjct: 82  GHSDPAKLKDTAQDVKRLSPNEIKKRQEEIKDLIEELKLPSDAKLMQIAVDDLKNSSLSL 141

Query: 438 EQHLRA 455
           E   RA
Sbjct: 142 EDRHRA 147


Top