BLASTX nr result

ID: Coptis25_contig00002222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002222
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24804.1| unknown [Picea sitchensis] gi|224284540|gb|ACN400...    58   9e-07
ref|XP_003599919.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...    56   3e-06
ref|XP_003532109.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    55   5e-06
ref|XP_002278150.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    55   5e-06

>gb|ABK24804.1| unknown [Picea sitchensis] gi|224284540|gb|ACN40003.1| unknown
           [Picea sitchensis]
          Length = 538

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = -2

Query: 150 EVLNLASQLVPT*SLESKPLKGLRVGVIRETLVDGVDVGVASTIWKELLR 1
           EV + A++LVP  +L+SKPLKG+++GVIRET+ DGVD GV S+I    LR
Sbjct: 284 EVPDYAAKLVPIEALDSKPLKGIKIGVIRETMGDGVDSGVISSIQASALR 333


>ref|XP_003599919.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
           gi|355488967|gb|AES70170.1| Glutamyl-tRNA(Gln)
           amidotransferase subunit A [Medicago truncatula]
          Length = 537

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/45 (64%), Positives = 32/45 (71%)
 Frame = -2

Query: 153 QEVLNLASQLVPT*SLESKPLKGLRVGVIRETLVDGVDVGVASTI 19
           QEV N  S      SLESKPLKGLR+G+IRET+ DGVD GV S I
Sbjct: 279 QEVPNFLSHFDSASSLESKPLKGLRIGLIRETIEDGVDAGVVSAI 323


>ref|XP_003532109.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
           [Glycine max]
          Length = 543

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/45 (64%), Positives = 33/45 (73%)
 Frame = -2

Query: 153 QEVLNLASQLVPT*SLESKPLKGLRVGVIRETLVDGVDVGVASTI 19
           Q+V +  S  V   SLESKPLKGLRVG+IRET+ DGVD GV S I
Sbjct: 284 QDVPDFQSHFVAVSSLESKPLKGLRVGLIRETIDDGVDAGVISAI 328


>ref|XP_002278150.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|353558711|sp|E0CTY1.1|GATA_VITVI RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit A,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit A;
           Flags: Precursor gi|302143486|emb|CBI22047.3| unnamed
           protein product [Vitis vinifera]
          Length = 546

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -2

Query: 150 EVLNLASQLVPT*SLESKPLKGLRVGVIRETLVDGVDVGVASTI 19
           EV N  SQ +   SLESKPLKGLRVG+IRETL DGVD  V S+I
Sbjct: 288 EVPNYTSQFMSISSLESKPLKGLRVGLIRETLDDGVDKAVVSSI 331


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