BLASTX nr result

ID: Coptis25_contig00002226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002226
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270742.2| PREDICTED: uncharacterized protein LOC100241...    84   2e-14
emb|CBI34651.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002318209.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
gb|ABK96360.1| unknown [Populus trichocarpa x Populus deltoides]       81   8e-14
ref|XP_002298027.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>ref|XP_002270742.2| PREDICTED: uncharacterized protein LOC100241023 [Vitis vinifera]
          Length = 479

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/76 (55%), Positives = 50/76 (65%)
 Frame = +2

Query: 47  KASQINKLESKQEHGQEPSLTSIGSVKEFNFVNADEETSDKPPVSSDWWANEKVVAKEAG 226
           KA +    E  Q H ++ S+T +GS KEFNF NAD   SDKP +SSDWWANEKVV KE G
Sbjct: 405 KAPEDANGEEGQPHHKQRSIT-LGSAKEFNFDNADGGHSDKPNISSDWWANEKVVGKEVG 463

Query: 227 TRNGWTFFPMIQPGVS 274
               W+ F M+QP VS
Sbjct: 464 ASKNWSIFHMMQPSVS 479


>emb|CBI34651.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/76 (55%), Positives = 50/76 (65%)
 Frame = +2

Query: 47  KASQINKLESKQEHGQEPSLTSIGSVKEFNFVNADEETSDKPPVSSDWWANEKVVAKEAG 226
           KA +    E  Q H ++ S+T +GS KEFNF NAD   SDKP +SSDWWANEKVV KE G
Sbjct: 338 KAPEDANGEEGQPHHKQRSIT-LGSAKEFNFDNADGGHSDKPNISSDWWANEKVVGKEVG 396

Query: 227 TRNGWTFFPMIQPGVS 274
               W+ F M+QP VS
Sbjct: 397 ASKNWSIFHMMQPSVS 412


>ref|XP_002318209.1| predicted protein [Populus trichocarpa] gi|222858882|gb|EEE96429.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = +2

Query: 62  NKLESKQEH--GQEPSLTSIGSVKEFNFVNADEETSDKPPVSSDWWANEKVVAKEAGTRN 235
           N  E++++H   +  S+T +GS+KEFNF N+  E SDKP +SS+WWANE +  KEA   N
Sbjct: 436 NSEETEEDHVYRKHRSIT-LGSIKEFNFDNSKGEVSDKPAISSEWWANETIAGKEARPAN 494

Query: 236 GWTFFPMIQPGVS 274
            WTFFP++QP VS
Sbjct: 495 SWTFFPLLQPEVS 507


>gb|ABK96360.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 103

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = +2

Query: 62  NKLESKQEH--GQEPSLTSIGSVKEFNFVNADEETSDKPPVSSDWWANEKVVAKEAGTRN 235
           N  E++++H   +  S+T +GS+KEFNF N+  E SDKP +SS+WWANE +  KEA   N
Sbjct: 32  NSEETEEDHVYRKHRSIT-LGSIKEFNFDNSKGEVSDKPVISSEWWANETIAGKEARPAN 90

Query: 236 GWTFFPMIQPGVS 274
            WTFFP++QP VS
Sbjct: 91  SWTFFPLLQPEVS 103


>ref|XP_002298027.1| predicted protein [Populus trichocarpa] gi|222845285|gb|EEE82832.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/68 (55%), Positives = 48/68 (70%)
 Frame = +2

Query: 71  ESKQEHGQEPSLTSIGSVKEFNFVNADEETSDKPPVSSDWWANEKVVAKEAGTRNGWTFF 250
           E+  +H ++ S+T +GSVKEFNF NADE  S KP  SS+WWAN  V+ KE  T   W+FF
Sbjct: 388 EAAPQHRKQQSIT-LGSVKEFNFDNADEGDSRKPS-SSNWWANGSVIGKEGETTKNWSFF 445

Query: 251 PMIQPGVS 274
           PM+Q GVS
Sbjct: 446 PMVQSGVS 453


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