BLASTX nr result

ID: Coptis25_contig00002091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002091
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325840.1| predicted protein [Populus trichocarpa] gi|2...    84   3e-14
ref|XP_002283663.2| PREDICTED: uncharacterized protein LOC100258...    81   3e-13
ref|XP_002525421.1| conserved hypothetical protein [Ricinus comm...    80   6e-13
ref|XP_002523424.1| conserved hypothetical protein [Ricinus comm...    77   4e-12
ref|XP_002299101.1| predicted protein [Populus trichocarpa] gi|2...    77   4e-12

>ref|XP_002325840.1| predicted protein [Populus trichocarpa] gi|222862715|gb|EEF00222.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = +1

Query: 676 SHQSSSPEKEERYYTTRGSVGVDENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDF 855
           + +SSSPEKE+RYYTTRGSVG+DENGK  MD    N   K +VWPKL+ +LSSKEKEEDF
Sbjct: 94  NRKSSSPEKEDRYYTTRGSVGLDENGKVSMD--GNNGDDKAHVWPKLYTTLSSKEKEEDF 151

Query: 856 M 858
           M
Sbjct: 152 M 152


>ref|XP_002283663.2| PREDICTED: uncharacterized protein LOC100258776 [Vitis vinifera]
           gi|147858690|emb|CAN78878.1| hypothetical protein
           VITISV_024989 [Vitis vinifera]
           gi|297746483|emb|CBI16539.3| unnamed protein product
           [Vitis vinifera]
          Length = 212

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 43/64 (67%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = +1

Query: 670 NPSHQSSSPEKEERYYTTRGSVGV-DENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKE 846
           N    ++SPEKE+RYYTTRGS+G+ D+NGK LMD G E+   +  VWPKLFISLSSKEKE
Sbjct: 87  NRKISATSPEKEDRYYTTRGSMGMMDDNGKVLMDHGGED---RGTVWPKLFISLSSKEKE 143

Query: 847 EDFM 858
           EDFM
Sbjct: 144 EDFM 147


>ref|XP_002525421.1| conserved hypothetical protein [Ricinus communis]
           gi|223535234|gb|EEF36911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 222

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 42/62 (67%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
 Frame = +1

Query: 682 QSSSPEKEERYYTTRGSV---GVDENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEED 852
           +S+SPEKE+RYYTTRGSV   GVDENGK   D    ++ K   VWPKL+ISLSSKEKEED
Sbjct: 96  KSASPEKEDRYYTTRGSVVGVGVDENGKVSWDANNGDDNKGHVVWPKLYISLSSKEKEED 155

Query: 853 FM 858
           FM
Sbjct: 156 FM 157


>ref|XP_002523424.1| conserved hypothetical protein [Ricinus communis]
           gi|223537374|gb|EEF39003.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 38/63 (60%), Positives = 47/63 (74%)
 Frame = +1

Query: 670 NPSHQSSSPEKEERYYTTRGSVGVDENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEE 849
           N    + SPEKE+RYY TRGS+G+D+N K LMD      + K +VWP+LFI+LSSKEKEE
Sbjct: 72  NKKSSALSPEKEDRYYATRGSLGLDDNSKVLMD---NAREAKGHVWPRLFITLSSKEKEE 128

Query: 850 DFM 858
           DFM
Sbjct: 129 DFM 131


>ref|XP_002299101.1| predicted protein [Populus trichocarpa] gi|222846359|gb|EEE83906.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 37/56 (66%), Positives = 47/56 (83%)
 Frame = +1

Query: 691 SPEKEERYYTTRGSVGVDENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDFM 858
           SP+KE+RYYTTRGS+G+D+N K LMD    N K++  VWP+LFI+LS+KEKEEDFM
Sbjct: 83  SPDKEDRYYTTRGSMGLDDNSKILMD----NVKEEKVVWPRLFIALSNKEKEEDFM 134


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