BLASTX nr result

ID: Coptis25_contig00002163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002163
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263167.1| PREDICTED: putative lipid-transfer protein D...   112   8e-23
gb|AFK37599.1| unknown [Lotus japonicus]                              108   9e-22
ref|XP_002527254.1| lipid binding protein, putative [Ricinus com...   105   1e-20
ref|XP_002301823.1| predicted protein [Populus trichocarpa] gi|1...   102   1e-19
gb|AEB33949.1| defective in induced resistance 1 protein [Nicoti...   100   3e-19

>ref|XP_002263167.1| PREDICTED: putative lipid-transfer protein DIR1 isoform 1 [Vitis
           vinifera] gi|359496447|ref|XP_003635239.1| PREDICTED:
           putative lipid-transfer protein DIR1 isoform 2 [Vitis
           vinifera]
          Length = 99

 Score =  112 bits (280), Expect = 8e-23
 Identities = 48/74 (64%), Positives = 60/74 (81%)
 Frame = -3

Query: 559 ITSSKALILCNLNQDDLITCKPAVTKPNPVDPTSDCCTALTKANLTCLCSYKNSMVLPLY 380
           +  S+   LCN+++DDL+TCKPAV+KP+PVDP+ +CC AL+ A+LTCLCSYKNS  LP  
Sbjct: 18  VEGSEGFSLCNMSEDDLMTCKPAVSKPSPVDPSPECCKALSGADLTCLCSYKNSETLPFL 77

Query: 379 GIDPDLAMKLPEKC 338
           GIDPDLAM LP KC
Sbjct: 78  GIDPDLAMALPSKC 91


>gb|AFK37599.1| unknown [Lotus japonicus]
          Length = 107

 Score =  108 bits (271), Expect = 9e-22
 Identities = 47/71 (66%), Positives = 57/71 (80%)
 Frame = -3

Query: 550 SKALILCNLNQDDLITCKPAVTKPNPVDPTSDCCTALTKANLTCLCSYKNSMVLPLYGID 371
           SK + LCN+N+D ++ CKP+VTKPNPVDP+ +CC ALT A+L CLCSYKNS  LPL GID
Sbjct: 29  SKGISLCNMNEDGIMACKPSVTKPNPVDPSPECCQALTGADLKCLCSYKNSSELPLLGID 88

Query: 370 PDLAMKLPEKC 338
           P LA+ LP KC
Sbjct: 89  PTLAVSLPAKC 99


>ref|XP_002527254.1| lipid binding protein, putative [Ricinus communis]
           gi|223533347|gb|EEF35098.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 102

 Score =  105 bits (262), Expect = 1e-20
 Identities = 47/72 (65%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
 Frame = -3

Query: 550 SKALILCNLNQDDLITCKPAVTKPNPVDPTSD-CCTALTKANLTCLCSYKNSMVLPLYGI 374
           S++L LC++N D L+ CKP+VTKP+PV+P S  CC ALT ANLTCLCSY+NS++LP  GI
Sbjct: 23  SRSLTLCDMNDDGLLACKPSVTKPDPVEPPSPACCQALTGANLTCLCSYRNSLMLPSLGI 82

Query: 373 DPDLAMKLPEKC 338
           DPDLA+ LP KC
Sbjct: 83  DPDLALGLPSKC 94


>ref|XP_002301823.1| predicted protein [Populus trichocarpa] gi|118484197|gb|ABK93979.1|
           unknown [Populus trichocarpa]
           gi|222843549|gb|EEE81096.1| predicted protein [Populus
           trichocarpa]
          Length = 102

 Score =  102 bits (253), Expect = 1e-19
 Identities = 45/72 (62%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
 Frame = -3

Query: 550 SKALILCNLNQDDLITCKPAVTKPNPVDPTS-DCCTALTKANLTCLCSYKNSMVLPLYGI 374
           S+A+ +C++++D L  CKP+VTKP+PV+P S DCC A++ AN TCLCSYKNS +LP  GI
Sbjct: 22  SRAVSVCDISEDGLAACKPSVTKPDPVEPPSVDCCKAVSGANFTCLCSYKNSYLLPYLGI 81

Query: 373 DPDLAMKLPEKC 338
           DPDLAM LP KC
Sbjct: 82  DPDLAMALPSKC 93


>gb|AEB33949.1| defective in induced resistance 1 protein [Nicotiana tabacum]
          Length = 104

 Score =  100 bits (249), Expect = 3e-19
 Identities = 42/71 (59%), Positives = 55/71 (77%)
 Frame = -3

Query: 550 SKALILCNLNQDDLITCKPAVTKPNPVDPTSDCCTALTKANLTCLCSYKNSMVLPLYGID 371
           +  L LCN+  D L  CKP+VTKPNPV+P++ CC AL+ A+L CLCSY+NS++LP  GID
Sbjct: 26  TNGLSLCNMGDDGLTACKPSVTKPNPVEPSASCCEALSGADLQCLCSYRNSLLLPSLGID 85

Query: 370 PDLAMKLPEKC 338
           P+LA+ LP KC
Sbjct: 86  PELALALPPKC 96


Top