BLASTX nr result

ID: Coptis25_contig00002095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002095
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|2...   216   1e-54
ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250...   204   1e-50
emb|CBI16424.3| unnamed protein product [Vitis vinifera]              204   1e-50
ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246...   203   1e-50

>ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  216 bits (551), Expect = 1e-54
 Identities = 111/182 (60%), Positives = 139/182 (76%), Gaps = 4/182 (2%)
 Frame = -2

Query: 555  VLMNSNNAITMEKMPESGTDAALQATFRFVSEDLNSAHSFSENSFIGKTVMMEPFDLPGL 376
            VL NSN +ITME+ P+SGTDA LQATFR V  D +S+     N  I K+VM+EPFDLPG+
Sbjct: 674  VLTNSNQSITMEEHPKSGTDACLQATFRIVFNDSSSSEVLGINDVIDKSVMLEPFDLPGM 733

Query: 375  LVVQEGKNQNLAVGDT---EGSSMFRVVTGLD-KKGTVSLESVSQKGCFLYTGVNYKAGT 208
            L+VQ+GK+ +LAV ++   +GSS+F VV GLD K GTVSLES SQ+GC++Y+GVNYK+G 
Sbjct: 734  LLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSLESGSQEGCYIYSGVNYKSGQ 793

Query: 207  KIRLSCRSGLKDAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTVY 28
             ++LSC+ G  D  F Q  SF ++KGLSEYHPISFVA G KR FLL PL S+RDE YT+Y
Sbjct: 794  SMKLSCKLGSSDPGFNQGASFVMNKGLSEYHPISFVAEGDKRNFLLAPLHSLRDEFYTIY 853

Query: 27   FN 22
            FN
Sbjct: 854  FN 855


>ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  214 bits (544), Expect = 1e-53
 Identities = 110/183 (60%), Positives = 142/183 (77%), Gaps = 5/183 (2%)
 Frame = -2

Query: 555  VLMNSNNAITMEKMPESGTDAALQATFRFVSEDLNSAHSFSENSFIGKTVMMEPFDLPGL 376
            VL NSN +I+MEK+PESGTDA+LQATFR V +D +S+   S    IGK+VM+EPF LPG+
Sbjct: 673  VLTNSNQSISMEKLPESGTDASLQATFRLVFKDSSSSKLSSVKDVIGKSVMLEPFHLPGM 732

Query: 375  LVVQEGKNQNLAV---GDTEGSSMFRVVTGLD-KKGTVSLESVSQKGCFLYTGVNYKAGT 208
            L+VQ+GK+++  +    D +GSS+FRVV+GLD K GTVSLES  Q GC++Y+GV+YK+G 
Sbjct: 733  LLVQQGKDRSFTLTNSADDDGSSIFRVVSGLDGKDGTVSLESGIQNGCYVYSGVDYKSGQ 792

Query: 207  KIRLSCRSG-LKDAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTV 31
             ++LSC+SG   D  F Q  SF ++KGLS+YHPISFVA G KR FLL PL S+RDESYT+
Sbjct: 793  SMKLSCKSGSSSDTGFNQGASFVMNKGLSQYHPISFVAKGDKRNFLLAPLHSLRDESYTI 852

Query: 30   YFN 22
            YFN
Sbjct: 853  YFN 855


>ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera]
          Length = 874

 Score =  204 bits (518), Expect = 1e-50
 Identities = 105/184 (57%), Positives = 132/184 (71%), Gaps = 4/184 (2%)
 Frame = -2

Query: 546  NSNNAITMEKMPESGTDAALQATFRFVSEDLNSAHSFSENSFIGKTVMMEPFDLPGLLVV 367
            NSN ++TME+ PESGTDA+L ATFR + ED  S+   S    IGK VM+EP + PG+ VV
Sbjct: 685  NSNQSLTMERYPESGTDASLNATFRLILEDSTSSKISSPKDAIGKFVMLEPINFPGMAVV 744

Query: 366  QEGKNQNLAVGDTE---GSSMFRVVTGLD-KKGTVSLESVSQKGCFLYTGVNYKAGTKIR 199
            Q G N++L + ++    GSS+F +V GLD K GTVSLES +QKGCF+Y+ VNY +G+ I+
Sbjct: 745  QRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVSLESKTQKGCFVYSDVNYDSGSAIK 804

Query: 198  LSCRSGLKDAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTVYFNR 19
            L C+    D  F QATSF L  G+SEYHPISFVA G +R +LL PLLS+RDESYTVYFN 
Sbjct: 805  LKCKLASSDVVFNQATSFTLKHGISEYHPISFVAKGLRRDYLLAPLLSLRDESYTVYFNI 864

Query: 18   GA*N 7
             A N
Sbjct: 865  QASN 868


>emb|CBI16424.3| unnamed protein product [Vitis vinifera]
          Length = 741

 Score =  204 bits (518), Expect = 1e-50
 Identities = 105/184 (57%), Positives = 132/184 (71%), Gaps = 4/184 (2%)
 Frame = -2

Query: 546  NSNNAITMEKMPESGTDAALQATFRFVSEDLNSAHSFSENSFIGKTVMMEPFDLPGLLVV 367
            NSN ++TME+ PESGTDA+L ATFR + ED  S+   S    IGK VM+EP + PG+ VV
Sbjct: 552  NSNQSLTMERYPESGTDASLNATFRLILEDSTSSKISSPKDAIGKFVMLEPINFPGMAVV 611

Query: 366  QEGKNQNLAVGDTE---GSSMFRVVTGLD-KKGTVSLESVSQKGCFLYTGVNYKAGTKIR 199
            Q G N++L + ++    GSS+F +V GLD K GTVSLES +QKGCF+Y+ VNY +G+ I+
Sbjct: 612  QRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVSLESKTQKGCFVYSDVNYDSGSAIK 671

Query: 198  LSCRSGLKDAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTVYFNR 19
            L C+    D  F QATSF L  G+SEYHPISFVA G +R +LL PLLS+RDESYTVYFN 
Sbjct: 672  LKCKLASSDVVFNQATSFTLKHGISEYHPISFVAKGLRRDYLLAPLLSLRDESYTVYFNI 731

Query: 18   GA*N 7
             A N
Sbjct: 732  QASN 735


>ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]
          Length = 864

 Score =  203 bits (517), Expect = 1e-50
 Identities = 106/183 (57%), Positives = 131/183 (71%), Gaps = 5/183 (2%)
 Frame = -2

Query: 555  VLMNSNNAITMEKMPESGTDAALQATFRFVSEDLNSAHSFSENSFIGKTVMMEPFDLPGL 376
            V  NSN +ITMEK PE GTDA+L ATFR V +D  S    S    IGK+VM+EP DLPG+
Sbjct: 679  VFSNSNQSITMEKFPEEGTDASLHATFRLVLKDATSLKVLSPKDAIGKSVMLEPIDLPGM 738

Query: 375  LVVQEGKNQNLAVGDTEG--SSMFRVVTGLD-KKGTVSLESVSQKGCFLYTGVNYKAGTK 205
            +VVQ+G NQNL + ++     S+F +V GLD K GTVSLES SQK C++Y+G++Y +GT 
Sbjct: 739  VVVQQGTNQNLGIANSAAGKGSLFHLVAGLDGKDGTVSLESESQKDCYVYSGIDYNSGTS 798

Query: 204  IRLS--CRSGLKDAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTV 31
            I+L     SG  D  F +ATSF L +G+S+YHPISFVA G KR FLL PLL +RDESYTV
Sbjct: 799  IKLKSLSESGSSDEDFNKATSFILKEGISQYHPISFVAKGMKRNFLLTPLLGLRDESYTV 858

Query: 30   YFN 22
            YFN
Sbjct: 859  YFN 861


Top