BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002087
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   290   3e-76
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   285   9e-75
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   285   1e-74
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   283   5e-74
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   281   1e-73

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  290 bits (743), Expect = 3e-76
 Identities = 138/317 (43%), Positives = 213/317 (67%)
 Frame = +2

Query: 41   GDWQEGRTEVGTSLNQYFKEIFTSDQPEINEDILNLFQPCVTPTENDRLTAIPTSEEIWA 220
            G W E   +    + ++FK++FTS+  + ++ +L++    V+   N+ L A  T EE+  
Sbjct: 632  GSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKE 691

Query: 221  VVKKMGSLKSPGPDGFQGIFYQKCWDTIGPTVVDFVQDFFNLGSLNPEVNETFITLIPKV 400
             +  +G LK+PGPDG    FY+ CWD +G  V D V +    G++    N+  I LIPKV
Sbjct: 692  ALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKV 751

Query: 401  ANPDHASKFRPISLCNFGYKIISKILANRLKGLINNIISPFQGAFIKGRSIGDNVGLACE 580
              P+     RPISLCN  YK++SK+LANRLK ++ ++ISP Q AF+ GR I DN+ +A E
Sbjct: 752  KKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADE 811

Query: 581  VFHNMKHMKSKREGWIALKLDMAKAYDRVEWSFVDKIFEKLGFNEKWRHMIYQCVSTVSF 760
            + H M++ +S + G+ A KLDM+KAYDRVEWSF+  +  KLGF+  W ++I +CVSTV++
Sbjct: 812  MTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTY 871

Query: 761  KVMLNGSPLEKFTPERGIRQGDPISPYLFILVSEALSRMVAKAEQEERVHGVKIKRHSPA 940
            ++ +NG   E F+P RG+RQGDP+SPYLF+L +E  S +++K E+E R+HG++I + +P+
Sbjct: 872  RIRVNGELSESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPS 931

Query: 941  LTHLLYADDLILFTKAN 991
            ++HLL+ADD ++  +AN
Sbjct: 932  VSHLLFADDSLILCRAN 948


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  285 bits (730), Expect = 9e-75
 Identities = 146/321 (45%), Positives = 202/321 (62%), Gaps = 4/321 (1%)
 Frame = +2

Query: 41   GDWQEGRTEVGTSLNQYFKEIFTSDQP---EINEDILNLFQPCVTPTENDRLTAIPTSEE 211
            G W E   ++      YF  IFTS  P   ++N D+L    P VT   N  L    + EE
Sbjct: 378  GTWCEEVDDIECVFTDYFTSIFTSTNPSDVQLN-DVLCCVDPVVTEECNTWLLKPFSKEE 436

Query: 212  IWAVVKKMGSLKSPGPDGFQGIFYQKCWDTIGPTVVDFVQDFFNLGSLNPE-VNETFITL 388
            ++  + +M   K+PGPDG   IFYQK W  IG  V  FV    + GS++P  +N T I L
Sbjct: 437  LYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQFVSSILH-GSISPSCINHTNIAL 495

Query: 389  IPKVANPDHASKFRPISLCNFGYKIISKILANRLKGLINNIISPFQGAFIKGRSIGDNVG 568
            IPKV NP   ++FRPI+LCN  YK++SK L  RLK  +  ++S  Q AF+ GR I DN  
Sbjct: 496  IPKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNAL 555

Query: 569  LACEVFHNMKHMKSKREGWIALKLDMAKAYDRVEWSFVDKIFEKLGFNEKWRHMIYQCVS 748
            +A EVFH+MKH    R+G IA+KLDM+KAYDRVEW F+ K+   +GF+ +W ++I  CVS
Sbjct: 556  IAMEVFHSMKHRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVS 615

Query: 749  TVSFKVMLNGSPLEKFTPERGIRQGDPISPYLFILVSEALSRMVAKAEQEERVHGVKIKR 928
            +VS+  ++NG      TP RG+R GDP+SPYLFIL+++A S+M+ K  QE+++HG K  R
Sbjct: 616  SVSYSFIINGGVCGSVTPARGLRHGDPLSPYLFILIADAFSKMIQKKVQEKQLHGAKASR 675

Query: 929  HSPALTHLLYADDLILFTKAN 991
              P ++HL +AD  +LFT+A+
Sbjct: 676  SGPVISHLFFADVSLLFTRAS 696


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  285 bits (729), Expect = 1e-74
 Identities = 141/319 (44%), Positives = 204/319 (63%), Gaps = 2/319 (0%)
 Frame = +2

Query: 41   GDWQEGRTEVGTSLNQYFKEIFTSDQPE--INEDILNLFQPCVTPTENDRLTAIPTSEEI 214
            G W+E    +      YF  IFTS  P     E ++++ +P VT   N +L    + +EI
Sbjct: 378  GTWREEADHIENIFTSYFSSIFTSSNPSDLSLEAVMSVIEPVVTEEHNLKLLEPFSKDEI 437

Query: 215  WAVVKKMGSLKSPGPDGFQGIFYQKCWDTIGPTVVDFVQDFFNLGSLNPEVNETFITLIP 394
             A +++M   K+PGPDG   IFYQ+ W  +G  V  F+ +  +  S    VN T I LIP
Sbjct: 438  LAALQQMHPCKAPGPDGMHVIFYQRFWHIVGDDVTSFISNILHGHSSPSCVNNTNIALIP 497

Query: 395  KVANPDHASKFRPISLCNFGYKIISKILANRLKGLINNIISPFQGAFIKGRSIGDNVGLA 574
            KV NP  A++FRPI+LCN  YK++SK +  RLK  +  IIS  Q AF+ GR I DN  +A
Sbjct: 498  KVKNPTKAAEFRPIALCNVLYKLMSKAIVMRLKSFLPEIISENQSAFVPGRLITDNALIA 557

Query: 575  CEVFHNMKHMKSKREGWIALKLDMAKAYDRVEWSFVDKIFEKLGFNEKWRHMIYQCVSTV 754
             EVFH+MK+    R+G IA+KLDM+KAYDRVEW F+ K+   +GF+ +W ++I + VS+V
Sbjct: 558  MEVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMEFVSSV 617

Query: 755  SFKVMLNGSPLEKFTPERGIRQGDPISPYLFILVSEALSRMVAKAEQEERVHGVKIKRHS 934
            ++  ++NGS      P RG+RQGDP+SPYLFI+V++A S+M+ +  Q++++HG K  R  
Sbjct: 618  TYSFIINGSVCGSVVPARGLRQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSG 677

Query: 935  PALTHLLYADDLILFTKAN 991
            P ++HL +ADD +LFT+AN
Sbjct: 678  PEISHLFFADDSLLFTRAN 696


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  283 bits (724), Expect = 5e-74
 Identities = 145/318 (45%), Positives = 201/318 (63%), Gaps = 2/318 (0%)
 Frame = +2

Query: 41   GDWQEGRTEVGTSLNQYFKEIFTSDQPEINE--DILNLFQPCVTPTENDRLTAIPTSEEI 214
            G WQ    E+   + +YF+EIFTS +P  N+  ++L   +  VT   ND L    + EEI
Sbjct: 381  GRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHVKRSVTQEYNDILLKPYSKEEI 440

Query: 215  WAVVKKMGSLKSPGPDGFQGIFYQKCWDTIGPTVVDFVQDFFNLGSLNPEVNETFITLIP 394
            +A +  M   K+PGPDG   IFYQ+ W  IG  V +FV    +  S    VN T I LIP
Sbjct: 441  FAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFVSSILHNYSCPGNVNCTNIALIP 500

Query: 395  KVANPDHASKFRPISLCNFGYKIISKILANRLKGLINNIISPFQGAFIKGRSIGDNVGLA 574
            KV +P   S+FRPISLCN  YKI SK +  RLK  +  I +  Q AF+ GR I DN  +A
Sbjct: 501  KVKSPTVVSEFRPISLCNVLYKIASKAIVLRLKRFLPCIATENQSAFVPGRLISDNSLIA 560

Query: 575  CEVFHNMKHMKSKREGWIALKLDMAKAYDRVEWSFVDKIFEKLGFNEKWRHMIYQCVSTV 754
             E+FH MK   + R+G +A+KLDM+KAYDRVEW F+ K+   +GF+ +W +++  CV+TV
Sbjct: 561  LEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSCVATV 620

Query: 755  SFKVMLNGSPLEKFTPERGIRQGDPISPYLFILVSEALSRMVAKAEQEERVHGVKIKRHS 934
            S+  ++NG      TP RG+RQGDP+SP+LFILV++A S+MV +    + +HG K  R+ 
Sbjct: 621  SYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSKEIHGAKASRNG 680

Query: 935  PALTHLLYADDLILFTKA 988
            P ++HLL+ADD +LFT+A
Sbjct: 681  PEISHLLFADDSLLFTRA 698


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  281 bits (720), Expect = 1e-73
 Identities = 138/322 (42%), Positives = 201/322 (62%)
 Frame = +2

Query: 41   GDWQEGRTEVGTSLNQYFKEIFTSDQPEINEDILNLFQPCVTPTENDRLTAIPTSEEIWA 220
            G W     ++      YF+ +FT+  P++ ++ L   Q  +T   ND LTA  T  E+ A
Sbjct: 160  GIWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRA 219

Query: 221  VVKKMGSLKSPGPDGFQGIFYQKCWDTIGPTVVDFVQDFFNLGSLNPEVNETFITLIPKV 400
             +  +   K+PGPDG   +F+QK W  I   ++  V  F   G  +  +N T I LIPK 
Sbjct: 220  ALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKT 279

Query: 401  ANPDHASKFRPISLCNFGYKIISKILANRLKGLINNIISPFQGAFIKGRSIGDNVGLACE 580
              P   ++ RPISLCN GYK+ISKIL  RLK ++ N+IS  Q AF+ GR I DN+ +A E
Sbjct: 280  ERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQE 339

Query: 581  VFHNMKHMKSKREGWIALKLDMAKAYDRVEWSFVDKIFEKLGFNEKWRHMIYQCVSTVSF 760
            +FH ++   S ++ ++A+K DM+KAYD+VEW+F++ +  K+GF EKW   I  C++TV +
Sbjct: 340  MFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQY 399

Query: 761  KVMLNGSPLEKFTPERGIRQGDPISPYLFILVSEALSRMVAKAEQEERVHGVKIKRHSPA 940
            KV++NG P     PERG+RQGDP+SPYLFIL +E L   + KAE++  + G+K+   SPA
Sbjct: 400  KVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPA 459

Query: 941  LTHLLYADDLILFTKANVVESG 1006
            ++HLL+ADD + F KAN  + G
Sbjct: 460  VSHLLFADDSLFFCKANKEQCG 481