BLASTX nr result
ID: Coptis25_contig00002205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002205
(866 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|2... 255 8e-66
ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndr... 254 1e-65
gb|AFK40115.1| unknown [Lotus japonicus] 252 7e-65
ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-... 248 1e-63
ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-... 246 5e-63
>ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|222839339|gb|EEE77676.1|
predicted protein [Populus trichocarpa]
Length = 323
Score = 255 bits (652), Expect = 8e-66
Identities = 122/215 (56%), Positives = 159/215 (73%)
Frame = +1
Query: 31 PYFLRPHRVSVNTTMKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFMIGF 210
P+ L P N M+YP KFGG+I+Y RT EVEKA EL++ ++ +++ +DR +IGF
Sbjct: 97 PFSLSP--CQGNVKMRYPAMKFGGQILYSRTSIEVEKAARELLQSLEAEKREMDRVIIGF 154
Query: 211 DIEWKPTFKRGAVPRKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVKVGVWIG 390
DIEWKP+F G +P K AVMQIC + S C+V HI HSGI +LQ LED K VKVG+ IG
Sbjct: 155 DIEWKPSFTTGVLPGKAAVMQICANTSLCHVMHIFHSGITPSLQFLLEDSKLVKVGIGIG 214
Query: 391 GDADKIYNDYNIRIQSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNKIRLGNW 570
GD K++ DYN ++S+E+LS LAN+KLDG + W L AL + L KEL+KPNKIRLGNW
Sbjct: 215 GDCAKVFRDYNASVKSVEDLSYLANQKLDGKPKTWGLQALAKILVCKELQKPNKIRLGNW 274
Query: 571 EVEVLSRDQLLYAATDAFASWQLYEILKTFPDLSE 675
+V+VLS++QL YAATDAFASWQLY++LK+ PD +
Sbjct: 275 QVDVLSKEQLQYAATDAFASWQLYQVLKSLPDAKD 309
>ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like
exonuclease-like [Vitis vinifera]
Length = 331
Score = 254 bits (650), Expect = 1e-65
Identities = 121/209 (57%), Positives = 157/209 (75%)
Frame = +1
Query: 64 NTTMKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFMIGFDIEWKPTFKRG 243
N M+ P FGG IVY RT +EVEKAT EL++ ++ K+K + + ++GFDIEW+PTF++G
Sbjct: 109 NFKMRLPKINFGGHIVYSRTVTEVEKATAELLKIVETKKKELGQAILGFDIEWRPTFRKG 168
Query: 244 AVPRKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVKVGVWIGGDADKIYNDYN 423
K AVMQICG S CYV HIIHSGIP NL S LEDP +KVGV I DA K++ D++
Sbjct: 169 VSQGKAAVMQICGGNSHCYVMHIIHSGIPRNLXSLLEDPTSIKVGVGIANDAVKVFKDHS 228
Query: 424 IRIQSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNKIRLGNWEVEVLSRDQLL 603
+ ++ +E+LS LAN+KL G ++W L +LTE L SK+L KPNKIRLGNWE +VLS+ QL
Sbjct: 229 VSVKDLEDLSYLANQKLGGDAKKWGLGSLTEMLISKQLLKPNKIRLGNWEADVLSKAQLE 288
Query: 604 YAATDAFASWQLYEILKTFPDLSEKQNEQ 690
YAATDAFASW LYE+LK+FPD +E + E+
Sbjct: 289 YAATDAFASWYLYEVLKSFPDTAENKIEE 317
>gb|AFK40115.1| unknown [Lotus japonicus]
Length = 209
Score = 252 bits (644), Expect = 7e-65
Identities = 117/202 (57%), Positives = 152/202 (75%)
Frame = +1
Query: 73 MKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFMIGFDIEWKPTFKRGAVP 252
M+ P KF G+I Y R++ +V+KA +L+E +++K++ + R IGFDIEW+P+F RG P
Sbjct: 1 MRLPVMKFSGQITYSRSFDDVQKAVTKLLEFVEEKKRAMMRIAIGFDIEWRPSFVRGVPP 60
Query: 253 RKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVKVGVWIGGDADKIYNDYNIRI 432
K AVMQICGD S C+V H+IHSGIP NLQ LEDP ++KVG IG DA K++ DYN+ +
Sbjct: 61 GKVAVMQICGDTSHCHVLHLIHSGIPQNLQLLLEDPTFLKVGAGIGSDASKVFRDYNVSV 120
Query: 433 QSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNKIRLGNWEVEVLSRDQLLYAA 612
+ +E+LS AN+KL G +W LAALTET+ SK+L+KPNKIRLGNWE VLS++QL YAA
Sbjct: 121 KGVEDLSFHANEKLGGGINKWGLAALTETVLSKQLKKPNKIRLGNWETPVLSKEQLQYAA 180
Query: 613 TDAFASWQLYEILKTFPDLSEK 678
TDAFASW LYE +K PD S K
Sbjct: 181 TDAFASWYLYEAIKNLPDSSGK 202
>ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 314
Score = 248 bits (634), Expect = 1e-63
Identities = 122/228 (53%), Positives = 163/228 (71%)
Frame = +1
Query: 13 THGPPTPYFLRPHRVSVNTTMKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVD 192
+H P L P RV N+ M++P +GGRI+Y RT SEV++A+ EL + I +K +D
Sbjct: 88 SHQSPRFSPLSPCRV--NSKMRFPALNYGGRIIYSRTVSEVDRASRELAKKINSTRKAMD 145
Query: 193 RFMIGFDIEWKPTFKRGAVPRKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVK 372
+ IGFDIEW+P+FKRG P K AVMQ+C + S C+V HIIHSGIP +LQ+ LED K
Sbjct: 146 QITIGFDIEWRPSFKRGVPPGKAAVMQLCLENSECHVMHIIHSGIPQSLQALLEDDTLSK 205
Query: 373 VGVWIGGDADKIYNDYNIRIQSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNK 552
GV I DA K++ +YN+ ++ + E+S LAN+KL G ++W L ALTETL SKEL+KP++
Sbjct: 206 AGVGIASDASKVFKEYNVSVKPLNEISDLANQKLAGVPKKWGLRALTETLISKELQKPDR 265
Query: 553 IRLGNWEVEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQEV 696
IRLGNWEV VLS+DQL YAATDAFASW L+EILK FP + + + + +
Sbjct: 266 IRLGNWEVAVLSKDQLQYAATDAFASWYLHEILKGFPHVEKVADSEPI 313
>ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 314
Score = 246 bits (628), Expect = 5e-63
Identities = 121/228 (53%), Positives = 162/228 (71%)
Frame = +1
Query: 13 THGPPTPYFLRPHRVSVNTTMKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVD 192
+H P L P RV N+ M++P +GGRI+Y RT SEV++A+ EL + I +K +D
Sbjct: 88 SHQSPRFSPLSPCRV--NSKMRFPALNYGGRIIYSRTVSEVDRASRELAKKINSTRKAMD 145
Query: 193 RFMIGFDIEWKPTFKRGAVPRKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVK 372
+ IGFDIEW+P+FKRG P K AVMQ+C + S C+V HIIHSGIP +LQ+ LED K
Sbjct: 146 QITIGFDIEWRPSFKRGVPPGKAAVMQLCLENSECHVMHIIHSGIPQSLQALLEDDTLSK 205
Query: 373 VGVWIGGDADKIYNDYNIRIQSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNK 552
GV I DA K++ +YN+ ++ + E+S LAN+KL G ++W L ALTE L SKEL+KP++
Sbjct: 206 AGVGIASDASKVFKEYNVSVKPLNEISDLANQKLAGVPKKWGLRALTEMLISKELQKPDR 265
Query: 553 IRLGNWEVEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQEV 696
IRLGNWEV VLS+DQL YAATDAFASW L+EILK FP + + + + +
Sbjct: 266 IRLGNWEVAVLSKDQLQYAATDAFASWYLHEILKGFPHVEKVADSEPI 313