BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002158
         (1634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vit...   335   2e-89
emb|CBI39159.3| unnamed protein product [Vitis vinifera]              328   3e-87
ref|XP_002321112.1| predicted protein [Populus trichocarpa] gi|2...   302   1e-79
ref|XP_002527387.1| DNA binding protein, putative [Ricinus commu...   285   2e-74
ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like...   258   3e-66

>ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
          Length = 357

 Score =  335 bits (859), Expect = 2e-89
 Identities = 199/357 (55%), Positives = 240/357 (67%), Gaps = 7/357 (1%)
 Frame = -3

Query: 1485 SSHNKPTGPPSLSRYGSAPGSFLASVVESVINGTDDEFSNVGSESLM-NRFLTGXXXXXX 1309
            SS ++      L RYGSAPGS L S V+S+++ TD EFS +GS  +M +++ +G      
Sbjct: 8    SSSHRSLHSSGLIRYGSAPGSLLTSAVDSLVS-TDREFSPLGSHHIMPHQYFSGDSSSES 66

Query: 1308 XXXXXACKAPPAPQTEIYRGGG----LQRSYGLNQLAVGDLATAN-IRXXXXXXXXXXXX 1144
                  CK    P  +    GG    LQRSYG +++ V   +TA+ ++            
Sbjct: 67   T-----CKVAAPPDHKEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGGGEGGGGGGSA 121

Query: 1143 XSLIRHSSSPAGFFNHLVVDN-GFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDS 967
             SLIRHSSSPAGF N L  DN GF+V+RG G+Y+SQ G  N G G  RL SQLSF RQDS
Sbjct: 122  PSLIRHSSSPAGFLNQLTADNCGFSVTRGTGNYSSQGGC-NGGHGISRLKSQLSFKRQDS 180

Query: 966  LSQIXXXXXXXXXXXXXXXXGRNAGQGYVSAGSFPMGSWDDSSNTIMFSTPANKRAKNMN 787
            LSQI                 RNA   Y +A SFPM +WD++ NTI+FST  NKRAKN+N
Sbjct: 181  LSQISEVSENMVDGISSDNGHRNATHSYATA-SFPMDAWDNT-NTIVFSTTPNKRAKNIN 238

Query: 786  GDIAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERR 607
            GDI  +LS ++ QFSLP+TSLEM+ VEKLLQ+  DSVPCK RAKRG ATHPRSIAERERR
Sbjct: 239  GDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERR 298

Query: 606  TRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 436
            TRIS KL+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EVQKLNK+L++CTCG KQ
Sbjct: 299  TRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCGCKQ 355


>emb|CBI39159.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  328 bits (841), Expect = 3e-87
 Identities = 196/356 (55%), Positives = 237/356 (66%), Gaps = 6/356 (1%)
 Frame = -3

Query: 1485 SSHNKPTGPPSLSRYGSAPGSFLASVVESVINGTDDEFSNVGSESLM-NRFLTGXXXXXX 1309
            SS ++      L RYGSAPGS L S V+S+++ TD EFS +GS  +M +++ +G      
Sbjct: 65   SSSHRSLHSSGLIRYGSAPGSLLTSAVDSLVS-TDREFSPLGSHHIMPHQYFSGDSSSES 123

Query: 1308 XXXXXACKAPPAPQTEIYRGGG----LQRSYGLNQLAVGDLATAN-IRXXXXXXXXXXXX 1144
                  CK    P  +    GG    LQRSYG +++ V   +TA+ ++            
Sbjct: 124  T-----CKVAAPPDHKEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGGGEGGGGGGSA 178

Query: 1143 XSLIRHSSSPAGFFNHLVVDNGFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSL 964
             SLIRHSSSPAGF N L  DN   ++RG G+Y+SQ G  N G G  RL SQLSF RQDSL
Sbjct: 179  PSLIRHSSSPAGFLNQLTADN---LTRGTGNYSSQGGC-NGGHGISRLKSQLSFKRQDSL 234

Query: 963  SQIXXXXXXXXXXXXXXXXGRNAGQGYVSAGSFPMGSWDDSSNTIMFSTPANKRAKNMNG 784
            SQI                 RNA   Y +A SFPM +WD++ NTI+FST  NKRAKN+NG
Sbjct: 235  SQISEVSENMVDGISSDNGHRNATHSYATA-SFPMDAWDNT-NTIVFSTTPNKRAKNING 292

Query: 783  DIAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRT 604
            DI  +LS ++ QFSLP+TSLEM+ VEKLLQ+  DSVPCK RAKRG ATHPRSIAERERRT
Sbjct: 293  DILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRT 352

Query: 603  RISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 436
            RIS KL+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EVQKLNK+L++CTCG KQ
Sbjct: 353  RISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCGCKQ 408


>ref|XP_002321112.1| predicted protein [Populus trichocarpa] gi|222861885|gb|EEE99427.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  302 bits (774), Expect = 1e-79
 Identities = 187/357 (52%), Positives = 226/357 (63%), Gaps = 7/357 (1%)
 Frame = -3

Query: 1485 SSHNKPTGPPSLSRYGSAPGSFLASVVESVINGTDDEFSNVGSESLMNRFLTGXXXXXXX 1306
            SS  K   P  L+RYGSAPGSFL   V+SVI G D E S +GS  L+ R           
Sbjct: 10   SSPQKSNLPSGLTRYGSAPGSFLTRAVDSVI-GADRELSGLGSTPLVGRQQHFSGDSPSI 68

Query: 1305 XXXXACKAPP------APQTEIYRGGGLQRSYGLNQLAVGDLATANIRXXXXXXXXXXXX 1144
                 CK         AP++    GGGLQRSYGLN++A G                    
Sbjct: 69   TSESTCKVNSSSCDRKAPKSG--GGGGLQRSYGLNEIAHG-------------------A 107

Query: 1143 XSLIRHSSSPAGFFNHLVVDNG-FTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDS 967
             SL+R  SSPAGF +HL  +NG F+++RG G YNS+ GS   G G  RL SQLSFTRQDS
Sbjct: 108  GSLVRQRSSPAGFLSHLATENGGFSITRGTGGYNSRNGS---GGGPSRLKSQLSFTRQDS 164

Query: 966  LSQIXXXXXXXXXXXXXXXXGRNAGQGYVSAGSFPMGSWDDSSNTIMFSTPANKRAKNMN 787
            LSQI                 +N+   Y SA SF M SWD + N+I+FS   +K+A+  +
Sbjct: 165  LSQISEVSENVVEGIGSDNGSQNSTHSY-SAASFGMESWD-TPNSIVFSGHPSKQARTGD 222

Query: 786  GDIAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERR 607
            GDI +  + +++QFSLP+TSLEM+ VEKLLQI  DSVPCK RAKRG ATHPRSIAERERR
Sbjct: 223  GDIYSCFNALETQFSLPQTSLEMATVEKLLQIPEDSVPCKIRAKRGCATHPRSIAERERR 282

Query: 606  TRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 436
            TRIS KL+ LQ+LVPNMDKQTS ADML+LAV+HIKGLQ EV+KL+K+L+ CTCG KQ
Sbjct: 283  TRISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNEVEKLHKELEGCTCGCKQ 339


>ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
            gi|223533239|gb|EEF34994.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 377

 Score =  285 bits (729), Expect = 2e-74
 Identities = 175/355 (49%), Positives = 213/355 (60%), Gaps = 11/355 (3%)
 Frame = -3

Query: 1470 PTGPPSLSRYGSAPGSFLASVVESVINGT----------DDEFSNVGSESLMNRFLTGXX 1321
            P     L+R+GSAPGSFL   V+SVI  T          ++  +N  + S    F  G  
Sbjct: 47   PASGSGLTRFGSAPGSFLTRAVDSVIGTTTSGRDFSALVNNNSNNNNNNSHHQYFSAGDS 106

Query: 1320 XXXXXXXXXACKAPPAPQTEIYRGGGLQRSYGLNQLAVGDLATANIRXXXXXXXXXXXXX 1141
                      CK   +         GLQRSYG N++                        
Sbjct: 107  SSLTTEST--CKVNSSNDLRAPAKSGLQRSYGFNEI----------------------NG 142

Query: 1140 SLIRHSSSPAGFFNH-LVVDNGFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSL 964
            SL+R  SSPAGF +H L  +NGF+++ G G YNS  G  N G    RL SQLSFTRQDSL
Sbjct: 143  SLLRQKSSPAGFLSHHLANENGFSITPGTGGYNSSNGP-NGGHTVSRLKSQLSFTRQDSL 201

Query: 963  SQIXXXXXXXXXXXXXXXXGRNAGQGYVSAGSFPMGSWDDSSNTIMFSTPANKRAKNMNG 784
            SQI                  N+   Y + G F MGSWD  +N+I+FS P +KR KN++G
Sbjct: 202  SQISEVSEDIVEGINSNTGHHNSPHSYSTTG-FGMGSWD-GTNSIVFSGPPSKRMKNIDG 259

Query: 783  DIAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRT 604
            D+   L+G+++QFSLP+TSLEM+ VEKLL I  DSVPCK RAKRG ATHPRSIAERERRT
Sbjct: 260  DLFNCLNGLETQFSLPQTSLEMATVEKLLNIPEDSVPCKIRAKRGCATHPRSIAERERRT 319

Query: 603  RISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSK 439
            RIS +L+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EVQKL+K+L++CTCG K
Sbjct: 320  RISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGEVQKLHKELENCTCGCK 374


>ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
          Length = 370

 Score =  258 bits (659), Expect = 3e-66
 Identities = 166/367 (45%), Positives = 211/367 (57%), Gaps = 12/367 (3%)
 Frame = -3

Query: 1500 KPMYRSSHNKPTGPPSLSRYGSAPGSFLASVVESVINGT---DDEFSNVGSESLMNRFLT 1330
            K M  +    P     L+RYGSAPGSFL + V+SVI GT   D   +     S    + +
Sbjct: 13   KSMSSAHGGAPASAGGLTRYGSAPGSFLTTAVDSVI-GTRQPDSAATLRAPPSFGAHYFS 71

Query: 1329 GXXXXXXXXXXXACKAPPAP---QTEIYRGGGLQRSYGLNQLAVGDLATANIRXXXXXXX 1159
                          ++       ++       L RSYG N LA+GD +T   R       
Sbjct: 72   SADSSVVESSRKVVQSSSTSNDLKSSSATAAALNRSYGFNDLALGDFSTG--RNFNSNGG 129

Query: 1158 XXXXXXSLIRHSSSPAGFFNHLVVDNGFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFT 979
                   L+R  SSPAGF  HL      +V+   G ++   G    G G GRL SQ+SF 
Sbjct: 130  QSSSSSPLVRQRSSPAGFLGHL------SVAEPNGGFSLTMGGGGGGNGGGRLKSQMSFN 183

Query: 978  RQD-SLSQIXXXXXXXXXXXXXXXXG----RNAGQGYVSAGSFPM-GSWDDSSNTIMFST 817
             QD SLSQI                G     N+   +  + +F M  SWD SSN+I+F+ 
Sbjct: 184  GQDNSLSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDSSWDTSSNSIVFAA 243

Query: 816  PANKRAKNMNGDIAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATH 637
            P  KR+K+ +   A   +G++SQFSLP+T+LEM+ VE+LLQI  DSVPCK RAKRG ATH
Sbjct: 244  PHAKRSKHHSD--ADFFTGLESQFSLPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATH 301

Query: 636  PRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDH 457
            PRSIAERERRTRIS KL+KLQELVPNMDKQTS +DMLDLAVQHIKGLQ ++QKLNK++++
Sbjct: 302  PRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVEN 361

Query: 456  CTCGSKQ 436
            CTCGSK+
Sbjct: 362  CTCGSKE 368