BLASTX nr result

ID: Coptis25_contig00002096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002096
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40262.3| unnamed protein product [Vitis vinifera]              272   6e-71
ref|XP_002282581.2| PREDICTED: protein unc-50 homolog [Vitis vin...   270   2e-70
ref|XP_002518676.1| conserved hypothetical protein [Ricinus comm...   262   8e-68
gb|AAM61449.1| unknown [Arabidopsis thaliana]                         254   2e-65
ref|XP_002885951.1| hypothetical protein ARALYDRAFT_899735 [Arab...   254   2e-65

>emb|CBI40262.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  272 bits (696), Expect = 6e-71
 Identities = 125/148 (84%), Positives = 136/148 (91%)
 Frame = -2

Query: 691 MLPTVSSKGRTASNVRSNPVFPQYLRRIVKWQQMDIEYTFWQMLHLCTAPKVVYQHTKYH 512
           MLPTVS KGR+ SN R NP+F QYLRRI+KWQQMDIEYTFWQMLHLCT+PKVVYQHTKYH
Sbjct: 1   MLPTVS-KGRSPSNSRPNPMFLQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 59

Query: 511 KQTKNQWARDDPAFVVICSLLLVVATSAYCATYDHSVAHAIFTVVSVLVFHFLVTGVVVA 332
           KQTKNQWARDDPAFVVICSLLLVVATSAYCA YDHS AHA+F V+SVL+FHFL+TG+ +A
Sbjct: 60  KQTKNQWARDDPAFVVICSLLLVVATSAYCAAYDHSSAHAVFVVISVLLFHFLITGIFLA 119

Query: 331 TCCWFLTNTYLREEVPSSHAVEQRVEWQ 248
           TCCWFLTN YLREE P+SH VEQRVEWQ
Sbjct: 120 TCCWFLTNAYLREEAPNSHVVEQRVEWQ 147


>ref|XP_002282581.2| PREDICTED: protein unc-50 homolog [Vitis vinifera]
          Length = 251

 Score =  270 bits (691), Expect = 2e-70
 Identities = 124/147 (84%), Positives = 135/147 (91%)
 Frame = -2

Query: 691 MLPTVSSKGRTASNVRSNPVFPQYLRRIVKWQQMDIEYTFWQMLHLCTAPKVVYQHTKYH 512
           MLPTVS KGR+ SN R NP+F QYLRRI+KWQQMDIEYTFWQMLHLCT+PKVVYQHTKYH
Sbjct: 1   MLPTVS-KGRSPSNSRPNPMFLQYLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYH 59

Query: 511 KQTKNQWARDDPAFVVICSLLLVVATSAYCATYDHSVAHAIFTVVSVLVFHFLVTGVVVA 332
           KQTKNQWARDDPAFVVICSLLLVVATSAYCA YDHS AHA+F V+SVL+FHFL+TG+ +A
Sbjct: 60  KQTKNQWARDDPAFVVICSLLLVVATSAYCAAYDHSSAHAVFVVISVLLFHFLITGIFLA 119

Query: 331 TCCWFLTNTYLREEVPSSHAVEQRVEW 251
           TCCWFLTN YLREE P+SH VEQRVEW
Sbjct: 120 TCCWFLTNAYLREEAPNSHVVEQRVEW 146


>ref|XP_002518676.1| conserved hypothetical protein [Ricinus communis]
           gi|223542057|gb|EEF43601.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score =  262 bits (669), Expect = 8e-68
 Identities = 123/149 (82%), Positives = 133/149 (89%), Gaps = 2/149 (1%)
 Frame = -2

Query: 691 MLPTVSSKGRT--ASNVRSNPVFPQYLRRIVKWQQMDIEYTFWQMLHLCTAPKVVYQHTK 518
           MLPT SSK RT  AS  R +P+FPQYLRRIVKWQQMDIEYTFWQMLHLCT+PKVVYQHTK
Sbjct: 1   MLPT-SSKIRTSSASTSRPSPMFPQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTK 59

Query: 517 YHKQTKNQWARDDPAFVVICSLLLVVATSAYCATYDHSVAHAIFTVVSVLVFHFLVTGVV 338
           YHKQTKNQWARDDPAFVVICSLLL VAT AYCA YDHS  HA+F V+SVL+FHFL+TGVV
Sbjct: 60  YHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSTGHAVFVVISVLLFHFLITGVV 119

Query: 337 VATCCWFLTNTYLREEVPSSHAVEQRVEW 251
           +ATCCWF+TN YLREE P+SH VEQRVEW
Sbjct: 120 LATCCWFMTNAYLREEAPNSHVVEQRVEW 148


>gb|AAM61449.1| unknown [Arabidopsis thaliana]
          Length = 252

 Score =  254 bits (649), Expect = 2e-65
 Identities = 114/147 (77%), Positives = 130/147 (88%)
 Frame = -2

Query: 691 MLPTVSSKGRTASNVRSNPVFPQYLRRIVKWQQMDIEYTFWQMLHLCTAPKVVYQHTKYH 512
           MLPT S    ++S+ R+NP+F QY RRIVKWQQMD+EYTFWQML+LCT+PKVVYQHTKYH
Sbjct: 1   MLPTTSRSRSSSSSSRANPMFLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYH 60

Query: 511 KQTKNQWARDDPAFVVICSLLLVVATSAYCATYDHSVAHAIFTVVSVLVFHFLVTGVVVA 332
           KQTKNQWARDDPAF+VICSLLLVVAT AYC TYDHS +HA+  VVSVL+ HFL+TG V+A
Sbjct: 61  KQTKNQWARDDPAFIVICSLLLVVATVAYCVTYDHSSSHAVVVVVSVLLTHFLITGAVIA 120

Query: 331 TCCWFLTNTYLREEVPSSHAVEQRVEW 251
           TCCWFLTN+YLREE P+SH VEQRVEW
Sbjct: 121 TCCWFLTNSYLREETPNSHVVEQRVEW 147


>ref|XP_002885951.1| hypothetical protein ARALYDRAFT_899735 [Arabidopsis lyrata subsp.
           lyrata] gi|297331791|gb|EFH62210.1| hypothetical protein
           ARALYDRAFT_899735 [Arabidopsis lyrata subsp. lyrata]
          Length = 252

 Score =  254 bits (648), Expect = 2e-65
 Identities = 114/147 (77%), Positives = 130/147 (88%)
 Frame = -2

Query: 691 MLPTVSSKGRTASNVRSNPVFPQYLRRIVKWQQMDIEYTFWQMLHLCTAPKVVYQHTKYH 512
           MLPT S    ++S+ R+NP+F QY RRIVKWQQMD+EYTFWQML+LCT+PKVVYQHTKYH
Sbjct: 1   MLPTTSRSRSSSSSSRANPMFLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYH 60

Query: 511 KQTKNQWARDDPAFVVICSLLLVVATSAYCATYDHSVAHAIFTVVSVLVFHFLVTGVVVA 332
           KQTKNQWARDDPAF+VICSLLLVVAT AYC TYDHS +HA+  VVSVL+ HFL+TG V+A
Sbjct: 61  KQTKNQWARDDPAFIVICSLLLVVATVAYCVTYDHSGSHAVVVVVSVLLTHFLITGAVIA 120

Query: 331 TCCWFLTNTYLREEVPSSHAVEQRVEW 251
           TCCWFLTN+YLREE P+SH VEQRVEW
Sbjct: 121 TCCWFLTNSYLREETPNSHVVEQRVEW 147


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