BLASTX nr result
ID: Coptis25_contig00002137
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002137 (375 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513137.1| conserved hypothetical protein [Ricinus comm... 91 6e-26 ref|XP_002268460.1| PREDICTED: uncharacterized protein LOC100252... 92 4e-25 ref|XP_002268202.1| PREDICTED: uncharacterized protein LOC100257... 92 5e-25 ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|2... 90 2e-24 ref|NP_001239662.1| uncharacterized protein LOC100806152 [Glycin... 95 3e-24 >ref|XP_002513137.1| conserved hypothetical protein [Ricinus communis] gi|223548148|gb|EEF49640.1| conserved hypothetical protein [Ricinus communis] Length = 424 Score = 90.5 bits (223), Expect(2) = 6e-26 Identities = 38/47 (80%), Positives = 44/47 (93%) Frame = -3 Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233 TMADFSDQLF FQD+LFDN +GRL+FSGNN ++LWPGDGKPGLW+NS Sbjct: 207 TMADFSDQLFSFQDLLFDNSDGRLEFSGNNLASLWPGDGKPGLWINS 253 Score = 52.0 bits (123), Expect(2) = 6e-26 Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Frame = -1 Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGG-ESSDDRDEETELVIPPVF 1 PGLW+NSISRMGA+Y AGG E ++RDE+ ELV+PPVF Sbjct: 247 PGLWINSISRMGAIYTLIRREEEIFVEERIRAGGIEVDEERDEDIELVVPPVF 299 >ref|XP_002268460.1| PREDICTED: uncharacterized protein LOC100252690 [Vitis vinifera] Length = 426 Score = 92.0 bits (227), Expect(2) = 4e-25 Identities = 39/47 (82%), Positives = 43/47 (91%) Frame = -3 Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233 TMADFSDQ +GFQD LFDN NGRL+FSGN+Y ALWPGDGKPGLW+NS Sbjct: 209 TMADFSDQHYGFQDALFDNSNGRLEFSGNSYGALWPGDGKPGLWLNS 255 Score = 47.8 bits (112), Expect(2) = 4e-25 Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -1 Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGGES-SDDRDEETELVIPPV 4 PGLW+NSISRMGA+Y GG+ RDEE ELVIPPV Sbjct: 249 PGLWLNSISRMGAVYSLLVREEEIFIEERKRVGGDQVVKGRDEELELVIPPV 300 >ref|XP_002268202.1| PREDICTED: uncharacterized protein LOC100257837 [Vitis vinifera] Length = 426 Score = 91.7 bits (226), Expect(2) = 5e-25 Identities = 38/47 (80%), Positives = 44/47 (93%) Frame = -3 Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233 TMADFSDQL+GFQD LFDN NG+L+FSGN++ ALWPGDGKPGLW+NS Sbjct: 209 TMADFSDQLYGFQDALFDNSNGQLEFSGNSFGALWPGDGKPGLWLNS 255 Score = 47.8 bits (112), Expect(2) = 5e-25 Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -1 Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGGES-SDDRDEETELVIPPV 4 PGLW+NSISRMGA+Y GG+ RDEE ELVIPPV Sbjct: 249 PGLWLNSISRMGAVYSLLVREEEIFIEERKRVGGDQVVKGRDEELELVIPPV 300 >ref|XP_002310360.1| predicted protein [Populus trichocarpa] gi|222853263|gb|EEE90810.1| predicted protein [Populus trichocarpa] Length = 430 Score = 90.1 bits (222), Expect(2) = 2e-24 Identities = 38/47 (80%), Positives = 44/47 (93%) Frame = -3 Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233 TMADFSDQLFGFQD+LF+N +GRL+F GNN+ ALWPGDGKPGLW+NS Sbjct: 213 TMADFSDQLFGFQDLLFENFDGRLEFLGNNFGALWPGDGKPGLWINS 259 Score = 47.0 bits (110), Expect(2) = 2e-24 Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = -1 Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGG-ESSDDRDEETELVIPPVF 1 PGLW+NSISRMGA+Y AGG E +RDE+ ELV+ PVF Sbjct: 253 PGLWINSISRMGAIYSLIVREEEIFIEERKRAGGFEVDRERDEDIELVLAPVF 305 >ref|NP_001239662.1| uncharacterized protein LOC100806152 [Glycine max] gi|255646517|gb|ACU23736.1| unknown [Glycine max] Length = 429 Score = 95.1 bits (235), Expect(2) = 3e-24 Identities = 40/47 (85%), Positives = 44/47 (93%) Frame = -3 Query: 373 TMADFSDQLFGFQDILFDNENGRLQFSGNNYSALWPGDGKPGLWMNS 233 TMADF DQLFGFQD+LFDN NGRL+FSGNN+ ALWPGDGKPGLW+NS Sbjct: 214 TMADFCDQLFGFQDLLFDNANGRLEFSGNNFGALWPGDGKPGLWLNS 260 Score = 41.6 bits (96), Expect(2) = 3e-24 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Frame = -1 Query: 156 PGLWMNSISRMGALYXXXXXXXXXXXXXXXXAGGES---SDDRDEETELVIPPVF 1 PGLW+NSISRMGA+Y G + +R+E+ ELV+PPVF Sbjct: 254 PGLWLNSISRMGAVYTLIAREEEIFIQERKRKVGVAVVPDLERNEDIELVLPPVF 308