BLASTX nr result

ID: Coptis25_contig00002107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002107
         (2003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27189.3| unnamed protein product [Vitis vinifera]              486   0.0  
emb|CAN60953.1| hypothetical protein VITISV_008875 [Vitis vinifera]   486   0.0  
ref|XP_003555881.1| PREDICTED: coatomer subunit delta-2-like [Gl...   470   0.0  
ref|XP_002526581.1| coatomer delta subunit, putative [Ricinus co...   468   0.0  
ref|XP_003536700.1| PREDICTED: coatomer subunit delta-2-like [Gl...   461   0.0  

>emb|CBI27189.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  486 bits (1252), Expect(3) = 0.0
 Identities = 250/355 (70%), Positives = 281/355 (79%), Gaps = 3/355 (0%)
 Frame = +3

Query: 669  DKGGFSSLQSMG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVDTFST-XXXXXXXXX 842
            +KGGF SLQSMG                              TD+D+FST          
Sbjct: 207  EKGGFMSLQSMGSGRIESTFNDMSISSSGGGGFGSGSGFGLTTDIDSFSTKSKGRPSSSA 266

Query: 843  XXXXXXXXMQLGKTKRKDQFLESLKAEGEVILEDVQPTASQSKSVSVP-TDPVTLTVEEK 1019
                    MQL KT++ +QFLESLKAEGEVILEDV P A  ++S + P TDP+TL+ EE+
Sbjct: 267  TAPPKGLGMQLNKTQKANQFLESLKAEGEVILEDVHPKAGPTRSAAPPLTDPITLSAEER 326

Query: 1020 LNVTLRRDGGLNNFDVQGTLLLQILNQEDGLIQVQVESGENPGILFKTHPNINKDLFNNE 1199
            LNVTL+RDGG++NFDVQGTL LQILNQEDGLIQVQ+E+G NPGILFKTHPNINK+LF+NE
Sbjct: 327  LNVTLKRDGGVSNFDVQGTLSLQILNQEDGLIQVQIETGSNPGILFKTHPNINKELFSNE 386

Query: 1200 NILGLKDPNRPFPTGQSGDAGGVGLLKWRMQSVDEAMVPLTINCWPSDSRNETSVSLEYE 1379
            NILGLKDPNRPFPTGQ GDA GVGLLKWRMQSVDE+ VPLTINCWPS S NET VS+EYE
Sbjct: 387  NILGLKDPNRPFPTGQGGDAAGVGLLKWRMQSVDESDVPLTINCWPSVSGNETYVSIEYE 446

Query: 1380 ASAMFDLRNVIISIPLPALRDAPNVRQVDGEWRYDLRNSILEWSILLIDNTNRSGSMEFV 1559
            AS+MFDLRNV+IS+PLPALR+APNVRQ+DGEWRYD RNSILEWSILLIDN+NRSGSMEFV
Sbjct: 447  ASSMFDLRNVVISVPLPALREAPNVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFV 506

Query: 1560 VPPVDSSAFFPISVRFTAANTFSDLKVVNILPLQGGSSPKFSQRTQLVTESYQVV 1724
            VPP DSS FFPISVRFTAA TFSDLKVVN+LPL+GG  PKFSQRT L+TE+YQVV
Sbjct: 507  VPPADSSVFFPISVRFTAAKTFSDLKVVNVLPLRGGPPPKFSQRTTLITENYQVV 561



 Score =  227 bits (578), Expect(3) = 0.0
 Identities = 112/129 (86%), Positives = 126/129 (97%)
 Frame = +2

Query: 215 VETENVRYVYQPIESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYAPSLDEEGIVKSAFE 394
           VETENVRYVYQPIE+LYLL+VTNKQSNIL+DL+TLRLLSKL+PEY+ SLDEEG+ K+AFE
Sbjct: 79  VETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSVSLDEEGVCKTAFE 138

Query: 395 LIFAADEVISLGHKESVTVAQVKQYCEMESHEEKLHKLVMQSKINETKDVMKRKANEIDK 574
           LIFA DEVISLGHKE+VTVAQVKQYCEMESHEEKLHKLV+QSKINETKDVMKRKA+EIDK
Sbjct: 139 LIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKINETKDVMKRKASEIDK 198

Query: 575 SKIDKSRGD 601
           SKI+K+RG+
Sbjct: 199 SKIEKNRGE 207



 Score = 77.0 bits (188), Expect(3) = 0.0
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +1

Query: 1   VLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHT 135
           VLAASI++KSGK LVSRQ+VDM+RIRIE LLAAFPKLVG GKQHT
Sbjct: 33  VLAASIVSKSGKVLVSRQFVDMTRIRIEALLAAFPKLVGTGKQHT 77


>emb|CAN60953.1| hypothetical protein VITISV_008875 [Vitis vinifera]
          Length = 531

 Score =  486 bits (1252), Expect(3) = 0.0
 Identities = 250/355 (70%), Positives = 281/355 (79%), Gaps = 3/355 (0%)
 Frame = +3

Query: 669  DKGGFSSLQSMG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVDTFST-XXXXXXXXX 842
            +KGGF SLQSMG                              TD+D+FST          
Sbjct: 177  EKGGFMSLQSMGSGRIESTFNDMSISSSGGGGFGSGSGFGLTTDIDSFSTKSKGRPSSSA 236

Query: 843  XXXXXXXXMQLGKTKRKDQFLESLKAEGEVILEDVQPTASQSKSVSVP-TDPVTLTVEEK 1019
                    MQL KT++ +QFLESLKAEGEVILEDV P A  ++S + P TDP+TL+ EE+
Sbjct: 237  TAPPKGLGMQLNKTQKANQFLESLKAEGEVILEDVHPKAGPTRSAAPPLTDPITLSAEER 296

Query: 1020 LNVTLRRDGGLNNFDVQGTLLLQILNQEDGLIQVQVESGENPGILFKTHPNINKDLFNNE 1199
            LNVTL+RDGG++NFDVQGTL LQILNQEDGLIQVQ+E+G NPGILFKTHPNINK+LF+NE
Sbjct: 297  LNVTLKRDGGVSNFDVQGTLSLQILNQEDGLIQVQIETGSNPGILFKTHPNINKELFSNE 356

Query: 1200 NILGLKDPNRPFPTGQSGDAGGVGLLKWRMQSVDEAMVPLTINCWPSDSRNETSVSLEYE 1379
            NILGLKDPNRPFPTGQ GDA GVGLLKWRMQSVDE+ VPLTINCWPS S NET VS+EYE
Sbjct: 357  NILGLKDPNRPFPTGQGGDAAGVGLLKWRMQSVDESDVPLTINCWPSVSGNETYVSIEYE 416

Query: 1380 ASAMFDLRNVIISIPLPALRDAPNVRQVDGEWRYDLRNSILEWSILLIDNTNRSGSMEFV 1559
            AS+MFDLRNV+IS+PLPALR+APNVRQ+DGEWRYD RNSILEWSILLIDN+NRSGSMEFV
Sbjct: 417  ASSMFDLRNVVISVPLPALREAPNVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFV 476

Query: 1560 VPPVDSSAFFPISVRFTAANTFSDLKVVNILPLQGGSSPKFSQRTQLVTESYQVV 1724
            VPP DSS FFPISVRFTAA TFSDLKVVN+LPL+GG  PKFSQRT L+TE+YQVV
Sbjct: 477  VPPADSSVFFPISVRFTAAKTFSDLKVVNVLPLRGGPPPKFSQRTTLITENYQVV 531



 Score =  227 bits (578), Expect(3) = 0.0
 Identities = 112/129 (86%), Positives = 126/129 (97%)
 Frame = +2

Query: 215 VETENVRYVYQPIESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYAPSLDEEGIVKSAFE 394
           VETENVRYVYQPIE+LYLL+VTNKQSNIL+DL+TLRLLSKL+PEY+ SLDEEG+ K+AFE
Sbjct: 49  VETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSVSLDEEGVCKTAFE 108

Query: 395 LIFAADEVISLGHKESVTVAQVKQYCEMESHEEKLHKLVMQSKINETKDVMKRKANEIDK 574
           LIFA DEVISLGHKE+VTVAQVKQYCEMESHEEKLHKLV+QSKINETKDVMKRKA+EIDK
Sbjct: 109 LIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKINETKDVMKRKASEIDK 168

Query: 575 SKIDKSRGD 601
           SKI+K+RG+
Sbjct: 169 SKIEKNRGE 177



 Score = 77.0 bits (188), Expect(3) = 0.0
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +1

Query: 1   VLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHT 135
           VLAASI++KSGK LVSRQ+VDM+RIRIE LLAAFPKLVG GKQHT
Sbjct: 3   VLAASIVSKSGKVLVSRQFVDMTRIRIEALLAAFPKLVGTGKQHT 47


>ref|XP_003555881.1| PREDICTED: coatomer subunit delta-2-like [Glycine max]
          Length = 530

 Score =  470 bits (1209), Expect(3) = 0.0
 Identities = 239/354 (67%), Positives = 277/354 (78%), Gaps = 2/354 (0%)
 Frame = +3

Query: 669  DKGGFSSLQSMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVDTFSTXXXXXXXXXXX 848
            DKGGF  LQSMG                             +DVD+F+T           
Sbjct: 177  DKGGFGPLQSMGSGRIENSFSDLSISSSGTGFGSGSGFGLTSDVDSFATKSKGRPTSSAT 236

Query: 849  XXXXXX-MQLGKTKRKDQFLESLKAEGEVILEDVQPTASQSK-SVSVPTDPVTLTVEEKL 1022
                   M+LGK++R +QFLESLKAEGEVILEDVQP  SQS+ S   PTDP+TLTVEEKL
Sbjct: 237  APPKGLGMKLGKSQRTNQFLESLKAEGEVILEDVQPKLSQSRVSAPPPTDPITLTVEEKL 296

Query: 1023 NVTLRRDGGLNNFDVQGTLLLQILNQEDGLIQVQVESGENPGILFKTHPNINKDLFNNEN 1202
            NVTL+RDGG++NFDVQGTL LQILNQEDG IQVQV++G+N  + FKTHPN+NK+LF N+ 
Sbjct: 297  NVTLKRDGGVSNFDVQGTLSLQILNQEDGHIQVQVQTGDNQAVSFKTHPNMNKELFANDY 356

Query: 1203 ILGLKDPNRPFPTGQSGDAGGVGLLKWRMQSVDEAMVPLTINCWPSDSRNETSVSLEYEA 1382
            ILGLKDPNRPFPTGQ+ DA GVGLLKWRMQS DE+MVPLTINCWPS S NET VS+EYEA
Sbjct: 357  ILGLKDPNRPFPTGQASDAAGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVSIEYEA 416

Query: 1383 SAMFDLRNVIISIPLPALRDAPNVRQVDGEWRYDLRNSILEWSILLIDNTNRSGSMEFVV 1562
            S+MFDL+NV+IS+PLPALR+AP+VRQ+DGEWRYD RNSILEWS+LLIDN+NRSGSMEFVV
Sbjct: 417  SSMFDLQNVVISVPLPALREAPSVRQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVV 476

Query: 1563 PPVDSSAFFPISVRFTAANTFSDLKVVNILPLQGGSSPKFSQRTQLVTESYQVV 1724
            P  DSS FFPISVRF A +TFSDLKV NI+PL+GG+ PKF+QRTQL+T+SYQVV
Sbjct: 477  PLADSSVFFPISVRFMATDTFSDLKVTNIIPLKGGNPPKFAQRTQLITDSYQVV 530



 Score =  226 bits (575), Expect(3) = 0.0
 Identities = 113/129 (87%), Positives = 124/129 (96%)
 Frame = +2

Query: 215 VETENVRYVYQPIESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYAPSLDEEGIVKSAFE 394
           VETENVRYVYQPIE+LYLL+VTNK SNIL+DL+TLRLLSKL+PEY+ SLDEEGI K AFE
Sbjct: 49  VETENVRYVYQPIEALYLLLVTNKNSNILEDLETLRLLSKLVPEYSYSLDEEGICKHAFE 108

Query: 395 LIFAADEVISLGHKESVTVAQVKQYCEMESHEEKLHKLVMQSKINETKDVMKRKANEIDK 574
           LIFA DEVISLGHKE+VTVAQVKQYCEMESHEEKLHKLV+QSKINETKDVMKRKA+EIDK
Sbjct: 109 LIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKINETKDVMKRKASEIDK 168

Query: 575 SKIDKSRGD 601
           SKI+K+RGD
Sbjct: 169 SKIEKNRGD 177



 Score = 79.3 bits (194), Expect(3) = 0.0
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   VLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHT 135
           VLAASI++KSGK LVSRQ+VDM+RIRIEGLLAAFPKLVG GKQHT
Sbjct: 3   VLAASIVSKSGKVLVSRQFVDMTRIRIEGLLAAFPKLVGTGKQHT 47


>ref|XP_002526581.1| coatomer delta subunit, putative [Ricinus communis]
            gi|223534075|gb|EEF35793.1| coatomer delta subunit,
            putative [Ricinus communis]
          Length = 530

 Score =  468 bits (1204), Expect(3) = 0.0
 Identities = 237/355 (66%), Positives = 276/355 (77%), Gaps = 3/355 (0%)
 Frame = +3

Query: 669  DKGGFSSLQSMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVDTFSTXXXXXXXXXXX 848
            DKGGF SLQSMG                             TDVD+FST           
Sbjct: 177  DKGGFMSLQSMGSGRIESKFSDMSISSNEGGFGSGSGFGLTTDVDSFSTKSKGRQPSSAT 236

Query: 849  XXXXXX-MQLGKTKRKDQFLESLKAEGEVILEDVQPTASQSKSVSV--PTDPVTLTVEEK 1019
                   M+LGKT+R+ QFLESLKAEGE I+E+VQP   QS+S +   PTDP+TLTVEE+
Sbjct: 237  APPKGLGMKLGKTRRESQFLESLKAEGEDIVEEVQPKPGQSRSAAALAPTDPITLTVEER 296

Query: 1020 LNVTLRRDGGLNNFDVQGTLLLQILNQEDGLIQVQVESGENPGILFKTHPNINKDLFNNE 1199
            +NVTL+RDGGL++FDVQG L LQILNQEDGLIQVQ+E+G NP +LFKTHPN+NK+LF NE
Sbjct: 297  INVTLKRDGGLSSFDVQGQLSLQILNQEDGLIQVQIETGGNPNVLFKTHPNMNKELFANE 356

Query: 1200 NILGLKDPNRPFPTGQSGDAGGVGLLKWRMQSVDEAMVPLTINCWPSDSRNETSVSLEYE 1379
            NILGLKDPNRPFPTG +GD  GVGLLKWRMQ  DE+MVPLTINCWPS S N+T VS+EYE
Sbjct: 357  NILGLKDPNRPFPTG-TGDPAGVGLLKWRMQGADESMVPLTINCWPSVSGNQTFVSIEYE 415

Query: 1380 ASAMFDLRNVIISIPLPALRDAPNVRQVDGEWRYDLRNSILEWSILLIDNTNRSGSMEFV 1559
            AS+MFDLRNV+IS+PLPALR+AP+V  +DGEWRYD RNS+LEWSILLIDN+NRSG MEFV
Sbjct: 416  ASSMFDLRNVVISVPLPALREAPSVGDIDGEWRYDSRNSVLEWSILLIDNSNRSGQMEFV 475

Query: 1560 VPPVDSSAFFPISVRFTAANTFSDLKVVNILPLQGGSSPKFSQRTQLVTESYQVV 1724
            VPP DSS FFPISVRF+A +T+SDLKVVN+LPL+GG SPKF+QRTQL+ ESYQ+V
Sbjct: 476  VPPADSSTFFPISVRFSATSTYSDLKVVNVLPLRGGPSPKFAQRTQLIAESYQIV 530



 Score =  225 bits (574), Expect(3) = 0.0
 Identities = 114/129 (88%), Positives = 123/129 (95%)
 Frame = +2

Query: 215 VETENVRYVYQPIESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYAPSLDEEGIVKSAFE 394
           VETENVRYVYQPIE LYLL+VTNKQSNIL+DLDTL  LSKL+PEYA SLDEEGI K+AFE
Sbjct: 49  VETENVRYVYQPIEVLYLLLVTNKQSNILEDLDTLSRLSKLVPEYAISLDEEGICKTAFE 108

Query: 395 LIFAADEVISLGHKESVTVAQVKQYCEMESHEEKLHKLVMQSKINETKDVMKRKANEIDK 574
           LIFA DEVISLGHKE+VTVAQVKQYCEMESHEEKLHKLV+QSKINETKDVMKRKA+EIDK
Sbjct: 109 LIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKINETKDVMKRKASEIDK 168

Query: 575 SKIDKSRGD 601
           SKI+K+RGD
Sbjct: 169 SKIEKNRGD 177



 Score = 79.0 bits (193), Expect(3) = 0.0
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   VLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHT 135
           VLAASI++KSGK LVSRQ+VDMSR+RIEGLLAAFPKL+G GKQHT
Sbjct: 3   VLAASIVSKSGKVLVSRQFVDMSRMRIEGLLAAFPKLIGTGKQHT 47


>ref|XP_003536700.1| PREDICTED: coatomer subunit delta-2-like [Glycine max]
          Length = 530

 Score =  461 bits (1187), Expect(3) = 0.0
 Identities = 234/354 (66%), Positives = 276/354 (77%), Gaps = 2/354 (0%)
 Frame = +3

Query: 669  DKGGFSSLQSMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVDTFSTXXXXXXXXXXX 848
            DKGGF  LQSMG                             +DVD+F+T           
Sbjct: 177  DKGGFGPLQSMGSGRIENSFSDLSISSSGTGFGSGSGFGLTSDVDSFATKPKGRPTSSAT 236

Query: 849  XXXXXX-MQLGKTKRKDQFLESLKAEGEVILEDVQPTASQSKSVSVP-TDPVTLTVEEKL 1022
                   M+LGK++R +QFLESLKAEGEVILEDVQP  SQS++ +   TDP+TLTVEEKL
Sbjct: 237  APPKGLGMKLGKSQRTNQFLESLKAEGEVILEDVQPKHSQSRAAAPQLTDPITLTVEEKL 296

Query: 1023 NVTLRRDGGLNNFDVQGTLLLQILNQEDGLIQVQVESGENPGILFKTHPNINKDLFNNEN 1202
            NV L+RDGG++NFDVQGTL LQILNQEDG IQVQV++G+N  + FKTHPN+NK+LF N+ 
Sbjct: 297  NVILKRDGGVSNFDVQGTLSLQILNQEDGHIQVQVQTGDNQAVSFKTHPNMNKELFANDY 356

Query: 1203 ILGLKDPNRPFPTGQSGDAGGVGLLKWRMQSVDEAMVPLTINCWPSDSRNETSVSLEYEA 1382
            ILGLKDPNRPFPTGQ+ DAGGVGLLKWRMQS DE+MVPLTINCWPS S NET V++EYEA
Sbjct: 357  ILGLKDPNRPFPTGQASDAGGVGLLKWRMQSTDESMVPLTINCWPSSSGNETYVNIEYEA 416

Query: 1383 SAMFDLRNVIISIPLPALRDAPNVRQVDGEWRYDLRNSILEWSILLIDNTNRSGSMEFVV 1562
            S+MFDLRNV+IS+PLPAL++AP+VRQ+DGEWRYD RNSILEWS+LLIDN+NRSGSMEFVV
Sbjct: 417  SSMFDLRNVVISVPLPALQEAPSVRQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVV 476

Query: 1563 PPVDSSAFFPISVRFTAANTFSDLKVVNILPLQGGSSPKFSQRTQLVTESYQVV 1724
            P  DSS FFPISV F A +TFSDLKV NI+PL+GG+ PKF+QRTQL+T+SYQ+V
Sbjct: 477  PLADSSTFFPISVCFMATDTFSDLKVTNIIPLKGGNPPKFAQRTQLITDSYQIV 530



 Score =  225 bits (574), Expect(3) = 0.0
 Identities = 112/129 (86%), Positives = 124/129 (96%)
 Frame = +2

Query: 215 VETENVRYVYQPIESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYAPSLDEEGIVKSAFE 394
           VETENVRYVYQPIE+LYLL+VTNK SNIL+DL+TLRLLSKL+PEY+ SLDEEG+ K AFE
Sbjct: 49  VETENVRYVYQPIEALYLLLVTNKNSNILEDLETLRLLSKLVPEYSYSLDEEGVCKHAFE 108

Query: 395 LIFAADEVISLGHKESVTVAQVKQYCEMESHEEKLHKLVMQSKINETKDVMKRKANEIDK 574
           LIFA DEVISLGHKE+VTVAQVKQYCEMESHEEKLHKLV+QSKINETKDVMKRKA+EIDK
Sbjct: 109 LIFAFDEVISLGHKENVTVAQVKQYCEMESHEEKLHKLVLQSKINETKDVMKRKASEIDK 168

Query: 575 SKIDKSRGD 601
           SKI+K+RGD
Sbjct: 169 SKIEKNRGD 177



 Score = 79.3 bits (194), Expect(3) = 0.0
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   VLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHT 135
           VLAASI++KSGK LVSRQ+VDM+RIRIEGLLAAFPKLVG GKQHT
Sbjct: 3   VLAASIVSKSGKVLVSRQFVDMTRIRIEGLLAAFPKLVGTGKQHT 47


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