BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002109
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24753.3| unnamed protein product [Vitis vinifera]              227   3e-57
ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ...   227   3e-57
ref|XP_002529107.1| conserved hypothetical protein [Ricinus comm...   219   9e-55
dbj|BAB08928.1| unnamed protein product [Arabidopsis thaliana]        218   1e-54
ref|NP_197833.2| Transcription factor IIIC, subunit 5 [Arabidops...   218   1e-54

>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  227 bits (579), Expect = 3e-57
 Identities = 116/202 (57%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
 Frame = -3

Query: 905 LLDKGLRVGAHMFKRLLFRTAYYFSTGPYRQLWIRKGYDPRKDPESRIYQRIDFRVPPPL 726
           LLDKGL VG +  +RLLFRTAYYFS GP+ + WIRKGYDPRK+P+S IYQRIDFRVPP L
Sbjct: 306 LLDKGLNVGDYTLRRLLFRTAYYFSNGPFLRFWIRKGYDPRKNPDSCIYQRIDFRVPPSL 365

Query: 725 RHIGDVHATDKLKHMWKDLCALRVFPCKCQISLQLFELDDDYIREEIRKP-PEDTCSCST 549
           R   D +A + LK  W+D+C+ RVFP KC  SLQLFEL DDYI++EIRKP  + TC+ +T
Sbjct: 366 RSYCDANAANGLKQRWEDICSFRVFPYKCHTSLQLFELADDYIQQEIRKPLKQTTCTGAT 425

Query: 548 GWFSSFVHDSLKLRIAVRFLSVYPKMGAESLLKSASLRFEKSKRARALKSDFRPKEME-H 372
           GWFS  V +SL+L + VRFLS+ P+  AE LLKSAS RFEKSKR    +++ RP E    
Sbjct: 426 GWFSYRVLESLRLCVMVRFLSICPETSAEYLLKSASDRFEKSKRMHIYENNLRPNEEGIQ 485

Query: 371 QLNKESSSHLSKVSPTKLKDTD 306
           ++NKE      K  P  + D +
Sbjct: 486 EVNKELEGDKDKEEPNDVDDDE 507


>ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis
           vinifera]
          Length = 568

 Score =  227 bits (579), Expect = 3e-57
 Identities = 116/202 (57%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
 Frame = -3

Query: 905 LLDKGLRVGAHMFKRLLFRTAYYFSTGPYRQLWIRKGYDPRKDPESRIYQRIDFRVPPPL 726
           LLDKGL VG +  +RLLFRTAYYFS GP+ + WIRKGYDPRK+P+S IYQRIDFRVPP L
Sbjct: 269 LLDKGLNVGDYTLRRLLFRTAYYFSNGPFLRFWIRKGYDPRKNPDSCIYQRIDFRVPPSL 328

Query: 725 RHIGDVHATDKLKHMWKDLCALRVFPCKCQISLQLFELDDDYIREEIRKP-PEDTCSCST 549
           R   D +A + LK  W+D+C+ RVFP KC  SLQLFEL DDYI++EIRKP  + TC+ +T
Sbjct: 329 RSYCDANAANGLKQRWEDICSFRVFPYKCHTSLQLFELADDYIQQEIRKPLKQTTCTGAT 388

Query: 548 GWFSSFVHDSLKLRIAVRFLSVYPKMGAESLLKSASLRFEKSKRARALKSDFRPKEME-H 372
           GWFS  V +SL+L + VRFLS+ P+  AE LLKSAS RFEKSKR    +++ RP E    
Sbjct: 389 GWFSYRVLESLRLCVMVRFLSICPETSAEYLLKSASDRFEKSKRMHIYENNLRPNEEGIQ 448

Query: 371 QLNKESSSHLSKVSPTKLKDTD 306
           ++NKE      K  P  + D +
Sbjct: 449 EVNKELEGDKDKEEPNDVDDDE 470


>ref|XP_002529107.1| conserved hypothetical protein [Ricinus communis]
           gi|223531458|gb|EEF33291.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 540

 Score =  219 bits (557), Expect = 9e-55
 Identities = 111/184 (60%), Positives = 131/184 (71%), Gaps = 2/184 (1%)
 Frame = -3

Query: 905 LLDKGLRVGAHMFKRLLFRTAYYFSTGPYRQLWIRKGYDPRKDPESRIYQRIDFRVPPPL 726
           LL K L+      +RLL   AYYFS GP+ + WIRKGYDPRKDP+SRIYQRIDFRVPPPL
Sbjct: 247 LLVKNLKFTHQTLRRLLLAVAYYFSGGPFLRFWIRKGYDPRKDPDSRIYQRIDFRVPPPL 306

Query: 725 RHIGDVHATDKLKHMWKDLCALRVFPCKCQISLQLFELDDDYIREEIRKPP-EDTCSCST 549
           R   D +A   LKH W+DLC  +VFP K Q SLQL ELDDDYI++EI+KPP + TC+  T
Sbjct: 307 RSFSDANAAKGLKHKWEDLCKFQVFPYKFQTSLQLCELDDDYIQQEIKKPPKQTTCTYGT 366

Query: 548 GWFSSFVHDSLKLRIAVRFLSVYPKMGAESLLKSASLRFEKSKRARALKSDFRPKEMEHQ 369
           GWF   VHDS + R+ VRFLSVYPK GA  LLK+AS  FEKSKRA   K   +  ++E Q
Sbjct: 367 GWFLQQVHDSFRHRVMVRFLSVYPKSGAAKLLKAASEDFEKSKRACIYKEVLKSDQVERQ 426

Query: 368 -LNK 360
            +NK
Sbjct: 427 KINK 430


>dbj|BAB08928.1| unnamed protein product [Arabidopsis thaliana]
          Length = 552

 Score =  218 bits (556), Expect = 1e-54
 Identities = 108/206 (52%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
 Frame = -3

Query: 905 LLDKGLRVGAHMFKRLLFRTAYYFSTGPYRQLWIRKGYDPRKDPESRIYQRIDFRVPPPL 726
           LLDKGL    HM  R L R AYYFS GP+ + WI++GYDPRKDPESR++QR++FRVPP L
Sbjct: 260 LLDKGLTCTHHMLNRFLLRAAYYFSGGPFLRFWIKRGYDPRKDPESRVFQRMEFRVPPEL 319

Query: 725 RHIGDVHATDKLKHMWKDLCALRVFPCKCQISLQLFELDDDYIREEIRKPP-EDTCSCST 549
           +   D +AT+K K  W D+CA +VFP KCQ  LQLFELDD+YI++EIRKPP + TC+  T
Sbjct: 320 KGYCDSNATNKSKPSWDDICAFKVFPFKCQTFLQLFELDDEYIQQEIRKPPKQTTCNYKT 379

Query: 548 GWFSSFVHDSLKLRIAVRFLSVYPKMGAESLLKSASLRFEKSKRARALKSDFRPKEMEHQ 369
           GWFS  + D+L+LR+AVRF+SV+P+ G E + KS    FE+S++ R  K   +P +  HQ
Sbjct: 380 GWFSEALLDNLRLRVAVRFVSVFPEPGFEDVFKSIQEEFERSEKTRIQKDALQPSQRNHQ 439

Query: 368 LNKESSSHLSKVSPT-KLKDTDLVFD 294
              E++  + K   T K KD D+  D
Sbjct: 440 ---ETTKDMKKCKNTNKEKDDDVNAD 462


>ref|NP_197833.2| Transcription factor IIIC, subunit 5 [Arabidopsis thaliana]
           gi|332005929|gb|AED93312.1| Transcription factor IIIC,
           subunit 5 [Arabidopsis thaliana]
          Length = 554

 Score =  218 bits (556), Expect = 1e-54
 Identities = 108/206 (52%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
 Frame = -3

Query: 905 LLDKGLRVGAHMFKRLLFRTAYYFSTGPYRQLWIRKGYDPRKDPESRIYQRIDFRVPPPL 726
           LLDKGL    HM  R L R AYYFS GP+ + WI++GYDPRKDPESR++QR++FRVPP L
Sbjct: 269 LLDKGLTCTHHMLNRFLLRAAYYFSGGPFLRFWIKRGYDPRKDPESRVFQRMEFRVPPEL 328

Query: 725 RHIGDVHATDKLKHMWKDLCALRVFPCKCQISLQLFELDDDYIREEIRKPP-EDTCSCST 549
           +   D +AT+K K  W D+CA +VFP KCQ  LQLFELDD+YI++EIRKPP + TC+  T
Sbjct: 329 KGYCDSNATNKSKPSWDDICAFKVFPFKCQTFLQLFELDDEYIQQEIRKPPKQTTCNYKT 388

Query: 548 GWFSSFVHDSLKLRIAVRFLSVYPKMGAESLLKSASLRFEKSKRARALKSDFRPKEMEHQ 369
           GWFS  + D+L+LR+AVRF+SV+P+ G E + KS    FE+S++ R  K   +P +  HQ
Sbjct: 389 GWFSEALLDNLRLRVAVRFVSVFPEPGFEDVFKSIQEEFERSEKTRIQKDALQPSQRNHQ 448

Query: 368 LNKESSSHLSKVSPT-KLKDTDLVFD 294
              E++  + K   T K KD D+  D
Sbjct: 449 ---ETTKDMKKCKNTNKEKDDDVNAD 471