BLASTX nr result
ID: Coptis25_contig00002159
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002159 (1121 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADE77038.1| unknown [Picea sitchensis] 238 2e-60 ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni... 236 6e-60 emb|CBI30239.3| unnamed protein product [Vitis vinifera] 236 6e-60 gb|ABR17193.1| unknown [Picea sitchensis] 234 3e-59 gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus] 234 3e-59 >gb|ADE77038.1| unknown [Picea sitchensis] Length = 334 Score = 238 bits (607), Expect = 2e-60 Identities = 111/136 (81%), Positives = 120/136 (88%) Frame = +1 Query: 52 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 231 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHT+PSISPT+LLSNMYQRPDM+TP Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPSISPTILLSNMYQRPDMITP 60 Query: 232 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 411 GMDPQG A+DP++IQ KYGEIESLN+CDNLADHMVGNVYVQFREEE Sbjct: 61 GMDPQGHALDPQKIQEHFEDFYEDLFEELGKYGEIESLNVCDNLADHMVGNVYVQFREEE 120 Query: 412 HAAAAVQSLTGRFYAG 459 HAAAA+Q+LTGRFYAG Sbjct: 121 HAAAALQALTGRFYAG 136 >ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis vinifera] Length = 343 Score = 236 bits (603), Expect = 6e-60 Identities = 113/136 (83%), Positives = 119/136 (87%) Frame = +1 Query: 52 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 231 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60 Query: 232 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 411 G+DPQGQ +DPR+IQ SKYGEIESLNICDNLADHMVGNVYVQFREEE Sbjct: 61 GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120 Query: 412 HAAAAVQSLTGRFYAG 459 HAA A+++L GRFYAG Sbjct: 121 HAANALRNLNGRFYAG 136 Score = 68.2 bits (165), Expect = 4e-09 Identities = 33/73 (45%), Positives = 46/73 (63%) Frame = +2 Query: 881 PARDGSAERRARIEQWNREKEQAESGNKNNDKHPSSDDYEKNGYSPNGEQFYDQNHHXXX 1060 P R+GSAERRA+IEQWNRE+EQAE+ NKN++ H S + N + + +Q+Y+ H Sbjct: 273 PVREGSAERRAKIEQWNREREQAEATNKNDNSH-SDNGNNNNDFEQDDQQYYNPQHQ-EE 330 Query: 1061 XXXXXXXEGGYDY 1099 GGY+Y Sbjct: 331 DQQQQQQHGGYNY 343 >emb|CBI30239.3| unnamed protein product [Vitis vinifera] Length = 191 Score = 236 bits (603), Expect = 6e-60 Identities = 113/136 (83%), Positives = 119/136 (87%) Frame = +1 Query: 52 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 231 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60 Query: 232 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 411 G+DPQGQ +DPR+IQ SKYGEIESLNICDNLADHMVGNVYVQFREEE Sbjct: 61 GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120 Query: 412 HAAAAVQSLTGRFYAG 459 HAA A+++L GRFYAG Sbjct: 121 HAANALRNLNGRFYAG 136 >gb|ABR17193.1| unknown [Picea sitchensis] Length = 344 Score = 234 bits (597), Expect = 3e-59 Identities = 110/135 (81%), Positives = 117/135 (86%) Frame = +1 Query: 52 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 231 MAEHLASIFGTEKDRVNCPFYFKIG CRHGDRCSRLHT+PSISPTLLLSNMYQRPDM+TP Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHTRPSISPTLLLSNMYQRPDMITP 60 Query: 232 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 411 GMDPQG A+DPR+IQ KYG IESLN+CDNLADHMVGNVYVQFREEE Sbjct: 61 GMDPQGHALDPRKIQEHFEDFYEDLFEELGKYGAIESLNVCDNLADHMVGNVYVQFREEE 120 Query: 412 HAAAAVQSLTGRFYA 456 HAAAA+Q+LTGRFYA Sbjct: 121 HAAAALQALTGRFYA 135 >gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus] Length = 310 Score = 234 bits (597), Expect = 3e-59 Identities = 110/136 (80%), Positives = 119/136 (87%) Frame = +1 Query: 52 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 231 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPDM+TP Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60 Query: 232 GMDPQGQAMDPRRIQXXXXXXXXXXXXXXSKYGEIESLNICDNLADHMVGNVYVQFREEE 411 G+DPQGQ +DPR+IQ SKYGEIESLNICDNLADHMVGNVYVQFREEE Sbjct: 61 GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120 Query: 412 HAAAAVQSLTGRFYAG 459 HA A+++L+GRFYAG Sbjct: 121 HAGEALRNLSGRFYAG 136 Score = 67.0 bits (162), Expect = 8e-09 Identities = 44/146 (30%), Positives = 56/146 (38%) Frame = +2 Query: 602 GGYCNFMHLKKISXXXXXXXXXXXXXXXXXXXXXXPHKNRNYEEXXXXXXXXXXXXXXXX 781 GGYCNFMHLKKIS P +R + + Sbjct: 165 GGYCNFMHLKKISRELRRQLFGRYRRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDDRN 224 Query: 782 XXXXNRVXXXXXXXXXXXXXXXXXXXXXXXXXPPARDGSAERRARIEQWNREKEQAESGN 961 ++ P R+ S ERRA+I QWNREKEQA++G Sbjct: 225 QRYHDK--GRRPRSRSPGHRGRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQADTG- 281 Query: 962 KNNDKHPSSDDYEKNGYSPNGEQFYD 1039 NND + D NG+ NGE +YD Sbjct: 282 -NNDVNHDVTDNHANGFQDNGEDYYD 306