BLASTX nr result
ID: Coptis25_contig00002210
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002210 (3374 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity ... 1627 0.0 ref|XP_004152892.1| PREDICTED: superkiller viralicidic activity ... 1579 0.0 ref|XP_002308126.1| predicted protein [Populus trichocarpa] gi|2... 1573 0.0 ref|XP_003530466.1| PREDICTED: superkiller viralicidic activity ... 1543 0.0 ref|XP_003630609.1| ATP-dependent RNA helicase DOB1 [Medicago tr... 1538 0.0 >ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity 2-like 2-like [Vitis vinifera] Length = 995 Score = 1627 bits (4212), Expect = 0.0 Identities = 843/1030 (81%), Positives = 890/1030 (86%), Gaps = 1/1030 (0%) Frame = +2 Query: 86 EKTTLGKRKELXXXXXXXXXXXXXXXXXXXXSKKPNLTRTCVHEVAVPNGYSPTKDESIY 265 E TLGKRK SK+ NLTRTCVHE AVP GY+ KDES++ Sbjct: 3 ESPTLGKRK----LPEENSEVKQTPKQEESASKRRNLTRTCVHEAAVPVGYTSNKDESVH 58 Query: 266 GTLSSPLFNGTMAKTYAFKLDPFQEVSIACLERNESVLVSAHTSAGKTAVAEYAIAMGFR 445 GTLS+P++NG MAKTY F LDPFQ+VS+ACLERNESVLVSAHTSAGKTAVAEY+IAM FR Sbjct: 59 GTLSNPVYNGKMAKTYPFTLDPFQQVSVACLERNESVLVSAHTSAGKTAVAEYSIAMAFR 118 Query: 446 DKQRVLYTSPLKALSNQKYRELSQEFSDVGLMTGDVTISPNANVLVMTTEILRGMLYRGS 625 DKQRV+YTSPLKALSNQKYRELSQEFSDVGLMTGDVT+SPNA+ LVMTTEILRGMLYRGS Sbjct: 119 DKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS 178 Query: 626 EVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNLH 805 EVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP AIKMVFLSATMSNATEFAEWICNLH Sbjct: 179 EVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPTAIKMVFLSATMSNATEFAEWICNLH 238 Query: 806 KQPCHVVYTDFRPTPLQHYVFPVGGAGLYLVVDENELFREDNFVKLQDTFIKKKLENDXX 985 KQPCHVVYTDFRPTPLQHYVFP+GG+GLYLVVDENE FREDNFVKLQD+F K+K Sbjct: 239 KQPCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDENEQFREDNFVKLQDSFTKQKQGVGSK 298 Query: 986 XXXXXXXXXIAKSGTAQGGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFN 1165 IAK G A GGSDI+KIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFN Sbjct: 299 SVNSKTSGRIAKGGNASGGSDIFKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFN 358 Query: 1166 TDEEKEVVEQVFRNAILCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQ 1345 T EEK+VVEQVFRNA+LCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQ Sbjct: 359 TKEEKDVVEQVFRNAVLCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQ 418 Query: 1346 EGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDER 1525 EGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGDSHR+IGSGEYIQMSGRAGRRGKD+R Sbjct: 419 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRFIGSGEYIQMSGRAGRRGKDDR 478 Query: 1526 GICIIMIDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 1705 GICIIMIDEQMEMNTL+DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI NSFH Sbjct: 479 GICIIMIDEQMEMNTLRDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVISNSFH 538 Query: 1706 QFQYEKALPDIGEKVAKLEQEASVLDASGEAEVAEYHKIRLDIAQLEKKMMSEITRPERI 1885 QFQYEKALPDIG+KV+KLE EA++LDASGEAEVAEYHK+RLDIAQLEKKMMSEITRPER+ Sbjct: 539 QFQYEKALPDIGKKVSKLEHEAAMLDASGEAEVAEYHKLRLDIAQLEKKMMSEITRPERV 598 Query: 1886 LYFLVPGRLVKIRXXXXXXXXXXXXXXMKKSPIALGNLPSAL-SSRGSGYIVDTLLHCSA 2062 LYFL+PGRLVK+R +KK+P A G LPSAL SSRG GYIVDTLLHCS Sbjct: 599 LYFLLPGRLVKVREGGTDWGWGVVVNVVKKAP-AGGTLPSALSSSRGGGYIVDTLLHCSP 657 Query: 2063 GSTENGSRTKPCPPRLGEKGEMHVVS*RSCEATIXXXXXXXXXXXXXXXXXXXXXXXXXX 2242 GSTENGSR KPCPP GEKGEMHVV Sbjct: 658 GSTENGSRPKPCPPHPGEKGEMHVV--------------------------------PVQ 685 Query: 2243 XXLICALSKYRVSIPSDLRPVEARQSILLAVQELVSGFPNGFPKLNPVKDMGIEDPELVE 2422 LI ALSK R+SIP DLRP+EARQSILLAVQEL + FP G PKLNPVKDMGIEDPE VE Sbjct: 686 LSLISALSKLRISIPPDLRPLEARQSILLAVQELGTRFPQGLPKLNPVKDMGIEDPEFVE 745 Query: 2423 LVNQIEELEKKLFAHPLHKSSQDTQQIKCFQRKAEVNHEIQLLKSKMRDSQLQKFRDELK 2602 L NQIEELE+KLFAHPLHK SQD QI+ FQRKAEVNHEIQ LK+KMRDSQLQKFRDELK Sbjct: 746 LANQIEELEQKLFAHPLHK-SQDENQIRSFQRKAEVNHEIQQLKTKMRDSQLQKFRDELK 804 Query: 2603 NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDPHQVVALASCF 2782 NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD HQV ALASCF Sbjct: 805 NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 864 Query: 2783 IPGDRSNEQIHLRTELAKPLQQLQDSARRIAEIQRECKLEVNVDEYVESTVRPYLMDVIY 2962 IPGD+S EQIHLRTELAKPLQQLQDSARRIAEIQ ECKLEVNVDEYVEST RPYLMDVIY Sbjct: 865 IPGDKSTEQIHLRTELAKPLQQLQDSARRIAEIQHECKLEVNVDEYVESTARPYLMDVIY 924 Query: 2963 CWSKGATFAEIIEMTDIFEGSIIRLARRLDEFLNQLRSAAHAVGELDLESKFAAGSESLR 3142 CWSKGATFAE+I+MTDIFEGSIIR ARRLDEFLNQLR+AA+AVGE +LE+KFAA SESLR Sbjct: 925 CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEANLENKFAAASESLR 984 Query: 3143 RGIMFANSLY 3172 RGIMFANSLY Sbjct: 985 RGIMFANSLY 994 >ref|XP_004152892.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Cucumis sativus] Length = 1014 Score = 1579 bits (4089), Expect = 0.0 Identities = 800/998 (80%), Positives = 873/998 (87%) Frame = +2 Query: 179 SKKPNLTRTCVHEVAVPNGYSPTKDESIYGTLSSPLFNGTMAKTYAFKLDPFQEVSIACL 358 S + +LTRTCVHEVAVP GYS TKDES++GTL +P++NGTMAKTY F LDPFQ+VS++CL Sbjct: 53 SNRRSLTRTCVHEVAVPVGYSSTKDESVHGTLPNPVYNGTMAKTYPFTLDPFQQVSVSCL 112 Query: 359 ERNESVLVSAHTSAGKTAVAEYAIAMGFRDKQRVLYTSPLKALSNQKYRELSQEFSDVGL 538 ERNES+LVSAHTSAGKTAVAEYAIAM FRDKQRV+YTSPLKALSNQKYRELSQEF DVGL Sbjct: 113 ERNESILVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELSQEFKDVGL 172 Query: 539 MTGDVTISPNANVLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 718 MTGDVT+SPNA+ LVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYM+DRERGVVWEESII Sbjct: 173 MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMRDRERGVVWEESII 232 Query: 719 FLPPAIKMVFLSATMSNATEFAEWICNLHKQPCHVVYTDFRPTPLQHYVFPVGGAGLYLV 898 FLPPAIKMVFLSATMSNATEFAEWIC +HKQPCHVVYTDFRPTPLQHYVFP GG GLYLV Sbjct: 233 FLPPAIKMVFLSATMSNATEFAEWICYIHKQPCHVVYTDFRPTPLQHYVFPAGGNGLYLV 292 Query: 899 VDENELFREDNFVKLQDTFIKKKLENDXXXXXXXXXXXIAKSGTAQGGSDIYKIVKMIME 1078 VDENE FREDNF+KLQDTF K+K IAK G+A GGSDIYKIVKMIME Sbjct: 293 VDENEQFREDNFLKLQDTFAKQKQIVGHRTANGKSSGRIAKGGSASGGSDIYKIVKMIME 352 Query: 1079 RKFQPVIIFSFSRRECEQHAMSMSKLDFNTDEEKEVVEQVFRNAILCLNEEDRNLPAIEL 1258 R FQPVI+FSFSRRECEQHAMSMSKLDFNT EEK++VE +FRNAILCLNEEDR LPAIEL Sbjct: 353 RNFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDMVEHIFRNAILCLNEEDRELPAIEL 412 Query: 1259 MLPLLQRGIAVHHSGLLPIIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKK 1438 MLPLLQRGIAVHHSGLLP+IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT+ KK Sbjct: 413 MLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAFKK 472 Query: 1439 WDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMNTLKDMVLGKPAPLVSTF 1618 WDGDSHR+IGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEM T+KDM+LGKPAPLVSTF Sbjct: 473 WDGDSHRFIGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMGTIKDMILGKPAPLVSTF 532 Query: 1619 RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGEKVAKLEQEASVLDASGEA 1798 RLSYYSILNLMSRAEGQFTAEHVI++SFHQFQ+EKALPDIG++V+KLE+EA+ LDASGEA Sbjct: 533 RLSYYSILNLMSRAEGQFTAEHVIRHSFHQFQHEKALPDIGKRVSKLEEEAATLDASGEA 592 Query: 1799 EVAEYHKIRLDIAQLEKKMMSEITRPERILYFLVPGRLVKIRXXXXXXXXXXXXXXMKKS 1978 EVAEYHK++LDIAQLEKKMMSEITRPER+LYFL+PGRLVK+R +KK Sbjct: 593 EVAEYHKLKLDIAQLEKKMMSEITRPERVLYFLLPGRLVKVREGGTDWGWGVVVNVVKKP 652 Query: 1979 PIALGNLPSALSSRGSGYIVDTLLHCSAGSTENGSRTKPCPPRLGEKGEMHVVS*RSCEA 2158 LG LP SRG YIVDTLL CS +EN SR KPCPP GEKGEMHVV Sbjct: 653 SAGLGILP----SRGGAYIVDTLLQCSPCLSENSSRPKPCPPHPGEKGEMHVV------- 701 Query: 2159 TIXXXXXXXXXXXXXXXXXXXXXXXXXXXXLICALSKYRVSIPSDLRPVEARQSILLAVQ 2338 LI ALSK R+SIPSDLRPVEAR+SILLA++ Sbjct: 702 -------------------------PVQLPLISALSKLRISIPSDLRPVEARESILLALE 736 Query: 2339 ELVSGFPNGFPKLNPVKDMGIEDPELVELVNQIEELEKKLFAHPLHKSSQDTQQIKCFQR 2518 EL + FP GFPKLNPVKDM IEDPE+VELV QIEELE+KL+AHPLHK S++ Q+KCFQR Sbjct: 737 ELGTRFPQGFPKLNPVKDMNIEDPEIVELVKQIEELERKLYAHPLHK-SREVDQMKCFQR 795 Query: 2519 KAEVNHEIQLLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 2698 KAEVNHEIQ+LK+KMRDSQLQKFRDELKNRSRVLKKLGH+DADGVVQLKGRAACLIDTGD Sbjct: 796 KAEVNHEIQILKNKMRDSQLQKFRDELKNRSRVLKKLGHVDADGVVQLKGRAACLIDTGD 855 Query: 2699 ELLVTELMFNGTFNDLDPHQVVALASCFIPGDRSNEQIHLRTELAKPLQQLQDSARRIAE 2878 ELLVTELMFNGTFNDLD HQ+ ALASCFIPGD+SNEQI LRTELA+PLQQLQDSARRIAE Sbjct: 856 ELLVTELMFNGTFNDLDHHQIAALASCFIPGDKSNEQIQLRTELARPLQQLQDSARRIAE 915 Query: 2879 IQRECKLEVNVDEYVESTVRPYLMDVIYCWSKGATFAEIIEMTDIFEGSIIRLARRLDEF 3058 IQ ECKL++NV+EYVESTVRP+LMDVIYCWSKGA+F+E+I+MTDIFEGSIIR ARRLDEF Sbjct: 916 IQHECKLDINVEEYVESTVRPHLMDVIYCWSKGASFSEVIQMTDIFEGSIIRSARRLDEF 975 Query: 3059 LNQLRSAAHAVGELDLESKFAAGSESLRRGIMFANSLY 3172 LNQLR+AA+AVGE++LESKF+A SESLRRGIMFANSLY Sbjct: 976 LNQLRAAANAVGEVNLESKFSAASESLRRGIMFANSLY 1013 >ref|XP_002308126.1| predicted protein [Populus trichocarpa] gi|222854102|gb|EEE91649.1| predicted protein [Populus trichocarpa] Length = 985 Score = 1573 bits (4073), Expect = 0.0 Identities = 800/997 (80%), Positives = 871/997 (87%) Frame = +2 Query: 182 KKPNLTRTCVHEVAVPNGYSPTKDESIYGTLSSPLFNGTMAKTYAFKLDPFQEVSIACLE 361 KK LTRTCVHEVAVP+GY KDE+ +GTLS+PL+NG MAK+YAF+LDPFQ+VS+ACLE Sbjct: 25 KKRILTRTCVHEVAVPHGYESNKDETFHGTLSNPLYNGEMAKSYAFELDPFQKVSVACLE 84 Query: 362 RNESVLVSAHTSAGKTAVAEYAIAMGFRDKQRVLYTSPLKALSNQKYRELSQEFSDVGLM 541 RNESVLVSAHTSAGKTAVAEYAIAM FR+KQRV+YTSPLKALSNQKYREL QEF DVGLM Sbjct: 85 RNESVLVSAHTSAGKTAVAEYAIAMAFREKQRVIYTSPLKALSNQKYRELQQEFQDVGLM 144 Query: 542 TGDVTISPNANVLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIF 721 TGDVT+SPNA+ LVMTTEILRGMLYRGSE+LKEVAW+IFDEIHYMKDRERGVVWEESIIF Sbjct: 145 TGDVTLSPNASCLVMTTEILRGMLYRGSEILKEVAWIIFDEIHYMKDRERGVVWEESIIF 204 Query: 722 LPPAIKMVFLSATMSNATEFAEWICNLHKQPCHVVYTDFRPTPLQHYVFPVGGAGLYLVV 901 +P IKMVFLSATMSNATEFAEWIC+LHKQPCHVVYTDFRPTPLQHYVFPVGGAGLYLVV Sbjct: 205 MPQVIKMVFLSATMSNATEFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGAGLYLVV 264 Query: 902 DENELFREDNFVKLQDTFIKKKLENDXXXXXXXXXXXIAKSGTAQGGSDIYKIVKMIMER 1081 DE+E FREDNF+KLQDTF K+K I+K G A GGSDIYKIVKMIMER Sbjct: 265 DESEQFREDNFMKLQDTFSKQKAGEGNKSANAKASGRISKGGNASGGSDIYKIVKMIMER 324 Query: 1082 KFQPVIIFSFSRRECEQHAMSMSKLDFNTDEEKEVVEQVFRNAILCLNEEDRNLPAIELM 1261 KFQPVI+FSFSRRE EQHAMSMSKLDFNT EEK++VEQVF NAILCLNEEDRNLPAIELM Sbjct: 325 KFQPVIVFSFSRREVEQHAMSMSKLDFNTQEEKDIVEQVFNNAILCLNEEDRNLPAIELM 384 Query: 1262 LPLLQRGIAVHHSGLLPIIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKW 1441 LPLL+RGIAVHHSGLLP+IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKW Sbjct: 385 LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 444 Query: 1442 DGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMNTLKDMVLGKPAPLVSTFR 1621 DGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDE+MEMNTLKDMVLGKPAPLVSTFR Sbjct: 445 DGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDERMEMNTLKDMVLGKPAPLVSTFR 504 Query: 1622 LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGEKVAKLEQEASVLDASGEAE 1801 LSYYSILNLMSRAEGQFTAEHVI+NSFHQFQYEKALPDIGEKV+KLE+EA+VLDASGEAE Sbjct: 505 LSYYSILNLMSRAEGQFTAEHVIRNSFHQFQYEKALPDIGEKVSKLEEEAAVLDASGEAE 564 Query: 1802 VAEYHKIRLDIAQLEKKMMSEITRPERILYFLVPGRLVKIRXXXXXXXXXXXXXXMKKSP 1981 VA YH ++L++AQLEKKMM EITRPERILY+L GRL+K+R +KK Sbjct: 565 VAGYHNLKLEMAQLEKKMMKEITRPERILYYLCTGRLIKVREGGTDWGWGVVVNVVKKPT 624 Query: 1982 IALGNLPSALSSRGSGYIVDTLLHCSAGSTENGSRTKPCPPRLGEKGEMHVVS*RSCEAT 2161 LG LP S+G+GYIVDTLLHCS G +E+GSR +PCPPR GEKGEMHVV Sbjct: 625 AGLGTLP----SKGAGYIVDTLLHCSPGPSESGSRPRPCPPRPGEKGEMHVV-------- 672 Query: 2162 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXLICALSKYRVSIPSDLRPVEARQSILLAVQE 2341 LICALSK R+SIP+DLRP+EARQSILLAVQE Sbjct: 673 ------------------------PVQLPLICALSKVRISIPADLRPLEARQSILLAVQE 708 Query: 2342 LVSGFPNGFPKLNPVKDMGIEDPELVELVNQIEELEKKLFAHPLHKSSQDTQQIKCFQRK 2521 L + FP G PKLNPVKDM IEDPE+VELVNQIEELE+KL AHPL+K SQD Q+K F RK Sbjct: 709 LGNRFPEGLPKLNPVKDMKIEDPEIVELVNQIEELEQKLHAHPLNK-SQDINQMKSFHRK 767 Query: 2522 AEVNHEIQLLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDE 2701 AEVNHEIQ LKSKMRDSQLQKFR+ELKNRSRVLK+LGHIDADGVVQ+KGRAACLIDTGDE Sbjct: 768 AEVNHEIQQLKSKMRDSQLQKFREELKNRSRVLKRLGHIDADGVVQVKGRAACLIDTGDE 827 Query: 2702 LLVTELMFNGTFNDLDPHQVVALASCFIPGDRSNEQIHLRTELAKPLQQLQDSARRIAEI 2881 LLVTELMFNGTFNDLD HQV ALASCFIP D+S+EQIHLRTELAKPLQQLQ+SAR+IAEI Sbjct: 828 LLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIHLRTELAKPLQQLQESARKIAEI 887 Query: 2882 QRECKLEVNVDEYVESTVRPYLMDVIYCWSKGATFAEIIEMTDIFEGSIIRLARRLDEFL 3061 Q ECKL++NVDEYVESTVRP+L+DV+YCWSKGA+F+E+I+MTDIFEGSIIR ARRLDEFL Sbjct: 888 QYECKLDINVDEYVESTVRPFLVDVVYCWSKGASFSEVIQMTDIFEGSIIRSARRLDEFL 947 Query: 3062 NQLRSAAHAVGELDLESKFAAGSESLRRGIMFANSLY 3172 NQLR+AA AVGE+ LESKFAA SESLRRGIMFANSLY Sbjct: 948 NQLRAAAQAVGEVSLESKFAAASESLRRGIMFANSLY 984 >ref|XP_003530466.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Glycine max] Length = 976 Score = 1543 bits (3995), Expect = 0.0 Identities = 798/1031 (77%), Positives = 863/1031 (83%) Frame = +2 Query: 80 ESEKTTLGKRKELXXXXXXXXXXXXXXXXXXXXSKKPNLTRTCVHEVAVPNGYSPTKDES 259 E E TLGKR+E K + RTCVHEVAVP+ Y +KDE Sbjct: 2 EIESPTLGKRRE---------PELPVTETTSMPKKARSSERTCVHEVAVPSSYVSSKDEE 52 Query: 260 IYGTLSSPLFNGTMAKTYAFKLDPFQEVSIACLERNESVLVSAHTSAGKTAVAEYAIAMG 439 ++GTLS+PL NG MAK+Y F LDPFQ+VSIACLERNESVLVSAHTSAGKTAVAEYAIAM Sbjct: 53 LHGTLSNPLHNGPMAKSYPFTLDPFQQVSIACLERNESVLVSAHTSAGKTAVAEYAIAMS 112 Query: 440 FRDKQRVLYTSPLKALSNQKYRELSQEFSDVGLMTGDVTISPNANVLVMTTEILRGMLYR 619 FRDKQRV+YTSPLKALSNQKYRELSQEF+DVGLMTGDVT+SPNA LVMTTEILRGMLYR Sbjct: 113 FRDKQRVIYTSPLKALSNQKYRELSQEFTDVGLMTGDVTLSPNATCLVMTTEILRGMLYR 172 Query: 620 GSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICN 799 GSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICN Sbjct: 173 GSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICN 232 Query: 800 LHKQPCHVVYTDFRPTPLQHYVFPVGGAGLYLVVDENELFREDNFVKLQDTFIKKKLEND 979 +HKQPCHVVYTDFRPTPLQHYVFP+GG+GLYLVVDENE FREDNF+KLQDTF K+ L + Sbjct: 233 IHKQPCHVVYTDFRPTPLQHYVFPMGGSGLYLVVDENEQFREDNFLKLQDTFTKQNLGDG 292 Query: 980 XXXXXXXXXXXIAKSGTAQGGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLD 1159 K G A GGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLD Sbjct: 293 KRGGKGAGRG--GKGGNASGGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLD 350 Query: 1160 FNTDEEKEVVEQVFRNAILCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELL 1339 FN+ EEK+ VE VF+NA+LCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLP+IKELVELL Sbjct: 351 FNSQEEKDTVEHVFQNAVLCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPVIKELVELL 410 Query: 1340 FQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 1519 FQEGLVKALFATETFAMGLNMPAKTV+FT+VKKWDGDSHRYIGSGEYIQMSGRAGRRGKD Sbjct: 411 FQEGLVKALFATETFAMGLNMPAKTVIFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 470 Query: 1520 ERGICIIMIDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 1699 ERGICIIMIDEQMEMN LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI+NS Sbjct: 471 ERGICIIMIDEQMEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRNS 530 Query: 1700 FHQFQYEKALPDIGEKVAKLEQEASVLDASGEAEVAEYHKIRLDIAQLEKKMMSEITRPE 1879 FHQFQYEKALPD+ ++V+KLEQE ++LDASGEA+V+EYHK++L+IAQLEKK+MS+I RPE Sbjct: 531 FHQFQYEKALPDMEKRVSKLEQEVALLDASGEAQVSEYHKLKLEIAQLEKKIMSKIIRPE 590 Query: 1880 RILYFLVPGRLVKIRXXXXXXXXXXXXXXMKKSPIALGNLPSALSSRGSGYIVDTLLHCS 2059 ILYFLVPGRL+K+R +KK PS G GYIVDTLLHCS Sbjct: 591 IILYFLVPGRLIKVREGGTDWGWGVVVNVVKK--------PS-----GGGYIVDTLLHCS 637 Query: 2060 AGSTENGSRTKPCPPRLGEKGEMHVVS*RSCEATIXXXXXXXXXXXXXXXXXXXXXXXXX 2239 S EN SR KPCPPR GEKGEMHVV Sbjct: 638 PVSNENSSRPKPCPPRPGEKGEMHVV--------------------------------PV 665 Query: 2240 XXXLICALSKYRVSIPSDLRPVEARQSILLAVQELVSGFPNGFPKLNPVKDMGIEDPELV 2419 LI AL + RVSIP DLRP+EARQSILLAVQEL + FP G PKLNPVKDM + D E+V Sbjct: 666 QLPLISALGQLRVSIPPDLRPLEARQSILLAVQELGNRFPQGLPKLNPVKDMDVRDSEIV 725 Query: 2420 ELVNQIEELEKKLFAHPLHKSSQDTQQIKCFQRKAEVNHEIQLLKSKMRDSQLQKFRDEL 2599 ELVNQ+EELEKKLF HP+HK QD QIKCF+RKAEVNHE+Q LK+KMRDSQLQKFR+EL Sbjct: 726 ELVNQVEELEKKLFTHPMHK-HQDMDQIKCFERKAEVNHEVQQLKTKMRDSQLQKFREEL 784 Query: 2600 KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDPHQVVALASC 2779 KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD HQV ALASC Sbjct: 785 KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 844 Query: 2780 FIPGDRSNEQIHLRTELAKPLQQLQDSARRIAEIQRECKLEVNVDEYVESTVRPYLMDVI 2959 FIPGD+S EQI LRTELA+PLQQLQDSARRIAEIQ ECKL++NV+EYV+STVRP+LMDVI Sbjct: 845 FIPGDKSTEQIQLRTELARPLQQLQDSARRIAEIQHECKLDINVNEYVDSTVRPFLMDVI 904 Query: 2960 YCWSKGATFAEIIEMTDIFEGSIIRLARRLDEFLNQLRSAAHAVGELDLESKFAAGSESL 3139 Y WSKGA FA++I+MTDIFEGSIIR ARRLDEFLNQLR+AA+AVGE DLE KFAA SESL Sbjct: 905 YSWSKGANFADVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEADLEKKFAAASESL 964 Query: 3140 RRGIMFANSLY 3172 RRGIMFANSLY Sbjct: 965 RRGIMFANSLY 975 >ref|XP_003630609.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula] gi|355524631|gb|AET05085.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula] Length = 984 Score = 1538 bits (3981), Expect = 0.0 Identities = 795/1035 (76%), Positives = 864/1035 (83%), Gaps = 4/1035 (0%) Frame = +2 Query: 80 ESEKTTLGKRKELXXXXXXXXXXXXXXXXXXXXSKKPNLTR----TCVHEVAVPNGYSPT 247 E E TTLGKR E S +P R TCVHEVAVP Y+ T Sbjct: 8 EQESTTLGKRSE---------PEPVSTADGGDTSSQPKKCRSSECTCVHEVAVPINYTST 58 Query: 248 KDESIYGTLSSPLFNGTMAKTYAFKLDPFQEVSIACLERNESVLVSAHTSAGKTAVAEYA 427 KDES++GTLS+PL NGTMAKTY F LDPFQ+VSIACLERNESVLVSAHTSAGKTA+AEYA Sbjct: 59 KDESLHGTLSNPLHNGTMAKTYPFTLDPFQQVSIACLERNESVLVSAHTSAGKTAIAEYA 118 Query: 428 IAMGFRDKQRVLYTSPLKALSNQKYRELSQEFSDVGLMTGDVTISPNANVLVMTTEILRG 607 IAM FRDKQRV+YTSPLKALSNQKYRELSQEF+DVGLMTGDVT+SPNA LVMTTEILRG Sbjct: 119 IAMSFRDKQRVIYTSPLKALSNQKYRELSQEFTDVGLMTGDVTLSPNATCLVMTTEILRG 178 Query: 608 MLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAE 787 MLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAE Sbjct: 179 MLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAE 238 Query: 788 WICNLHKQPCHVVYTDFRPTPLQHYVFPVGGAGLYLVVDENELFREDNFVKLQDTFIKKK 967 WICN+HKQPCHVVYTDFRPTPLQHYVFP+GG+GLYLVVDENE FREDNF+K++DTF+K+K Sbjct: 239 WICNIHKQPCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDENEQFREDNFLKVEDTFVKQK 298 Query: 968 LENDXXXXXXXXXXXIAKSGTAQGGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSM 1147 L K G+A GGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSM Sbjct: 299 LGEGKGGKTNGR---FGKGGSASGGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSM 355 Query: 1148 SKLDFNTDEEKEVVEQVFRNAILCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKEL 1327 SKLDFN+ EEK+ VE VF+NA+LCLNEEDR+LPAIELMLPLLQRGIAVHHSGLLP+IKEL Sbjct: 356 SKLDFNSQEEKDTVEHVFQNAMLCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKEL 415 Query: 1328 VELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHRYIGSGEYIQMSGRAGR 1507 VELLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGDSHRYIGSGEYIQMSGRAGR Sbjct: 416 VELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGR 475 Query: 1508 RGKDERGICIIMIDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV 1687 RGKDERGICIIMIDEQMEMN LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV Sbjct: 476 RGKDERGICIIMIDEQMEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV 535 Query: 1688 IKNSFHQFQYEKALPDIGEKVAKLEQEASVLDASGEAEVAEYHKIRLDIAQLEKKMMSEI 1867 I+NSFHQFQYEK LPD+G++V+ LEQE ++LDA+GEAEV+EYHK++LD+AQLEKKMMS+I Sbjct: 536 IRNSFHQFQYEKTLPDVGKRVSMLEQEVALLDAAGEAEVSEYHKLKLDLAQLEKKMMSQI 595 Query: 1868 TRPERILYFLVPGRLVKIRXXXXXXXXXXXXXXMKKSPIALGNLPSALSSRGSGYIVDTL 2047 RPE ILYFLVPGRL+K+R +KK P+ GYIVDTL Sbjct: 596 IRPEMILYFLVPGRLIKVREGGTDWGWGVVVNVVKK-PV-------------GGYIVDTL 641 Query: 2048 LHCSAGSTENGSRTKPCPPRLGEKGEMHVVS*RSCEATIXXXXXXXXXXXXXXXXXXXXX 2227 LHCS GS EN R KPCPPR GEKGEMHVV Sbjct: 642 LHCSPGSNENSIRPKPCPPRPGEKGEMHVV------------------------------ 671 Query: 2228 XXXXXXXLICALSKYRVSIPSDLRPVEARQSILLAVQELVSGFPNGFPKLNPVKDMGIED 2407 LI ALSK R+ +P DLRP+EARQSILLAVQEL + FP G PKLNPVKDM + D Sbjct: 672 --PVQLPLISALSKLRIYVPPDLRPLEARQSILLAVQELGNRFPQGLPKLNPVKDMDVRD 729 Query: 2408 PELVELVNQIEELEKKLFAHPLHKSSQDTQQIKCFQRKAEVNHEIQLLKSKMRDSQLQKF 2587 E+VELVNQIEELEKKLF HP+HK QD QIKCF+RKAEVNHEIQ LK+KMRDSQLQKF Sbjct: 730 SEIVELVNQIEELEKKLFDHPMHK-IQDVDQIKCFERKAEVNHEIQQLKAKMRDSQLQKF 788 Query: 2588 RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDPHQVVA 2767 R+ELKNRSRVLKKLGHID+D VVQLKGRAACLIDTGDELLVTELMFNGTFNDLD HQV A Sbjct: 789 REELKNRSRVLKKLGHIDSDSVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 848 Query: 2768 LASCFIPGDRSNEQIHLRTELAKPLQQLQDSARRIAEIQRECKLEVNVDEYVESTVRPYL 2947 LASCFIP ++S+EQI LR+ELA+PLQQLQDSARRIAEI+ ECKLEVNV+EYVESTVRP+L Sbjct: 849 LASCFIPIEKSSEQIQLRSELARPLQQLQDSARRIAEIEHECKLEVNVNEYVESTVRPFL 908 Query: 2948 MDVIYCWSKGATFAEIIEMTDIFEGSIIRLARRLDEFLNQLRSAAHAVGELDLESKFAAG 3127 MDVIY WSKG++FA++ +MTDIFEGSIIR ARRLDEFLNQLR+AA AVGE DLE KFAA Sbjct: 909 MDVIYSWSKGSSFADVTQMTDIFEGSIIRAARRLDEFLNQLRAAADAVGEADLEKKFAAA 968 Query: 3128 SESLRRGIMFANSLY 3172 SESLRRGI+FANSLY Sbjct: 969 SESLRRGIIFANSLY 983