BLASTX nr result
ID: Coptis25_contig00002151
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002151 (1110 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511471.1| two-component sensor protein histidine prote... 229 9e-58 gb|AFK41993.1| unknown [Lotus japonicus] 215 2e-53 ref|XP_002322145.1| type-a arp3-like response regulator [Populus... 214 3e-53 ref|XP_002322144.1| type-a response regulator [Populus trichocar... 214 3e-53 gb|AAQ10675.1| type-A response regulator [Catharanthus roseus] 213 7e-53 >ref|XP_002511471.1| two-component sensor protein histidine protein kinase, putative [Ricinus communis] gi|223550586|gb|EEF52073.1| two-component sensor protein histidine protein kinase, putative [Ricinus communis] Length = 221 Score = 229 bits (584), Expect = 9e-58 Identities = 122/159 (76%), Positives = 136/159 (85%), Gaps = 1/159 (0%) Frame = +3 Query: 228 SDTETHELHVLAVDDSLIDRKVIERLLKISCCKVTVADSGRMALQYLGLDGE-TNVGFNA 404 S + ELHVLAVDDSL+DRKVIERLLKIS CKVT DSG ALQYLGLDGE ++VGFN Sbjct: 20 SSNGSEELHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGTRALQYLGLDGEKSSVGFND 79 Query: 405 LKVNLIITDYWMPGMTGYELLKKIKESSAFKEIPVVIMSSEKVLPRINRCLEEGAEEFIV 584 LKVNLI+TDY MPGMTGYELLKKIKESSAF+EIPVVIMSSE +L RI+RCLEEGAEEFIV Sbjct: 80 LKVNLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILTRIDRCLEEGAEEFIV 139 Query: 585 KPVKLSDVKRLKHHIMRDEVEENEEKSSSQGTLKRKLDD 701 KPVKLSDVKRLK+ +MR E +E E++S LKRK+DD Sbjct: 140 KPVKLSDVKRLKNFVMRGEGDEKEKRS----ILKRKMDD 174 >gb|AFK41993.1| unknown [Lotus japonicus] Length = 209 Score = 215 bits (547), Expect = 2e-53 Identities = 111/155 (71%), Positives = 131/155 (84%), Gaps = 2/155 (1%) Frame = +3 Query: 207 TDGVFAGSDTETHELHVLAVDDSLIDRKVIERLLKISCCKVTVADSGRMALQYLGLDGET 386 T VF ++ ELHVLAVDDSL+DRKVIERLLKIS CKVTV DSG ALQYLGLDGE Sbjct: 6 TGEVFRRVLEDSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEE 65 Query: 387 N--VGFNALKVNLIITDYWMPGMTGYELLKKIKESSAFKEIPVVIMSSEKVLPRINRCLE 560 N +GF+ +KVNLI+TDY MPGMTGYELLKKIKESSAF+EIPVV+MSSE +L RI+RCLE Sbjct: 66 NSSIGFDGVKVNLIMTDYSMPGMTGYELLKKIKESSAFREIPVVVMSSENILTRIDRCLE 125 Query: 561 EGAEEFIVKPVKLSDVKRLKHHIMRDEVEENEEKS 665 EGAE+F++KPVKLSDV+RL+ IM EV++ E++S Sbjct: 126 EGAEDFLLKPVKLSDVRRLRDFIMSGEVKKGEKRS 160 >ref|XP_002322145.1| type-a arp3-like response regulator [Populus trichocarpa] gi|222869141|gb|EEF06272.1| type-a arp3-like response regulator [Populus trichocarpa] Length = 192 Score = 214 bits (545), Expect = 3e-53 Identities = 114/163 (69%), Positives = 135/163 (82%), Gaps = 3/163 (1%) Frame = +3 Query: 186 EIRTKMMTD--GVFAGSDTETHELHVLAVDDSLIDRKVIERLLKISCCKVTVADSGRMAL 359 EI + +T+ G GS + + ELHVLAVDDS +DRKVIERLLKIS CKVTV +SG AL Sbjct: 6 EILRRSLTEEVGFSKGSVSGSEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRAL 65 Query: 360 QYLGLDGE-TNVGFNALKVNLIITDYWMPGMTGYELLKKIKESSAFKEIPVVIMSSEKVL 536 QYLGLDGE ++VGFN LK+NLI+TDY MPGMTGYELLKKIKESSAF+EIPVVIMSSE +L Sbjct: 66 QYLGLDGEKSSVGFNDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENIL 125 Query: 537 PRINRCLEEGAEEFIVKPVKLSDVKRLKHHIMRDEVEENEEKS 665 RI+RCLEEGAEE+I+KPVKLSDVKR+K IM + E+ + +S Sbjct: 126 ARIDRCLEEGAEEYILKPVKLSDVKRIKDVIMGGDGEQKKRRS 168 >ref|XP_002322144.1| type-a response regulator [Populus trichocarpa] gi|222869140|gb|EEF06271.1| type-a response regulator [Populus trichocarpa] gi|309951242|emb|CBX43991.1| putative A-type response regulator 10 [Populus x canadensis] Length = 223 Score = 214 bits (545), Expect = 3e-53 Identities = 114/163 (69%), Positives = 135/163 (82%), Gaps = 3/163 (1%) Frame = +3 Query: 186 EIRTKMMTD--GVFAGSDTETHELHVLAVDDSLIDRKVIERLLKISCCKVTVADSGRMAL 359 EI + +T+ G GS + + ELHVLAVDDS +DRKVIERLLKIS CKVTV +SG AL Sbjct: 6 EILRRSLTEEVGFSKGSVSGSEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRAL 65 Query: 360 QYLGLDGE-TNVGFNALKVNLIITDYWMPGMTGYELLKKIKESSAFKEIPVVIMSSEKVL 536 QYLGLDGE ++VGFN LK+NLI+TDY MPGMTGYELLKKIKESSAF+EIPVVIMSSE +L Sbjct: 66 QYLGLDGEKSSVGFNDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENIL 125 Query: 537 PRINRCLEEGAEEFIVKPVKLSDVKRLKHHIMRDEVEENEEKS 665 RI+RCLEEGAEE+I+KPVKLSDVKR+K IM + E+ + +S Sbjct: 126 ARIDRCLEEGAEEYILKPVKLSDVKRIKDVIMGGDGEQKKRRS 168 >gb|AAQ10675.1| type-A response regulator [Catharanthus roseus] Length = 254 Score = 213 bits (542), Expect = 7e-53 Identities = 114/171 (66%), Positives = 132/171 (77%), Gaps = 11/171 (6%) Frame = +3 Query: 228 SDTETHELHVLAVDDSLIDRKVIERLLKISCCKVTVADSGRMALQYLGLDGE-TNVGFNA 404 S ELHVLAVDDSL+DRKVIERLLKISCCKVT +SGR ALQYLGLDGE + VGF+ Sbjct: 7 SSGSAKELHVLAVDDSLVDRKVIERLLKISCCKVTAVESGRRALQYLGLDGEKSTVGFDG 66 Query: 405 LKVNLIITDYWMPGMTGYELLKKIKESSAFKEIPVVIMSSEKVLPRINRCLEEGAEEFIV 584 LKVNLI+TDY MPGMTGYELLKKIK SS KEIPVVIMSSE +L RI+RCLEEGAEEF+V Sbjct: 67 LKVNLILTDYSMPGMTGYELLKKIKGSSTLKEIPVVIMSSENILTRIDRCLEEGAEEFLV 126 Query: 585 KPVKLSDVKRLKHHIMRDEVEENEEK----------SSSQGTLKRKLDDTN 707 KPVKLSDVKR+K +++ E+ E+K + + T KR LD ++ Sbjct: 127 KPVKLSDVKRIKDFVLKGGDEDGEKKTLGASKVGDENRPKETRKRNLDQSS 177