BLASTX nr result

ID: Coptis25_contig00002140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002140
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539105.1| PREDICTED: ethylene-responsive transcription...   266   5e-69
ref|XP_002530247.1| Protein AINTEGUMENTA, putative [Ricinus comm...   265   2e-68
ref|XP_002284749.2| PREDICTED: ethylene-responsive transcription...   263   6e-68
ref|XP_003606515.1| Transcription factor APETALA2 [Medicago trun...   257   3e-66
emb|CBI16240.3| unnamed protein product [Vitis vinifera]              256   4e-66

>ref|XP_003539105.1| PREDICTED: ethylene-responsive transcription factor RAP2-7-like
           [Glycine max]
          Length = 477

 Score =  266 bits (680), Expect = 5e-69
 Identities = 147/244 (60%), Positives = 159/244 (65%), Gaps = 10/244 (4%)
 Frame = +2

Query: 245 DDSCSTRNEDDNNVNGVMAIQFDILNXXXXXXSGFVTKELFPVMTCGT----------TT 394
           +DS STR  DD          FDIL       +GFVTKELFPVM+ G           T 
Sbjct: 57  EDSDSTRAADDVYTT----FNFDILKVEGA--NGFVTKELFPVMSEGAKGHATSSFSGTN 110

Query: 395 TGLDLSLPGSTVDLSFAGNXXXXXXXXXXXXXEIKPVVKKXXXXXXXXXXQYRGVTFYRR 574
             +DLS  G   + S                 + +   KK          QYRGVTFYRR
Sbjct: 111 GFVDLSFDGDGGNTSEMKMLQPQNQNQTQTRTQTQQPAKKSRRGPRSRSSQYRGVTFYRR 170

Query: 575 TGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVEADINFNLSDYEDDMKQMRN 754
           TGRWESHIWDCGKQVYLGGFDT            IKFRGV+ADINFNLSDYEDD+KQM+N
Sbjct: 171 TGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDLKQMQN 230

Query: 755 LTKEEFVHILRRHSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAA 934
           L+KEEFVHILRR STGF+RGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAA
Sbjct: 231 LSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAA 290

Query: 935 RAYD 946
           RAYD
Sbjct: 291 RAYD 294


>ref|XP_002530247.1| Protein AINTEGUMENTA, putative [Ricinus communis]
           gi|223530251|gb|EEF32153.1| Protein AINTEGUMENTA,
           putative [Ricinus communis]
          Length = 499

 Score =  265 bits (676), Expect = 2e-68
 Identities = 145/253 (57%), Positives = 160/253 (63%), Gaps = 17/253 (6%)
 Frame = +2

Query: 239 TGDDSCSTR----------NEDDNNVNGVMAIQFDIL---NXXXXXXSGFVTKELFPVMT 379
           + D+SCSTR            D NN N +    FDIL   N      +   TKELFPV  
Sbjct: 60  SNDESCSTRAYTGGDTISTTTDSNNKNKIYTFNFDILKVGNEENENGAVIGTKELFPVEN 119

Query: 380 CGTTTTGLDLSLPGSTVDLSFAGNXXXXXXXXXXXXXEI--KPV--VKKXXXXXXXXXXQ 547
                        G  +DLSF                 +  +P+  VKK          Q
Sbjct: 120 -------------GHGIDLSFERQQQQQEIIGVGGEVRVMQQPLQQVKKSRRGPRSRSSQ 166

Query: 548 YRGVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVEADINFNLSDY 727
           YRGVTFYRRTGRWESHIWDCGKQVYLGGFDT            IKFRG++ADINFNL DY
Sbjct: 167 YRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGIDADINFNLGDY 226

Query: 728 EDDMKQMRNLTKEEFVHILRRHSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLG 907
           ++D+KQM+NLTKEEFVHILRRHSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLG
Sbjct: 227 DEDLKQMKNLTKEEFVHILRRHSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLG 286

Query: 908 LFDSEVEAARAYD 946
           LFDSEVEAARAYD
Sbjct: 287 LFDSEVEAARAYD 299


>ref|XP_002284749.2| PREDICTED: ethylene-responsive transcription factor RAP2-7-like
           [Vitis vinifera]
          Length = 500

 Score =  263 bits (671), Expect = 6e-68
 Identities = 145/244 (59%), Positives = 162/244 (66%), Gaps = 10/244 (4%)
 Frame = +2

Query: 245 DDSCSTRNEDDNNVNGVMAIQFDILNXXXXXX-SGFVTKELFPVMTCGTTTTGLDLSLPG 421
           DDSCSTR  D  ++N      FDIL        +  VT++LFP M+ G    G  +   G
Sbjct: 57  DDSCSTRAGDAFSLN------FDILKVGDCGSPNDVVTRQLFP-MSAGGGVGGDSVFFQG 109

Query: 422 ST----VDLSF-----AGNXXXXXXXXXXXXXEIKPVVKKXXXXXXXXXXQYRGVTFYRR 574
            +    +DLSF      G              + +  VKK          QYRGVTFYRR
Sbjct: 110 QSSSNWIDLSFNQSGTVGGQEVRVAQQHPQPQQQQQPVKKSRRGPRSRSSQYRGVTFYRR 169

Query: 575 TGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVEADINFNLSDYEDDMKQMRN 754
           TGRWESHIWDCGKQVYLGGFDT            IKFRGV+ADINFNLSDY++D+KQM+N
Sbjct: 170 TGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYDEDLKQMKN 229

Query: 755 LTKEEFVHILRRHSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAA 934
           LTKEEFVHILRR STGF+RGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAA
Sbjct: 230 LTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAA 289

Query: 935 RAYD 946
           RAYD
Sbjct: 290 RAYD 293


>ref|XP_003606515.1| Transcription factor APETALA2 [Medicago truncatula]
           gi|355507570|gb|AES88712.1| Transcription factor
           APETALA2 [Medicago truncatula]
          Length = 469

 Score =  257 bits (656), Expect = 3e-66
 Identities = 137/234 (58%), Positives = 153/234 (65%)
 Frame = +2

Query: 245 DDSCSTRNEDDNNVNGVMAIQFDILNXXXXXXSGFVTKELFPVMTCGTTTTGLDLSLPGS 424
           +DSCSTR+           + FDIL       +  VTKE FPV    T+++    S+   
Sbjct: 50  EDSCSTRD---------FTLSFDILKTEGSNSNNVVTKEFFPVKLQATSSS---FSMKNG 97

Query: 425 TVDLSFAGNXXXXXXXXXXXXXEIKPVVKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWD 604
           +VD S   N             +    VKK          QYRGVTFYRRTGRWESHIWD
Sbjct: 98  SVDFSINQNEEMKIV-------QAPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWD 150

Query: 605 CGKQVYLGGFDTXXXXXXXXXXXXIKFRGVEADINFNLSDYEDDMKQMRNLTKEEFVHIL 784
           CGKQVYLGGFDT            IKFRGV ADINFNL+DY+DD+KQ +NL+KEEFV IL
Sbjct: 151 CGKQVYLGGFDTAHAAARAYDRAAIKFRGVGADINFNLNDYDDDLKQTKNLSKEEFVQIL 210

Query: 785 RRHSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYD 946
           RR S GF+RGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYD
Sbjct: 211 RRQSNGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYD 264


>emb|CBI16240.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  256 bits (655), Expect = 4e-66
 Identities = 140/235 (59%), Positives = 155/235 (65%), Gaps = 1/235 (0%)
 Frame = +2

Query: 245 DDSCSTRNEDDNNVNGVMAIQFDILNXXXXXX-SGFVTKELFPVMTCGTTTTGLDLSLPG 421
           DDSCSTR  D  ++N      FDIL        +  VT++LFP M+ G    G  +   G
Sbjct: 57  DDSCSTRAGDAFSLN------FDILKVGDCGSPNDVVTRQLFP-MSAGGGVGGDSVFFQG 109

Query: 422 STVDLSFAGNXXXXXXXXXXXXXEIKPVVKKXXXXXXXXXXQYRGVTFYRRTGRWESHIW 601
                                  + +  VKK          QYRGVTFYRRTGRWESHIW
Sbjct: 110 QVAQ-------------QHPQPQQQQQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIW 156

Query: 602 DCGKQVYLGGFDTXXXXXXXXXXXXIKFRGVEADINFNLSDYEDDMKQMRNLTKEEFVHI 781
           DCGKQVYLGGFDT            IKFRGV+ADINFNLSDY++D+KQM+NLTKEEFVHI
Sbjct: 157 DCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYDEDLKQMKNLTKEEFVHI 216

Query: 782 LRRHSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYD 946
           LRR STGF+RGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYD
Sbjct: 217 LRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYD 271


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