BLASTX nr result

ID: Coptis25_contig00002137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002137
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513137.1| conserved hypothetical protein [Ricinus comm...    91   6e-26
ref|XP_002268460.1| PREDICTED: uncharacterized protein LOC100252...    92   4e-25
ref|XP_002268202.1| PREDICTED: uncharacterized protein LOC100257...    92   5e-25
ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-24
ref|NP_001239662.1| uncharacterized protein LOC100806152 [Glycin...    95   3e-24

>ref|XP_002513137.1| conserved hypothetical protein [Ricinus communis]
           gi|223548148|gb|EEF49640.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 424

 Score = 90.5 bits (223), Expect(2) = 6e-26
 Identities = 38/47 (80%), Positives = 44/47 (93%)
 Frame = -3

Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233
           TMADFSDQLF FQD+LFDN +GRL+FSGNN ++LWPGDGKPGLW+NS
Sbjct: 207 TMADFSDQLFSFQDLLFDNSDGRLEFSGNNLASLWPGDGKPGLWINS 253



 Score = 52.0 bits (123), Expect(2) = 6e-26
 Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = -1

Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGG-ESSDDRDEETELVIPPVF 1
           PGLW+NSISRMGA+Y                AGG E  ++RDE+ ELV+PPVF
Sbjct: 247 PGLWINSISRMGAIYTLIRREEEIFVEERIRAGGIEVDEERDEDIELVVPPVF 299


>ref|XP_002268460.1| PREDICTED: uncharacterized protein LOC100252690 [Vitis vinifera]
          Length = 426

 Score = 92.0 bits (227), Expect(2) = 4e-25
 Identities = 39/47 (82%), Positives = 43/47 (91%)
 Frame = -3

Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233
           TMADFSDQ +GFQD LFDN NGRL+FSGN+Y ALWPGDGKPGLW+NS
Sbjct: 209 TMADFSDQHYGFQDALFDNSNGRLEFSGNSYGALWPGDGKPGLWLNS 255



 Score = 47.8 bits (112), Expect(2) = 4e-25
 Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGGES-SDDRDEETELVIPPV 4
           PGLW+NSISRMGA+Y                 GG+     RDEE ELVIPPV
Sbjct: 249 PGLWLNSISRMGAVYSLLVREEEIFIEERKRVGGDQVVKGRDEELELVIPPV 300


>ref|XP_002268202.1| PREDICTED: uncharacterized protein LOC100257837 [Vitis vinifera]
          Length = 426

 Score = 91.7 bits (226), Expect(2) = 5e-25
 Identities = 38/47 (80%), Positives = 44/47 (93%)
 Frame = -3

Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233
           TMADFSDQL+GFQD LFDN NG+L+FSGN++ ALWPGDGKPGLW+NS
Sbjct: 209 TMADFSDQLYGFQDALFDNSNGQLEFSGNSFGALWPGDGKPGLWLNS 255



 Score = 47.8 bits (112), Expect(2) = 5e-25
 Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGGES-SDDRDEETELVIPPV 4
           PGLW+NSISRMGA+Y                 GG+     RDEE ELVIPPV
Sbjct: 249 PGLWLNSISRMGAVYSLLVREEEIFIEERKRVGGDQVVKGRDEELELVIPPV 300


>ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|222853263|gb|EEE90810.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score = 90.1 bits (222), Expect(2) = 2e-24
 Identities = 38/47 (80%), Positives = 44/47 (93%)
 Frame = -3

Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233
           TMADFSDQLFGFQD+LF+N +GRL+F GNN+ ALWPGDGKPGLW+NS
Sbjct: 213 TMADFSDQLFGFQDLLFENFDGRLEFLGNNFGALWPGDGKPGLWINS 259



 Score = 47.0 bits (110), Expect(2) = 2e-24
 Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -1

Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGG-ESSDDRDEETELVIPPVF 1
           PGLW+NSISRMGA+Y                AGG E   +RDE+ ELV+ PVF
Sbjct: 253 PGLWINSISRMGAIYSLIVREEEIFIEERKRAGGFEVDRERDEDIELVLAPVF 305


>ref|NP_001239662.1| uncharacterized protein LOC100806152 [Glycine max]
           gi|255646517|gb|ACU23736.1| unknown [Glycine max]
          Length = 429

 Score = 95.1 bits (235), Expect(2) = 3e-24
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -3

Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233
           TMADF DQLFGFQD+LFDN NGRL+FSGNN+ ALWPGDGKPGLW+NS
Sbjct: 214 TMADFCDQLFGFQDLLFDNANGRLEFSGNNFGALWPGDGKPGLWLNS 260



 Score = 41.6 bits (96), Expect(2) = 3e-24
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = -1

Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGGES---SDDRDEETELVIPPVF 1
           PGLW+NSISRMGA+Y                  G +     +R+E+ ELV+PPVF
Sbjct: 254 PGLWLNSISRMGAVYTLIAREEEIFIQERKRKVGVAVVPDLERNEDIELVLPPVF 308


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