BLASTX nr result

ID: Coptis25_contig00002160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002160
         (1633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280143.1| PREDICTED: serine incorporator 3 isoform 1 [...   520   e-160
ref|XP_003631983.1| PREDICTED: serine incorporator 3 isoform 2 [...   516   e-158
ref|XP_002312742.1| predicted protein [Populus trichocarpa] gi|2...   508   e-155
ref|XP_002516786.1| Membrane protein PB1A10.07c, putative [Ricin...   508   e-155
ref|XP_004150322.1| PREDICTED: serine incorporator 3-like [Cucum...   503   e-151

>ref|XP_002280143.1| PREDICTED: serine incorporator 3 isoform 1 [Vitis vinifera]
            gi|297736976|emb|CBI26177.3| unnamed protein product
            [Vitis vinifera]
          Length = 411

 Score =  520 bits (1339), Expect(2) = e-160
 Identities = 251/356 (70%), Positives = 290/356 (81%)
 Frame = +1

Query: 325  WINPSTHHPSKEWYQENAVFRVSLANFLFFGVLSLIMIGVKDQNDRRDSWHHGGWILKTV 504
            WI+ S  H S EWYQ+ AV RVSL NFLFF + +LIMIGVKDQNDRRDSWHHGGW+ K V
Sbjct: 59   WISTSQTH-STEWYQQEAVLRVSLGNFLFFAIFALIMIGVKDQNDRRDSWHHGGWVAKMV 117

Query: 505  VWALLIILMFFLPNVVITIYEKISIFGSGLFLLVQVIMLLDFTYTWNDSWVEKDEQKWYA 684
            +W LLIILMFF+PNVVI+IY  +S FG+GLFLLVQVI+LLDFT++WND+WVEKDEQKWY 
Sbjct: 118  IWVLLIILMFFVPNVVISIYGTLSKFGAGLFLLVQVIILLDFTHSWNDAWVEKDEQKWYI 177

Query: 685  ALLAVSVGCYIAAFTFSGLLFIWFNPAGQDCGLNVFFIVMTMILAFGYAMLALHPQVNGS 864
            ALLAVS+GCY+ AFTFSG+LFIWFNP+G DCGLN+FFIVMTMILAF +A++ALHP+VNGS
Sbjct: 178  ALLAVSIGCYLLAFTFSGILFIWFNPSGNDCGLNIFFIVMTMILAFSFAVIALHPRVNGS 237

Query: 865  LLPASVISVYSAYLLYTALSSEPRDYICNGLHKKSKGVSTSTLILGMLTTILSVMYSAIR 1044
            LLPASVIS+Y AY+ YT LSSEPRDY CNGLH KSK VSTSTLILGMLTT+LSV+YSA+R
Sbjct: 238  LLPASVISLYCAYVCYTGLSSEPRDYACNGLHNKSKAVSTSTLILGMLTTVLSVLYSAVR 297

Query: 1045 AGXXXXXXXXXXXXXXXXXXXLLQSXXXXXXXXXXXXXXARPVAYSYMFFHLIFALASMY 1224
            AG                   LL+S              A+PV+YSY FFHLIFALASMY
Sbjct: 298  AGSSTTFLSPPSSPKSGGKKPLLES-EDTESGKEKKEEEAKPVSYSYTFFHLIFALASMY 356

Query: 1225 SGMLLTGWSSSQSDGSDLIDVGWTTVWVRICTQWVTGALYVWSLLAPLIMPDREFF 1392
            S MLL+GW+SS +D SD+IDVGWT+VWVRICT+WVT  LYVWSLLAP++ PDREFF
Sbjct: 357  SAMLLSGWTSS-NDSSDMIDVGWTSVWVRICTEWVTALLYVWSLLAPILFPDREFF 411



 Score = 72.0 bits (175), Expect(2) = e-160
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = +3

Query: 150 VASGISKRSARLAYCGLFGLSLIISWILREVAEPLLKKI 266
           VASGISKRSARLAYCGLFG SLI+SWILREVA PLLKKI
Sbjct: 19  VASGISKRSARLAYCGLFGGSLIVSWILREVAAPLLKKI 57


>ref|XP_003631983.1| PREDICTED: serine incorporator 3 isoform 2 [Vitis vinifera]
          Length = 409

 Score =  516 bits (1328), Expect(2) = e-158
 Identities = 251/356 (70%), Positives = 290/356 (81%)
 Frame = +1

Query: 325  WINPSTHHPSKEWYQENAVFRVSLANFLFFGVLSLIMIGVKDQNDRRDSWHHGGWILKTV 504
            WI+ S  H S EWYQ+ AV RVSL NFLFF + +LIMIGVKDQNDRRDSWHHGGW+ K V
Sbjct: 59   WISTSQTH-STEWYQQEAVLRVSLGNFLFFAIFALIMIGVKDQNDRRDSWHHGGWVAKMV 117

Query: 505  VWALLIILMFFLPNVVITIYEKISIFGSGLFLLVQVIMLLDFTYTWNDSWVEKDEQKWYA 684
            +W LLIILMFF+PNVVI+IY  +S FG+GLFLLVQVI+LLDFT++WND+WVEKDEQKWY 
Sbjct: 118  IWVLLIILMFFVPNVVISIYGTLSKFGAGLFLLVQVIILLDFTHSWNDAWVEKDEQKWYI 177

Query: 685  ALLAVSVGCYIAAFTFSGLLFIWFNPAGQDCGLNVFFIVMTMILAFGYAMLALHPQVNGS 864
            ALLAVS+GCY+ AFTFSG+LFIWFNP+G DCGLN+FFIVMTMILAF +A++ALHP+VNGS
Sbjct: 178  ALLAVSIGCYLLAFTFSGILFIWFNPSGNDCGLNIFFIVMTMILAFSFAVIALHPRVNGS 237

Query: 865  LLPASVISVYSAYLLYTALSSEPRDYICNGLHKKSKGVSTSTLILGMLTTILSVMYSAIR 1044
            LLPASVIS+Y AY+ YT LSSEPRDY CNGLH KSK VSTSTLILGMLTT+LSV+YSA+R
Sbjct: 238  LLPASVISLYCAYVCYTGLSSEPRDYACNGLHNKSKAVSTSTLILGMLTTVLSVLYSAVR 297

Query: 1045 AGXXXXXXXXXXXXXXXXXXXLLQSXXXXXXXXXXXXXXARPVAYSYMFFHLIFALASMY 1224
            AG                   LL+S              A+PV+YSY FFHLIFALASMY
Sbjct: 298  AG--SSTTFLSPPSSPKSEKPLLES-EDTESGKEKKEEEAKPVSYSYTFFHLIFALASMY 354

Query: 1225 SGMLLTGWSSSQSDGSDLIDVGWTTVWVRICTQWVTGALYVWSLLAPLIMPDREFF 1392
            S MLL+GW+SS +D SD+IDVGWT+VWVRICT+WVT  LYVWSLLAP++ PDREFF
Sbjct: 355  SAMLLSGWTSS-NDSSDMIDVGWTSVWVRICTEWVTALLYVWSLLAPILFPDREFF 409



 Score = 72.0 bits (175), Expect(2) = e-158
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = +3

Query: 150 VASGISKRSARLAYCGLFGLSLIISWILREVAEPLLKKI 266
           VASGISKRSARLAYCGLFG SLI+SWILREVA PLLKKI
Sbjct: 19  VASGISKRSARLAYCGLFGGSLIVSWILREVAAPLLKKI 57


>ref|XP_002312742.1| predicted protein [Populus trichocarpa] gi|222852562|gb|EEE90109.1|
            predicted protein [Populus trichocarpa]
          Length = 417

 Score =  508 bits (1308), Expect(2) = e-155
 Identities = 246/357 (68%), Positives = 284/357 (79%), Gaps = 1/357 (0%)
 Frame = +1

Query: 325  WINPSTHHPSKEWYQENAVFRVSLANFLFFGVLSLIMIGVKDQNDRRDSWHHGGWILKTV 504
            WI  S  HP KEWYQ  AV RVS+ NFLFF VL+LIMIGVKDQNDRRDSWHHGGWI K V
Sbjct: 63   WIKSSGTHP-KEWYQIQAVLRVSMGNFLFFAVLALIMIGVKDQNDRRDSWHHGGWIAKMV 121

Query: 505  VWALLIILMFFLPNVVITIYEKISIFGSGLFLLVQVIMLLDFTYTWNDSWVEKDEQKWYA 684
            +W LL++LMFFLP+ VI++Y  +S FG+GLFLLVQVI+LLDFT+TWND+WVEKDEQKWY 
Sbjct: 122  IWLLLVVLMFFLPDSVISVYGILSKFGAGLFLLVQVIILLDFTHTWNDAWVEKDEQKWYI 181

Query: 685  ALLAVSVGCYIAAFTFSGLLFIWFNPAGQDCGLNVFFIVMTMILAFGYAMLALHPQVNGS 864
            ALL+VSVGCY+AAFTFSG+LF+WFNP+G DCGLNVFFIVMTMILAF +A++ALHP VNGS
Sbjct: 182  ALLSVSVGCYLAAFTFSGILFMWFNPSGHDCGLNVFFIVMTMILAFAFAVIALHPAVNGS 241

Query: 865  LLPASVISVYSAYLLYTALSSEPRDYICNGLHKKSKGVSTSTLILGMLTTILSVMYSAIR 1044
            LLPASVIS+Y AY+ YT LSSEP DY CNGLH KSK VSTSTL+LGMLTTILSV+YSA+R
Sbjct: 242  LLPASVISIYCAYVCYTGLSSEPHDYACNGLHNKSKAVSTSTLVLGMLTTILSVLYSAVR 301

Query: 1045 AG-XXXXXXXXXXXXXXXXXXXLLQSXXXXXXXXXXXXXXARPVAYSYMFFHLIFALASM 1221
            AG                    LL++               +PV+YSY FFHLIFALASM
Sbjct: 302  AGSSTTFLSPPSSPKASAGKKPLLEAEELEEGKEKKKEAEGQPVSYSYTFFHLIFALASM 361

Query: 1222 YSGMLLTGWSSSQSDGSDLIDVGWTTVWVRICTQWVTGALYVWSLLAPLIMPDREFF 1392
            YS MLL+GW+ + S+ S LIDVGWT+VWVRICT+W+TG LY W+LLAPL  PDREFF
Sbjct: 362  YSAMLLSGWTDT-SESSSLIDVGWTSVWVRICTEWITGLLYTWTLLAPLFFPDREFF 417



 Score = 69.3 bits (168), Expect(2) = e-155
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = +3

Query: 150 VASGISKRSARLAYCGLFGLSLIISWILREVAEPLLKKI 266
           VASGIS RSARLAYCGLFG SLI+SWILREVA PLL+KI
Sbjct: 23  VASGISNRSARLAYCGLFGTSLILSWILREVAAPLLEKI 61


>ref|XP_002516786.1| Membrane protein PB1A10.07c, putative [Ricinus communis]
            gi|223543874|gb|EEF45400.1| Membrane protein PB1A10.07c,
            putative [Ricinus communis]
          Length = 414

 Score =  508 bits (1308), Expect(2) = e-155
 Identities = 250/356 (70%), Positives = 283/356 (79%)
 Frame = +1

Query: 325  WINPSTHHPSKEWYQENAVFRVSLANFLFFGVLSLIMIGVKDQNDRRDSWHHGGWILKTV 504
            WI  S  H SKEW+Q  AV RVSL NFLFF + +LIMIGVKDQNDRRDSWHHGGWI K V
Sbjct: 62   WIKSSVTH-SKEWFQIQAVLRVSLGNFLFFAIFALIMIGVKDQNDRRDSWHHGGWIAKMV 120

Query: 505  VWALLIILMFFLPNVVITIYEKISIFGSGLFLLVQVIMLLDFTYTWNDSWVEKDEQKWYA 684
            +W LL++LMFF+PNVVI IY  IS FG+GLFLLVQVI+LLDFT++WND+WVEKDEQKWY 
Sbjct: 121  IWLLLLVLMFFMPNVVIAIYGIISKFGAGLFLLVQVIILLDFTHSWNDAWVEKDEQKWYI 180

Query: 685  ALLAVSVGCYIAAFTFSGLLFIWFNPAGQDCGLNVFFIVMTMILAFGYAMLALHPQVNGS 864
            ALL VSV CY+AAF FSG+LFIWFNP+GQDCGLN+FFIVMTMILAF +A++ALHP VNGS
Sbjct: 181  ALLVVSVVCYLAAFAFSGVLFIWFNPSGQDCGLNIFFIVMTMILAFVFAIIALHPTVNGS 240

Query: 865  LLPASVISVYSAYLLYTALSSEPRDYICNGLHKKSKGVSTSTLILGMLTTILSVMYSAIR 1044
            LLPASVIS+Y AY+ YT LSSEP DY+CNGLH K+K VSTSTLILGMLTTILSV+YSA+R
Sbjct: 241  LLPASVISIYCAYVCYTGLSSEPHDYVCNGLHNKTKAVSTSTLILGMLTTILSVLYSAVR 300

Query: 1045 AGXXXXXXXXXXXXXXXXXXXLLQSXXXXXXXXXXXXXXARPVAYSYMFFHLIFALASMY 1224
            AG                    L                ARPV+YSY FFHLIFALASMY
Sbjct: 301  AGSSTTFLSPPSSPKASDAKKPLLE-EQLEEGKEKKETEARPVSYSYTFFHLIFALASMY 359

Query: 1225 SGMLLTGWSSSQSDGSDLIDVGWTTVWVRICTQWVTGALYVWSLLAPLIMPDREFF 1392
            S MLL+GW+SS S+ SDLIDVGWT+VWVRICT+WVT  LYVW+LLAPL+ PDREFF
Sbjct: 360  SAMLLSGWTSS-SESSDLIDVGWTSVWVRICTEWVTAGLYVWTLLAPLLFPDREFF 414



 Score = 67.4 bits (163), Expect(2) = e-155
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +3

Query: 150 VASGISKRSARLAYCGLFGLSLIISWILREVAEPLLKKI 266
           VASGISK+SARLAYCGLFGLSLI+SWILRE   PL++K+
Sbjct: 22  VASGISKKSARLAYCGLFGLSLIVSWILREFGAPLIEKL 60


>ref|XP_004150322.1| PREDICTED: serine incorporator 3-like [Cucumis sativus]
          Length = 411

 Score =  503 bits (1294), Expect(2) = e-151
 Identities = 238/356 (66%), Positives = 281/356 (78%)
 Frame = +1

Query: 325  WINPSTHHPSKEWYQENAVFRVSLANFLFFGVLSLIMIGVKDQNDRRDSWHHGGWILKTV 504
            WI   T    +EW+Q  AV RVSL NFLFF +L+LIMIGVKDQNDRRD+WHHGGW+ K V
Sbjct: 59   WIK--TEGQPEEWFQMQAVLRVSLGNFLFFAILALIMIGVKDQNDRRDAWHHGGWMAKMV 116

Query: 505  VWALLIILMFFLPNVVITIYEKISIFGSGLFLLVQVIMLLDFTYTWNDSWVEKDEQKWYA 684
            +W LL++LMFFLPNV+ +IY  +SIFG+GLFLLVQV++LLDFT++WNDSWVEKDEQKWY 
Sbjct: 117  IWILLVVLMFFLPNVIFSIYGVLSIFGAGLFLLVQVVLLLDFTHSWNDSWVEKDEQKWYV 176

Query: 685  ALLAVSVGCYIAAFTFSGLLFIWFNPAGQDCGLNVFFIVMTMILAFGYAMLALHPQVNGS 864
            ALL VS+GCY+  + FSGLLFIWFNP+G DCGLNVFF+VMTMILAF +A++ALHP VNGS
Sbjct: 177  ALLVVSIGCYLGTYIFSGLLFIWFNPSGHDCGLNVFFLVMTMILAFVFAVIALHPAVNGS 236

Query: 865  LLPASVISVYSAYLLYTALSSEPRDYICNGLHKKSKGVSTSTLILGMLTTILSVMYSAIR 1044
            LLPASVISVY AY+ YT LSSEPRDY+CN LH KSK VS  TL+LGMLTT+LSV+YSA+R
Sbjct: 237  LLPASVISVYCAYVCYTGLSSEPRDYVCNDLHTKSKAVSVGTLVLGMLTTVLSVIYSALR 296

Query: 1045 AGXXXXXXXXXXXXXXXXXXXLLQSXXXXXXXXXXXXXXARPVAYSYMFFHLIFALASMY 1224
            AG                   LL+S               +PV+YSY FFHLIFALASMY
Sbjct: 297  AGSSTTFLSPPSSPRAGGSKPLLESEDLEDGKNKKTEGEGQPVSYSYTFFHLIFALASMY 356

Query: 1225 SGMLLTGWSSSQSDGSDLIDVGWTTVWVRICTQWVTGALYVWSLLAPLIMPDREFF 1392
            S MLL+GW +S ++ SDLIDVGWT+VWVRICT+WVTG LY+WSL+APL+ PDREFF
Sbjct: 357  SAMLLSGW-TSLNESSDLIDVGWTSVWVRICTEWVTGGLYIWSLVAPLLFPDREFF 411



 Score = 61.2 bits (147), Expect(2) = e-151
 Identities = 26/39 (66%), Positives = 35/39 (89%)
 Frame = +3

Query: 150 VASGISKRSARLAYCGLFGLSLIISWILREVAEPLLKKI 266
           VA+GIS+ SARLAYCGLFG+SL++SWILRE   P+++K+
Sbjct: 19  VAAGISRSSARLAYCGLFGVSLVVSWILREFGAPIMEKM 57


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