BLASTX nr result

ID: Coptis25_contig00002205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002205
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|2...   255   8e-66
ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndr...   254   1e-65
gb|AFK40115.1| unknown [Lotus japonicus]                              252   7e-65
ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-...   248   1e-63
ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-...   246   5e-63

>ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|222839339|gb|EEE77676.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  255 bits (652), Expect = 8e-66
 Identities = 122/215 (56%), Positives = 159/215 (73%)
 Frame = +1

Query: 31  PYFLRPHRVSVNTTMKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFMIGF 210
           P+ L P     N  M+YP  KFGG+I+Y RT  EVEKA  EL++ ++ +++ +DR +IGF
Sbjct: 97  PFSLSP--CQGNVKMRYPAMKFGGQILYSRTSIEVEKAARELLQSLEAEKREMDRVIIGF 154

Query: 211 DIEWKPTFKRGAVPRKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVKVGVWIG 390
           DIEWKP+F  G +P K AVMQIC + S C+V HI HSGI  +LQ  LED K VKVG+ IG
Sbjct: 155 DIEWKPSFTTGVLPGKAAVMQICANTSLCHVMHIFHSGITPSLQFLLEDSKLVKVGIGIG 214

Query: 391 GDADKIYNDYNIRIQSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNKIRLGNW 570
           GD  K++ DYN  ++S+E+LS LAN+KLDG  + W L AL + L  KEL+KPNKIRLGNW
Sbjct: 215 GDCAKVFRDYNASVKSVEDLSYLANQKLDGKPKTWGLQALAKILVCKELQKPNKIRLGNW 274

Query: 571 EVEVLSRDQLLYAATDAFASWQLYEILKTFPDLSE 675
           +V+VLS++QL YAATDAFASWQLY++LK+ PD  +
Sbjct: 275 QVDVLSKEQLQYAATDAFASWQLYQVLKSLPDAKD 309


>ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like
           exonuclease-like [Vitis vinifera]
          Length = 331

 Score =  254 bits (650), Expect = 1e-65
 Identities = 121/209 (57%), Positives = 157/209 (75%)
 Frame = +1

Query: 64  NTTMKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFMIGFDIEWKPTFKRG 243
           N  M+ P   FGG IVY RT +EVEKAT EL++ ++ K+K + + ++GFDIEW+PTF++G
Sbjct: 109 NFKMRLPKINFGGHIVYSRTVTEVEKATAELLKIVETKKKELGQAILGFDIEWRPTFRKG 168

Query: 244 AVPRKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVKVGVWIGGDADKIYNDYN 423
               K AVMQICG  S CYV HIIHSGIP NL S LEDP  +KVGV I  DA K++ D++
Sbjct: 169 VSQGKAAVMQICGGNSHCYVMHIIHSGIPRNLXSLLEDPTSIKVGVGIANDAVKVFKDHS 228

Query: 424 IRIQSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNKIRLGNWEVEVLSRDQLL 603
           + ++ +E+LS LAN+KL G  ++W L +LTE L SK+L KPNKIRLGNWE +VLS+ QL 
Sbjct: 229 VSVKDLEDLSYLANQKLGGDAKKWGLGSLTEMLISKQLLKPNKIRLGNWEADVLSKAQLE 288

Query: 604 YAATDAFASWQLYEILKTFPDLSEKQNEQ 690
           YAATDAFASW LYE+LK+FPD +E + E+
Sbjct: 289 YAATDAFASWYLYEVLKSFPDTAENKIEE 317


>gb|AFK40115.1| unknown [Lotus japonicus]
          Length = 209

 Score =  252 bits (644), Expect = 7e-65
 Identities = 117/202 (57%), Positives = 152/202 (75%)
 Frame = +1

Query: 73  MKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFMIGFDIEWKPTFKRGAVP 252
           M+ P  KF G+I Y R++ +V+KA  +L+E +++K++ + R  IGFDIEW+P+F RG  P
Sbjct: 1   MRLPVMKFSGQITYSRSFDDVQKAVTKLLEFVEEKKRAMMRIAIGFDIEWRPSFVRGVPP 60

Query: 253 RKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVKVGVWIGGDADKIYNDYNIRI 432
            K AVMQICGD S C+V H+IHSGIP NLQ  LEDP ++KVG  IG DA K++ DYN+ +
Sbjct: 61  GKVAVMQICGDTSHCHVLHLIHSGIPQNLQLLLEDPTFLKVGAGIGSDASKVFRDYNVSV 120

Query: 433 QSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNKIRLGNWEVEVLSRDQLLYAA 612
           + +E+LS  AN+KL G   +W LAALTET+ SK+L+KPNKIRLGNWE  VLS++QL YAA
Sbjct: 121 KGVEDLSFHANEKLGGGINKWGLAALTETVLSKQLKKPNKIRLGNWETPVLSKEQLQYAA 180

Query: 613 TDAFASWQLYEILKTFPDLSEK 678
           TDAFASW LYE +K  PD S K
Sbjct: 181 TDAFASWYLYEAIKNLPDSSGK 202


>ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 314

 Score =  248 bits (634), Expect = 1e-63
 Identities = 122/228 (53%), Positives = 163/228 (71%)
 Frame = +1

Query: 13  THGPPTPYFLRPHRVSVNTTMKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVD 192
           +H  P    L P RV  N+ M++P   +GGRI+Y RT SEV++A+ EL + I   +K +D
Sbjct: 88  SHQSPRFSPLSPCRV--NSKMRFPALNYGGRIIYSRTVSEVDRASRELAKKINSTRKAMD 145

Query: 193 RFMIGFDIEWKPTFKRGAVPRKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVK 372
           +  IGFDIEW+P+FKRG  P K AVMQ+C + S C+V HIIHSGIP +LQ+ LED    K
Sbjct: 146 QITIGFDIEWRPSFKRGVPPGKAAVMQLCLENSECHVMHIIHSGIPQSLQALLEDDTLSK 205

Query: 373 VGVWIGGDADKIYNDYNIRIQSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNK 552
            GV I  DA K++ +YN+ ++ + E+S LAN+KL G  ++W L ALTETL SKEL+KP++
Sbjct: 206 AGVGIASDASKVFKEYNVSVKPLNEISDLANQKLAGVPKKWGLRALTETLISKELQKPDR 265

Query: 553 IRLGNWEVEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQEV 696
           IRLGNWEV VLS+DQL YAATDAFASW L+EILK FP + +  + + +
Sbjct: 266 IRLGNWEVAVLSKDQLQYAATDAFASWYLHEILKGFPHVEKVADSEPI 313


>ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 314

 Score =  246 bits (628), Expect = 5e-63
 Identities = 121/228 (53%), Positives = 162/228 (71%)
 Frame = +1

Query: 13  THGPPTPYFLRPHRVSVNTTMKYPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVD 192
           +H  P    L P RV  N+ M++P   +GGRI+Y RT SEV++A+ EL + I   +K +D
Sbjct: 88  SHQSPRFSPLSPCRV--NSKMRFPALNYGGRIIYSRTVSEVDRASRELAKKINSTRKAMD 145

Query: 193 RFMIGFDIEWKPTFKRGAVPRKGAVMQICGDMSRCYVFHIIHSGIPINLQSFLEDPKYVK 372
           +  IGFDIEW+P+FKRG  P K AVMQ+C + S C+V HIIHSGIP +LQ+ LED    K
Sbjct: 146 QITIGFDIEWRPSFKRGVPPGKAAVMQLCLENSECHVMHIIHSGIPQSLQALLEDDTLSK 205

Query: 373 VGVWIGGDADKIYNDYNIRIQSIEELSCLANKKLDGFHRRWSLAALTETLTSKELEKPNK 552
            GV I  DA K++ +YN+ ++ + E+S LAN+KL G  ++W L ALTE L SKEL+KP++
Sbjct: 206 AGVGIASDASKVFKEYNVSVKPLNEISDLANQKLAGVPKKWGLRALTEMLISKELQKPDR 265

Query: 553 IRLGNWEVEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQEV 696
           IRLGNWEV VLS+DQL YAATDAFASW L+EILK FP + +  + + +
Sbjct: 266 IRLGNWEVAVLSKDQLQYAATDAFASWYLHEILKGFPHVEKVADSEPI 313


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