BLASTX nr result

ID: Coptis25_contig00002090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002090
         (2463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532119.1| conserved hypothetical protein [Ricinus comm...   426   e-116
ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|2...   419   e-114
ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein ...   417   e-114
emb|CBI20114.3| unnamed protein product [Vitis vinifera]              417   e-114
ref|XP_004137222.1| PREDICTED: uncharacterized membrane protein ...   412   e-112

>ref|XP_002532119.1| conserved hypothetical protein [Ricinus communis]
            gi|223528199|gb|EEF30259.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 320

 Score =  426 bits (1094), Expect = e-116
 Identities = 218/300 (72%), Positives = 250/300 (83%)
 Frame = -3

Query: 1051 KPIIKLYSKPKLIKLHPSPKMLSFKAHSLPDSSFQTTVISTVFDLIQTSPPTWASSIFSN 872
            K I+ L S P L K+ P  K         P++      +S   +LIQ++PPTW S++ +N
Sbjct: 27   KKILTLNSNPGLPKMLPQEKQTQ-----TPNAVSMQGALSGAMNLIQSAPPTWQSALVNN 81

Query: 871  VLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAFGPTGFLLVATYFVLGTAVTKVKMAQK 692
            VLIF  GSPIL++GLSLSGI  AFLLGTLTWRAFGP+GFLLVA YFV+GTA TKVKMAQK
Sbjct: 82   VLIFILGSPILLSGLSLSGICAAFLLGTLTWRAFGPSGFLLVACYFVIGTAATKVKMAQK 141

Query: 691  EALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGAAFSSLWQLGFVASFCTKLSDT 512
            EA GVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGG AFS LW+LGFVASFCTKLSDT
Sbjct: 142  EAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGEAFSRLWELGFVASFCTKLSDT 201

Query: 511  VSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTIAGLLASILLAYVGCLVGEVNAVEA 332
            VSSEIGKAYGK TYLVTTFK+VPRGTEGAVSVEGT+AGLLASILLA +GC +GE++  EA
Sbjct: 202  VSSEIGKAYGKITYLVTTFKIVPRGTEGAVSVEGTLAGLLASILLASIGCFLGEIHIPEA 261

Query: 331  AICVVASQIANLGESMIGAILQDKEGFKWLNNDAVNVINISLGSILAVLIQQTVTQNWHQ 152
             ICV+ASQIAN+GES+IGA  Q+KEGF+WLNND VNV+NIS+GSILAVL+QQ + QN H+
Sbjct: 262  VICVIASQIANVGESIIGATFQEKEGFRWLNNDVVNVLNISIGSILAVLMQQ-LLQNLHK 320


>ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|222860506|gb|EEE98053.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  419 bits (1077), Expect = e-114
 Identities = 209/255 (81%), Positives = 235/255 (92%)
 Frame = -3

Query: 940 VISTVFDLIQTSPPTWASSIFSNVLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAFGPT 761
           V+S   +LIQ++ PTW S++FSN+LIF  GSPILV+GLSLSGI  A+LLGTLTWRAFG +
Sbjct: 14  VLSDAMNLIQSAHPTWKSALFSNLLIFVVGSPILVSGLSLSGIFAAYLLGTLTWRAFGAS 73

Query: 760 GFLLVATYFVLGTAVTKVKMAQKEALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVG 581
           GFLLVA+YFV+GTAVTKVKMAQKEA GVAEKRKGRRGPGSVIGSSAAGCVCAFLSI+G G
Sbjct: 74  GFLLVASYFVIGTAVTKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGTG 133

Query: 580 GAAFSSLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTIA 401
           G AF +LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVS EGT+A
Sbjct: 134 GRAFIALWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSAEGTLA 193

Query: 400 GLLASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMIGAILQDKEGFKWLNNDAVNV 221
           GLLASILLA +GC++GE+NA EA ICV+ASQIAN+GES+IGA  Q+KEGF+WLNNDAVNV
Sbjct: 194 GLLASILLASIGCILGEINAPEAVICVIASQIANVGESIIGAAFQEKEGFQWLNNDAVNV 253

Query: 220 INISLGSILAVLIQQ 176
           INIS+GSILAVL+QQ
Sbjct: 254 INISVGSILAVLMQQ 268


>ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein sll0875-like [Vitis
           vinifera]
          Length = 315

 Score =  417 bits (1072), Expect = e-114
 Identities = 218/275 (79%), Positives = 238/275 (86%), Gaps = 1/275 (0%)
 Frame = -3

Query: 997 PKM-LSFKAHSLPDSSFQTTVISTVFDLIQTSPPTWASSIFSNVLIFTFGSPILVTGLSL 821
           PKM L+ KA   P   F+  V S    LIQ+SP TW S++ +N LIF  G+PILV+GLSL
Sbjct: 37  PKMPLTAKALPNPVPGFRGAV-SEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSL 95

Query: 820 SGIATAFLLGTLTWRAFGPTGFLLVATYFVLGTAVTKVKMAQKEALGVAEKRKGRRGPGS 641
           SGIA AFLLGTLTWRAFG  GFLLVATYFV+GTA TKVKMAQKEA GVAEKRKGRRGPGS
Sbjct: 96  SGIAAAFLLGTLTWRAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGS 155

Query: 640 VIGSSAAGCVCAFLSIYGVGGAAFSSLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT 461
           VIGSSAAGCVCAFLSIYGVGG AF  LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT
Sbjct: 156 VIGSSAAGCVCAFLSIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT 215

Query: 460 TFKVVPRGTEGAVSVEGTIAGLLASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMI 281
           T K+VPRGTEGAVS EGT AGLLASILLA+VGCL+G+++AVEA ICVVA+QIANLGES I
Sbjct: 216 TLKIVPRGTEGAVSAEGTSAGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFI 275

Query: 280 GAILQDKEGFKWLNNDAVNVINISLGSILAVLIQQ 176
           GA LQ KEGF+WLNND VNVINIS+GSILA+LIQ+
Sbjct: 276 GAALQGKEGFRWLNNDVVNVINISMGSILAILIQK 310


>emb|CBI20114.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  417 bits (1072), Expect = e-114
 Identities = 218/275 (79%), Positives = 238/275 (86%), Gaps = 1/275 (0%)
 Frame = -3

Query: 997  PKM-LSFKAHSLPDSSFQTTVISTVFDLIQTSPPTWASSIFSNVLIFTFGSPILVTGLSL 821
            PKM L+ KA   P   F+  V S    LIQ+SP TW S++ +N LIF  G+PILV+GLSL
Sbjct: 384  PKMPLTAKALPNPVPGFRGAV-SEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSL 442

Query: 820  SGIATAFLLGTLTWRAFGPTGFLLVATYFVLGTAVTKVKMAQKEALGVAEKRKGRRGPGS 641
            SGIA AFLLGTLTWRAFG  GFLLVATYFV+GTA TKVKMAQKEA GVAEKRKGRRGPGS
Sbjct: 443  SGIAAAFLLGTLTWRAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGS 502

Query: 640  VIGSSAAGCVCAFLSIYGVGGAAFSSLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT 461
            VIGSSAAGCVCAFLSIYGVGG AF  LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT
Sbjct: 503  VIGSSAAGCVCAFLSIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT 562

Query: 460  TFKVVPRGTEGAVSVEGTIAGLLASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMI 281
            T K+VPRGTEGAVS EGT AGLLASILLA+VGCL+G+++AVEA ICVVA+QIANLGES I
Sbjct: 563  TLKIVPRGTEGAVSAEGTSAGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFI 622

Query: 280  GAILQDKEGFKWLNNDAVNVINISLGSILAVLIQQ 176
            GA LQ KEGF+WLNND VNVINIS+GSILA+LIQ+
Sbjct: 623  GAALQGKEGFRWLNNDVVNVINISMGSILAILIQK 657


>ref|XP_004137222.1| PREDICTED: uncharacterized membrane protein sll0875-like [Cucumis
            sativus] gi|449517377|ref|XP_004165722.1| PREDICTED:
            uncharacterized membrane protein sll0875-like [Cucumis
            sativus]
          Length = 313

 Score =  412 bits (1058), Expect = e-112
 Identities = 214/308 (69%), Positives = 251/308 (81%), Gaps = 2/308 (0%)
 Frame = -3

Query: 1087 LSFPTTI-PSTSSKPIIKLYSKPKLIKLHPSPKM-LSFKAHSLPDSSFQTTVISTVFDLI 914
            L FP  + P     P++    KP + K +P+P   +  +A S        T+ S   +L+
Sbjct: 9    LPFPLLLSPKRHQFPLLPFPLKPLITKSNPNPSSKMVVRAQSFE------TLASGAVNLL 62

Query: 913  QTSPPTWASSIFSNVLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAFGPTGFLLVATYF 734
            Q++P TW S++ SN+LIF  GSPILV+GLS SGIA+AFLLGTLTWRAFGP+GFLLVATYF
Sbjct: 63   QSNPATWHSALLSNLLIFLLGSPILVSGLSPSGIASAFLLGTLTWRAFGPSGFLLVATYF 122

Query: 733  VLGTAVTKVKMAQKEALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGAAFSSLWQ 554
            V+GTA TKVKMAQKEA GVAEKRKGRRGPGSVIGSSAAGCVCA L I  VGG AF+ LW+
Sbjct: 123  VIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFAQLWR 182

Query: 553  LGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSVEGTIAGLLASILLA 374
            LGFVASFCTKLSDTVSSEIGKAYG+ TYLVT FKVVPRGTEGAVS+EGT AGLLA+I LA
Sbjct: 183  LGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAAIALA 242

Query: 373  YVGCLVGEVNAVEAAICVVASQIANLGESMIGAILQDKEGFKWLNNDAVNVINISLGSIL 194
            +VGCL+G+V A EA +CV+ASQIANLGES+IGA+LQ+KEGF+WLNND VNVINIS+GSIL
Sbjct: 243  FVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMGSIL 302

Query: 193  AVLIQQTV 170
            AVL+QQ +
Sbjct: 303  AVLMQQLI 310


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