BLASTX nr result
ID: Coptis25_contig00002211
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002211
(1793 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531387.1| helicase, putative [Ricinus communis] gi|223... 349 1e-93
emb|CAN65767.1| hypothetical protein VITISV_043093 [Vitis vinifera] 349 1e-93
ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity ... 348 2e-93
emb|CBI24057.3| unnamed protein product [Vitis vinifera] 348 2e-93
ref|XP_004170589.1| PREDICTED: superkiller viralicidic activity ... 343 7e-92
>ref|XP_002531387.1| helicase, putative [Ricinus communis] gi|223529017|gb|EEF31007.1|
helicase, putative [Ricinus communis]
Length = 962
Score = 349 bits (896), Expect = 1e-93
Identities = 184/250 (73%), Positives = 204/250 (81%), Gaps = 1/250 (0%)
Frame = +3
Query: 210 VTWTDYNISCRPMF*LHYLRCCMG-GLYLVVDENELFREDNFVKLQDTFIKKKLENDXXX 386
V +TD+ RP HY+ G GLYLVVDENE FREDNFVKLQDTF K+K+ +
Sbjct: 240 VVYTDF----RPTPLQHYVFPMGGVGLYLVVDENEQFREDNFVKLQDTFTKQKVGDWNKS 295
Query: 387 XXXXXXXXIAKSGTAQGGSYIYKIVKMIMECKFQPVISFSFRRRKCEQHAMSMSKLEFNT 566
IAK+G A GS IYKIVKMIME KFQPVI FSF RR+CEQHAMSMSKL+FNT
Sbjct: 296 SNGKGSGRIAKAGNASAGSDIYKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNT 355
Query: 567 DEEKEVVEQVFRNAILCLNEEDRNLPAIELMVPLLQLGIAVHHSGLLPTIKELVEFFFQE 746
EEK+VVEQVF+NAILCLNEEDR+LPAIELM+PLLQ GIAVHHSGLLP IKELVE FQE
Sbjct: 356 QEEKDVVEQVFKNAILCLNEEDRDLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQE 415
Query: 747 GPIKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHHYIGSGEYIQTSGRVGRRGKDEQC 926
G +KALFATETFAMGLNMPAKTVVFT+VKKWDGDSH YIGSGEYIQ SGR GRRGKD++
Sbjct: 416 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 475
Query: 927 ICIIMINEQV 956
ICIIMI+E++
Sbjct: 476 ICIIMIDERM 485
Score = 167 bits (422), Expect(2) = 2e-40
Identities = 84/109 (77%), Positives = 98/109 (89%)
Frame = +3
Query: 1245 G*PAPLVSTFRLSYYSILNLMSRAKGQFTAEHVIKNLFHQFQCEKALPDIGEKVAKLEQE 1424
G PAPLVSTFRLSYYSILNLM RA+GQFTAEHVIKN FHQFQ EKALPDIG+KV+KLE+E
Sbjct: 496 GKPAPLVSTFRLSYYSILNLMRRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE 555
Query: 1425 ASVLDASGEDL*AEVAEYHKIRLDIAQLEKKMLSEITEPERIIFFLVPG 1571
A+VLDASGE AEVAEYH ++L++AQLEKKM++EIT PERI+++L G
Sbjct: 556 AAVLDASGE---AEVAEYHNLKLEMAQLEKKMMAEITRPERILYYLCTG 601
Score = 26.9 bits (58), Expect(2) = 2e-40
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 1210 QMEMNTLKDMVLG 1248
+MEMNT+KDM+LG
Sbjct: 484 RMEMNTIKDMILG 496
Score = 84.0 bits (206), Expect = 1e-13
Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +1
Query: 1540 PKELSFFLF---LVKIRXXXXXXXXXXXXXXMKKSPTALGNLPSALSSRGSGYIVDTLLH 1710
P+ + ++L L+++R +KK LG LPS RG GYIVDTLLH
Sbjct: 591 PERILYYLCTGRLIRVREGGTDWGWGVVVNVVKKPAAGLGTLPS----RGGGYIVDTLLH 646
Query: 1711 CSPGSTENGSRTKPCPPRLGEKGEMHV 1791
CSP S+E+GSR +PCPPR GEKGEMHV
Sbjct: 647 CSPASSESGSRPRPCPPRPGEKGEMHV 673
>emb|CAN65767.1| hypothetical protein VITISV_043093 [Vitis vinifera]
Length = 836
Score = 349 bits (896), Expect = 1e-93
Identities = 184/250 (73%), Positives = 202/250 (80%), Gaps = 1/250 (0%)
Frame = +3
Query: 210 VTWTDYNISCRPMF*LHYLRCCMG-GLYLVVDENELFREDNFVKLQDTFIKKKLENDXXX 386
V +TD+ RP HY+ G GLYLVVDENE FREDNFVKLQD+F K+K
Sbjct: 282 VVYTDF----RPTPLQHYVFPIXGSGLYLVVDENEQFREDNFVKLQDSFTKQKQGVGSKS 337
Query: 387 XXXXXXXXIAKSGTAQGGSYIYKIVKMIMECKFQPVISFSFRRRKCEQHAMSMSKLEFNT 566
IAK G A GGS I+KIVKMIME KFQPVI FSF RR+CEQHAMSMSKL+FNT
Sbjct: 338 VNSKTSGRIAKGGNASGGSDIFKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNT 397
Query: 567 DEEKEVVEQVFRNAILCLNEEDRNLPAIELMVPLLQLGIAVHHSGLLPTIKELVEFFFQE 746
EEK+VVEQVFRNA+LCLNEEDRNLPAIELM+PLLQ GIAVHHSGLLP IKELVE FQE
Sbjct: 398 KEEKDVVEQVFRNAVLCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQE 457
Query: 747 GPIKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHHYIGSGEYIQTSGRVGRRGKDEQC 926
G +KALFATETFAMGLNMPAKTVVFT+VKKWDGDSH +IGSGEYIQ SGR GRRGKD++
Sbjct: 458 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRFIGSGEYIQMSGRAGRRGKDDRG 517
Query: 927 ICIIMINEQV 956
ICIIMI+EQ+
Sbjct: 518 ICIIMIDEQM 527
Score = 148 bits (373), Expect(2) = 4e-35
Identities = 79/109 (72%), Positives = 90/109 (82%)
Frame = +3
Query: 1245 G*PAPLVSTFRLSYYSILNLMSRAKGQFTAEHVIKNLFHQFQCEKALPDIGEKVAKLEQE 1424
G PAPLVSTFRLSYYSILNLMSRA+GQFTAEH ALPDIG+KV+KLE E
Sbjct: 538 GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH-------------ALPDIGKKVSKLEHE 584
Query: 1425 ASVLDASGEDL*AEVAEYHKIRLDIAQLEKKMLSEITEPERIIFFLVPG 1571
A++LDASGE AEVAEYHK+RLDIAQLEKKM+SEIT PER+++FL+PG
Sbjct: 585 AAMLDASGE---AEVAEYHKLRLDIAQLEKKMMSEITRPERVLYFLLPG 630
Score = 28.5 bits (62), Expect(2) = 4e-35
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 1210 QMEMNTLKDMVLG 1248
QMEMNTL+DMVLG
Sbjct: 526 QMEMNTLRDMVLG 538
>ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity 2-like 2-like [Vitis
vinifera]
Length = 995
Score = 348 bits (894), Expect = 2e-93
Identities = 184/250 (73%), Positives = 202/250 (80%), Gaps = 1/250 (0%)
Frame = +3
Query: 210 VTWTDYNISCRPMF*LHYLRCCMG-GLYLVVDENELFREDNFVKLQDTFIKKKLENDXXX 386
V +TD+ RP HY+ G GLYLVVDENE FREDNFVKLQD+F K+K
Sbjct: 244 VVYTDF----RPTPLQHYVFPIGGSGLYLVVDENEQFREDNFVKLQDSFTKQKQGVGSKS 299
Query: 387 XXXXXXXXIAKSGTAQGGSYIYKIVKMIMECKFQPVISFSFRRRKCEQHAMSMSKLEFNT 566
IAK G A GGS I+KIVKMIME KFQPVI FSF RR+CEQHAMSMSKL+FNT
Sbjct: 300 VNSKTSGRIAKGGNASGGSDIFKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNT 359
Query: 567 DEEKEVVEQVFRNAILCLNEEDRNLPAIELMVPLLQLGIAVHHSGLLPTIKELVEFFFQE 746
EEK+VVEQVFRNA+LCLNEEDRNLPAIELM+PLLQ GIAVHHSGLLP IKELVE FQE
Sbjct: 360 KEEKDVVEQVFRNAVLCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQE 419
Query: 747 GPIKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHHYIGSGEYIQTSGRVGRRGKDEQC 926
G +KALFATETFAMGLNMPAKTVVFT+VKKWDGDSH +IGSGEYIQ SGR GRRGKD++
Sbjct: 420 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRFIGSGEYIQMSGRAGRRGKDDRG 479
Query: 927 ICIIMINEQV 956
ICIIMI+EQ+
Sbjct: 480 ICIIMIDEQM 489
Score = 176 bits (447), Expect(2) = 1e-43
Identities = 89/109 (81%), Positives = 100/109 (91%)
Frame = +3
Query: 1245 G*PAPLVSTFRLSYYSILNLMSRAKGQFTAEHVIKNLFHQFQCEKALPDIGEKVAKLEQE 1424
G PAPLVSTFRLSYYSILNLMSRA+GQFTAEHVI N FHQFQ EKALPDIG+KV+KLE E
Sbjct: 500 GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVISNSFHQFQYEKALPDIGKKVSKLEHE 559
Query: 1425 ASVLDASGEDL*AEVAEYHKIRLDIAQLEKKMLSEITEPERIIFFLVPG 1571
A++LDASGE AEVAEYHK+RLDIAQLEKKM+SEIT PER+++FL+PG
Sbjct: 560 AAMLDASGE---AEVAEYHKLRLDIAQLEKKMMSEITRPERVLYFLLPG 605
Score = 28.5 bits (62), Expect(2) = 1e-43
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 1210 QMEMNTLKDMVLG 1248
QMEMNTL+DMVLG
Sbjct: 488 QMEMNTLRDMVLG 500
Score = 97.4 bits (241), Expect = 1e-17
Identities = 54/99 (54%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Frame = +1
Query: 1507 LRRRCCQR*PNPKELSFFLF---LVKIRXXXXXXXXXXXXXXMKKSPTALGNLPSALSS- 1674
L ++ P+ + +FL LVK+R +KK+P G LPSALSS
Sbjct: 584 LEKKMMSEITRPERVLYFLLPGRLVKVREGGTDWGWGVVVNVVKKAPAG-GTLPSALSSS 642
Query: 1675 RGSGYIVDTLLHCSPGSTENGSRTKPCPPRLGEKGEMHV 1791
RG GYIVDTLLHCSPGSTENGSR KPCPP GEKGEMHV
Sbjct: 643 RGGGYIVDTLLHCSPGSTENGSRPKPCPPHPGEKGEMHV 681
>emb|CBI24057.3| unnamed protein product [Vitis vinifera]
Length = 938
Score = 348 bits (894), Expect = 2e-93
Identities = 184/250 (73%), Positives = 202/250 (80%), Gaps = 1/250 (0%)
Frame = +3
Query: 210 VTWTDYNISCRPMF*LHYLRCCMG-GLYLVVDENELFREDNFVKLQDTFIKKKLENDXXX 386
V +TD+ RP HY+ G GLYLVVDENE FREDNFVKLQD+F K+K
Sbjct: 187 VVYTDF----RPTPLQHYVFPIGGSGLYLVVDENEQFREDNFVKLQDSFTKQKQGVGSKS 242
Query: 387 XXXXXXXXIAKSGTAQGGSYIYKIVKMIMECKFQPVISFSFRRRKCEQHAMSMSKLEFNT 566
IAK G A GGS I+KIVKMIME KFQPVI FSF RR+CEQHAMSMSKL+FNT
Sbjct: 243 VNSKTSGRIAKGGNASGGSDIFKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNT 302
Query: 567 DEEKEVVEQVFRNAILCLNEEDRNLPAIELMVPLLQLGIAVHHSGLLPTIKELVEFFFQE 746
EEK+VVEQVFRNA+LCLNEEDRNLPAIELM+PLLQ GIAVHHSGLLP IKELVE FQE
Sbjct: 303 KEEKDVVEQVFRNAVLCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQE 362
Query: 747 GPIKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHHYIGSGEYIQTSGRVGRRGKDEQC 926
G +KALFATETFAMGLNMPAKTVVFT+VKKWDGDSH +IGSGEYIQ SGR GRRGKD++
Sbjct: 363 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRFIGSGEYIQMSGRAGRRGKDDRG 422
Query: 927 ICIIMINEQV 956
ICIIMI+EQ+
Sbjct: 423 ICIIMIDEQM 432
Score = 176 bits (447), Expect(2) = 1e-43
Identities = 89/109 (81%), Positives = 100/109 (91%)
Frame = +3
Query: 1245 G*PAPLVSTFRLSYYSILNLMSRAKGQFTAEHVIKNLFHQFQCEKALPDIGEKVAKLEQE 1424
G PAPLVSTFRLSYYSILNLMSRA+GQFTAEHVI N FHQFQ EKALPDIG+KV+KLE E
Sbjct: 443 GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVISNSFHQFQYEKALPDIGKKVSKLEHE 502
Query: 1425 ASVLDASGEDL*AEVAEYHKIRLDIAQLEKKMLSEITEPERIIFFLVPG 1571
A++LDASGE AEVAEYHK+RLDIAQLEKKM+SEIT PER+++FL+PG
Sbjct: 503 AAMLDASGE---AEVAEYHKLRLDIAQLEKKMMSEITRPERVLYFLLPG 548
Score = 28.5 bits (62), Expect(2) = 1e-43
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 1210 QMEMNTLKDMVLG 1248
QMEMNTL+DMVLG
Sbjct: 431 QMEMNTLRDMVLG 443
Score = 97.4 bits (241), Expect = 1e-17
Identities = 54/99 (54%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Frame = +1
Query: 1507 LRRRCCQR*PNPKELSFFLF---LVKIRXXXXXXXXXXXXXXMKKSPTALGNLPSALSS- 1674
L ++ P+ + +FL LVK+R +KK+P G LPSALSS
Sbjct: 527 LEKKMMSEITRPERVLYFLLPGRLVKVREGGTDWGWGVVVNVVKKAPAG-GTLPSALSSS 585
Query: 1675 RGSGYIVDTLLHCSPGSTENGSRTKPCPPRLGEKGEMHV 1791
RG GYIVDTLLHCSPGSTENGSR KPCPP GEKGEMHV
Sbjct: 586 RGGGYIVDTLLHCSPGSTENGSRPKPCPPHPGEKGEMHV 624
>ref|XP_004170589.1| PREDICTED: superkiller viralicidic activity 2-like 2-like, partial
[Cucumis sativus]
Length = 865
Score = 343 bits (881), Expect = 7e-92
Identities = 181/250 (72%), Positives = 199/250 (79%), Gaps = 1/250 (0%)
Frame = +3
Query: 210 VTWTDYNISCRPMF*LHYLRCCMG-GLYLVVDENELFREDNFVKLQDTFIKKKLENDXXX 386
V +TD+ RP HY+ G GLYLVVDENE FREDNF+KLQDTF K+K
Sbjct: 267 VVYTDF----RPTPLQHYVFPAGGNGLYLVVDENEQFREDNFLKLQDTFAKQKQIVGHRT 322
Query: 387 XXXXXXXXIAKSGTAQGGSYIYKIVKMIMECKFQPVISFSFRRRKCEQHAMSMSKLEFNT 566
IAK G+A GGS IYKIVKMIME FQPVI FSF RR+CEQHAMSMSKL+FNT
Sbjct: 323 ANGKSSGRIAKGGSASGGSDIYKIVKMIMERNFQPVIVFSFSRRECEQHAMSMSKLDFNT 382
Query: 567 DEEKEVVEQVFRNAILCLNEEDRNLPAIELMVPLLQLGIAVHHSGLLPTIKELVEFFFQE 746
EEK++VE +FRNAILCLNEEDR LPAIELM+PLLQ GIAVHHSGLLP IKELVE FQE
Sbjct: 383 QEEKDMVEHIFRNAILCLNEEDRELPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQE 442
Query: 747 GPIKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHHYIGSGEYIQTSGRVGRRGKDEQC 926
G +KALFATETFAMGLNMPAKTVVFT+ KKWDGDSH +IGSGEYIQ SGR GRRGKDE+
Sbjct: 443 GLVKALFATETFAMGLNMPAKTVVFTAFKKWDGDSHRFIGSGEYIQMSGRAGRRGKDERG 502
Query: 927 ICIIMINEQV 956
ICIIMI+EQ+
Sbjct: 503 ICIIMIDEQM 512
Score = 173 bits (438), Expect(2) = 6e-42
Identities = 86/109 (78%), Positives = 101/109 (92%)
Frame = +3
Query: 1245 G*PAPLVSTFRLSYYSILNLMSRAKGQFTAEHVIKNLFHQFQCEKALPDIGEKVAKLEQE 1424
G PAPLVSTFRLSYYSILNLMSRA+GQFTAEHVI++ FHQFQ EKALPDIG++V+KLE+E
Sbjct: 523 GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKALPDIGKRVSKLEEE 582
Query: 1425 ASVLDASGEDL*AEVAEYHKIRLDIAQLEKKMLSEITEPERIIFFLVPG 1571
A+ LDASGE AEVAEYHK++LDIAQLEKKM+SEIT PER+++FL+PG
Sbjct: 583 AATLDASGE---AEVAEYHKLKLDIAQLEKKMMSEITRPERVLYFLLPG 628
Score = 26.2 bits (56), Expect(2) = 6e-42
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 1210 QMEMNTLKDMVLG 1248
QMEM T+KDM+LG
Sbjct: 511 QMEMGTIKDMILG 523
Score = 76.3 bits (186), Expect = 3e-11
Identities = 44/98 (44%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = +1
Query: 1507 LRRRCCQR*PNPKELSFFLF---LVKIRXXXXXXXXXXXXXXMKKSPTALGNLPSALSSR 1677
L ++ P+ + +FL LVK+R +KK LG LPS R
Sbjct: 607 LEKKMMSEITRPERVLYFLLPGRLVKVREGGTDWGWGVVVNVVKKPSAGLGILPS----R 662
Query: 1678 GSGYIVDTLLHCSPGSTENGSRTKPCPPRLGEKGEMHV 1791
G YIVDTLL CSP +EN SR KPCPP GEKGEMHV
Sbjct: 663 GGAYIVDTLLQCSPCLSENSSRPKPCPPHPGEKGEMHV 700