BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002108
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24753.3| unnamed protein product [Vitis vinifera]               73   4e-12
ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ...    72   6e-11
emb|CAN60475.1| hypothetical protein VITISV_028415 [Vitis vinifera]    72   6e-11
gb|AAG52180.1|AC012329_7 hypothetical protein; 45807-49650 [Arab...    69   3e-10
ref|NP_190510.3| Transcription factor IIIC, subunit 5 [Arabidops...    69   3e-10

>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score = 73.2 bits (178), Expect(2) = 4e-12
 Identities = 32/49 (65%), Positives = 38/49 (77%)
 Frame = +2

Query: 77  IIPRKINWEDHITRGSDHWEWQKAVSVLFDERPIWHTISLNHCLLDKGL 223
           IIP+K+NWE +I +GS+ WEWQ AVS LFDERPIW   +L   LLDKGL
Sbjct: 263 IIPKKVNWEQYIPKGSEQWEWQMAVSNLFDERPIWPKGALTERLLDKGL 311



 Score = 22.7 bits (47), Expect(2) = 4e-12
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 3   AIDYNIEDILLLVTIFHLVST 65
           AID+ I+DIL++  ++ +  T
Sbjct: 218 AIDFEIKDILIIYCLYRMCIT 238


>ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis
           vinifera]
          Length = 568

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = +2

Query: 80  IPRKINWEDHITRGSDHWEWQKAVSVLFDERPIWHTISLNHCLLDKGL 223
           IP+K+NWE +I +GS+ WEWQ AVS LFDERPIW   +L   LLDKGL
Sbjct: 227 IPKKVNWEQYIPKGSEQWEWQMAVSNLFDERPIWPKGALTERLLDKGL 274


>emb|CAN60475.1| hypothetical protein VITISV_028415 [Vitis vinifera]
          Length = 1110

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = +2

Query: 80  IPRKINWEDHITRGSDHWEWQKAVSVLFDERPIWHTISLNHCLLDKGL 223
           IP+K+NWE +I +GS+ WEWQ AVS LFDERPIW   +L   LLDKGL
Sbjct: 696 IPKKVNWEQYIPKGSEQWEWQMAVSNLFDERPIWPKGALTERLLDKGL 743


>gb|AAG52180.1|AC012329_7 hypothetical protein; 45807-49650 [Arabidopsis thaliana]
          Length = 595

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 80  IPRKINWEDHITRGSDHWEWQKAVSVLFDERPIWHTISLNHCLLDKGL 223
           IP+K+ WED ++R S+HW+WQ AVS LF+ERPIW   S+   LLDKGL
Sbjct: 214 IPKKLKWEDFVSRSSNHWQWQVAVSALFEERPIWTRDSVVQRLLDKGL 261


>ref|NP_190510.3| Transcription factor IIIC, subunit 5 [Arabidopsis thaliana]
           gi|332645018|gb|AEE78539.1| Transcription factor IIIC,
           subunit 5 [Arabidopsis thaliana]
          Length = 574

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 80  IPRKINWEDHITRGSDHWEWQKAVSVLFDERPIWHTISLNHCLLDKGL 223
           IP+K+ WED ++R S+HW+WQ AVS LF+ERPIW   S+   LLDKGL
Sbjct: 225 IPKKLKWEDFVSRSSNHWQWQVAVSALFEERPIWTRDSVVQRLLDKGL 272