BLASTX nr result

ID: Coptis25_contig00002112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002112
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT84460.1| cytochrome b5 isoform Cb5-C [Vernicia fordii]          182   5e-44
emb|CAA50575.1| cytochrome b5 [Nicotiana tabacum]                     180   3e-43
ref|XP_002521096.1| cytochrome B5 isoform 1, putative [Ricinus c...   180   3e-43
ref|XP_004133998.1| PREDICTED: cytochrome b5 isoform B-like [Cuc...   179   6e-43
sp|P49098.1|CYB5_TOBAC RecName: Full=Cytochrome b5                    179   6e-43

>gb|AAT84460.1| cytochrome b5 isoform Cb5-C [Vernicia fordii]
          Length = 136

 Score =  182 bits (463), Expect = 5e-44
 Identities = 94/150 (62%), Positives = 102/150 (68%)
 Frame = +2

Query: 80  MGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLSXXXXXXXXXXX 259
           MGS GKVFTLAEVSEH+N KDCWLVI+GKVYDVTKFLEDHPGGDEVLLS           
Sbjct: 1   MGSSGKVFTLAEVSEHNNPKDCWLVIEGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFE 60

Query: 260 XXXXXXXXXXXXXXXXXXXXXXXXXRAMMDEYYVGDFDTSTIPSTHTYTPPKQPHYNQDK 439
                                    RAMMDE+YVG+ D+STIPS   YTPPKQPHYNQDK
Sbjct: 61  DVGHSSSA-----------------RAMMDEFYVGEIDSSTIPSRMAYTPPKQPHYNQDK 103

Query: 440 TSEFLIKLLQFFVPLAILGLAFAVRFYTKA 529
           T EF+IK LQF VPL ILGLA  +RFYTK+
Sbjct: 104 TMEFIIKFLQFVVPLLILGLAVGIRFYTKS 133


>emb|CAA50575.1| cytochrome b5 [Nicotiana tabacum]
          Length = 139

 Score =  180 bits (457), Expect = 3e-43
 Identities = 90/150 (60%), Positives = 103/150 (68%)
 Frame = +2

Query: 77  VMGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLSXXXXXXXXXX 256
           +MG E KVFTLAEVS+H+N+KDCWLVI GKVYDVTKFL+DHPGGDEVLLS          
Sbjct: 3   IMGGETKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDF 62

Query: 257 XXXXXXXXXXXXXXXXXXXXXXXXXXRAMMDEYYVGDFDTSTIPSTHTYTPPKQPHYNQD 436
                                     RAM+DEYYVGD D++TIP+   YTPP QPHYNQD
Sbjct: 63  EDVGHSSSA-----------------RAMLDEYYVGDIDSATIPTKTKYTPPNQPHYNQD 105

Query: 437 KTSEFLIKLLQFFVPLAILGLAFAVRFYTK 526
           KTSEF++KLLQF VPL ILG+AF +RFYTK
Sbjct: 106 KTSEFVVKLLQFLVPLIILGVAFGIRFYTK 135


>ref|XP_002521096.1| cytochrome B5 isoform 1, putative [Ricinus communis]
           gi|223539665|gb|EEF41247.1| cytochrome B5 isoform 1,
           putative [Ricinus communis]
          Length = 136

 Score =  180 bits (456), Expect = 3e-43
 Identities = 91/150 (60%), Positives = 103/150 (68%)
 Frame = +2

Query: 80  MGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLSXXXXXXXXXXX 259
           MG +GKV+TLA+VSEH++ KDCWLVI+GKVYDVTKFLEDHPGGDEVLLS           
Sbjct: 1   MGGQGKVYTLADVSEHNSPKDCWLVIEGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFE 60

Query: 260 XXXXXXXXXXXXXXXXXXXXXXXXXRAMMDEYYVGDFDTSTIPSTHTYTPPKQPHYNQDK 439
                                    RAMMDE+YVG+ DTSTIP+   YTPPKQPHYNQDK
Sbjct: 61  DVGHSSSA-----------------RAMMDEFYVGEIDTSTIPTKKAYTPPKQPHYNQDK 103

Query: 440 TSEFLIKLLQFFVPLAILGLAFAVRFYTKA 529
           T EF+IKLLQF VPL ILGLA  +RFYTK+
Sbjct: 104 TPEFIIKLLQFVVPLLILGLAVGIRFYTKS 133


>ref|XP_004133998.1| PREDICTED: cytochrome b5 isoform B-like [Cucumis sativus]
           gi|449526187|ref|XP_004170095.1| PREDICTED: cytochrome
           b5 isoform B-like [Cucumis sativus]
          Length = 201

 Score =  179 bits (454), Expect = 6e-43
 Identities = 93/153 (60%), Positives = 102/153 (66%)
 Frame = +2

Query: 68  QEQVMGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLSXXXXXXX 247
           Q  VMGS  KVFTL EV+EH+N KDCWL+I GKVYDVTKFLEDHPGGD+VLLS       
Sbjct: 64  QFHVMGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDAT 123

Query: 248 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAMMDEYYVGDFDTSTIPSTHTYTPPKQPHY 427
                                        R MMD+YYVG+ D+STIP    YTPPKQPHY
Sbjct: 124 DDFEDVGHSDNA-----------------REMMDQYYVGEIDSSTIPKKVAYTPPKQPHY 166

Query: 428 NQDKTSEFLIKLLQFFVPLAILGLAFAVRFYTK 526
           NQDKTSEF+IKLLQF VPLAILGLA A+RFYTK
Sbjct: 167 NQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTK 199


>sp|P49098.1|CYB5_TOBAC RecName: Full=Cytochrome b5
          Length = 136

 Score =  179 bits (454), Expect = 6e-43
 Identities = 90/149 (60%), Positives = 102/149 (68%)
 Frame = +2

Query: 80  MGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLSXXXXXXXXXXX 259
           MG E KVFTLAEVS+H+N+KDCWLVI GKVYDVTKFL+DHPGGDEVLLS           
Sbjct: 1   MGGETKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFE 60

Query: 260 XXXXXXXXXXXXXXXXXXXXXXXXXRAMMDEYYVGDFDTSTIPSTHTYTPPKQPHYNQDK 439
                                    RAM+DEYYVGD D++TIP+   YTPP QPHYNQDK
Sbjct: 61  DVGHSSSA-----------------RAMLDEYYVGDIDSATIPTKTKYTPPNQPHYNQDK 103

Query: 440 TSEFLIKLLQFFVPLAILGLAFAVRFYTK 526
           TSEF++KLLQF VPL ILG+AF +RFYTK
Sbjct: 104 TSEFVVKLLQFLVPLIILGVAFGIRFYTK 132


Top