BLASTX nr result

ID: Coptis25_contig00002111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002111
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX07777.1| calmodulin-binding transcription factor SR4 [Sola...    44   2e-09
ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription ...    46   3e-09
ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|2...    42   2e-07
ref|XP_004157104.1| PREDICTED: calmodulin-binding transcription ...    45   2e-07
ref|XP_002519300.1| calmodulin-binding transcription activator (...    40   3e-07

>gb|AEX07777.1| calmodulin-binding transcription factor SR4 [Solanum lycopersicum]
          Length = 939

 Score = 44.3 bits (103), Expect(2) = 2e-09
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = -1

Query: 218 GSSWI*MGTGQMIAAGVTPSFRDGHERTSLHWATYYGR 105
           G  W   G   +IAAG++P+FRD   RT+LHWA +YGR
Sbjct: 594 GYEW---GLLPLIAAGISPNFRDACGRTALHWAAHYGR 628



 Score = 42.4 bits (98), Expect(2) = 2e-09
 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
 Frame = -2

Query: 298 KLYEWFAFIV----EGPCILKDEGQRLIHLAAALGFEW 197
           KLYEW         +GP IL D+G+ +IHL AALG+EW
Sbjct: 560 KLYEWLVSRAHEEDKGPNILNDQGKGVIHLVAALGYEW 597


>ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription activator 1 [Vitis
           vinifera] gi|297736797|emb|CBI25998.3| unnamed protein
           product [Vitis vinifera]
          Length = 1018

 Score = 45.8 bits (107), Expect(2) = 3e-09
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -1

Query: 191 GQMIAAGVTPSFRDGHERTSLHWATYYGR 105
           G +I AGV+P+FRD   RT LHWA+Y+GR
Sbjct: 667 GPIIVAGVSPNFRDARGRTGLHWASYFGR 695



 Score = 40.4 bits (93), Expect(2) = 3e-09
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = -2

Query: 307 LSMKLYEWFAFIVE----GPCILKDEGQRLIHLAAALGFEW 197
           L  +L+EW    V     GP +L  +GQ +IHLAAALG+EW
Sbjct: 624 LKDRLFEWLVCKVHEGVRGPHVLDGKGQGVIHLAAALGYEW 664


>ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|222865111|gb|EEF02242.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score = 42.4 bits (98), Expect(2) = 2e-07
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = -1

Query: 185 MIAAGVTPSFRDGHERTSLHWATYYGR 105
           ++AAG  P+FRD   RT+LHWA+Y+GR
Sbjct: 611 IVAAGGNPNFRDARGRTALHWASYFGR 637



 Score = 37.7 bits (86), Expect(2) = 2e-07
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
 Frame = -2

Query: 316 LHSLSM-KLYEWFAFIV----EGPCILKDEGQRLIHLAAALGFEW 197
           + SL M +L EW A  V    +G  +L  EGQ +IHLAA+LG+EW
Sbjct: 562 IQSLLMDRLCEWLACKVHEGDKGSDVLDGEGQGVIHLAASLGYEW 606


>ref|XP_004157104.1| PREDICTED: calmodulin-binding transcription activator 2-like
           [Cucumis sativus]
          Length = 989

 Score = 45.4 bits (106), Expect(2) = 2e-07
 Identities = 17/29 (58%), Positives = 26/29 (89%)
 Frame = -1

Query: 191 GQMIAAGVTPSFRDGHERTSLHWATYYGR 105
           G +IA+G++P+FRD + RT+LHWA+Y+GR
Sbjct: 640 GLIIASGLSPNFRDSNGRTALHWASYFGR 668



 Score = 34.3 bits (77), Expect(2) = 2e-07
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
 Frame = -2

Query: 307 LSMKLYEWFAFIVE----GPCILKDEGQRLIHLAAALGF 203
           L  KL +W A+ V     G  +L DEG  +IHLAAALG+
Sbjct: 597 LEDKLCKWLAYKVHDGTMGTHVLDDEGLGIIHLAAALGY 635


>ref|XP_002519300.1| calmodulin-binding transcription activator (camta), plants,
           putative [Ricinus communis] gi|223541615|gb|EEF43164.1|
           calmodulin-binding transcription activator (camta),
           plants, putative [Ricinus communis]
          Length = 999

 Score = 40.0 bits (92), Expect(2) = 3e-07
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = -1

Query: 191 GQMIAAGVTPSFRDGHERTSLHWATYYGR 105
           G ++A    P+FRD   RT+LHWA+Y+GR
Sbjct: 659 GLIVAVSNNPNFRDAQGRTALHWASYFGR 687



 Score = 39.3 bits (90), Expect(2) = 3e-07
 Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
 Frame = -2

Query: 316 LHSLSM-KLYEWFAFIV---EGPCILKDEGQRLIHLAAALGFEW 197
           +HSL   KL EW    V   +G  +L DEGQ ++HLAA+LG+EW
Sbjct: 613 IHSLLKDKLCEWLVCKVHEGKGLDVLDDEGQGVMHLAASLGYEW 656


Top