BLASTX nr result

ID: Coptis25_contig00002078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002078
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242724.1| uncharacterized protein LOC100801744 [Glycin...   109   2e-22
ref|XP_002530011.1| vesicle transport V-snare protein vti1a, put...   109   2e-22
emb|CBI15188.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vit...   107   1e-21
ref|XP_002306052.1| predicted protein [Populus trichocarpa] gi|1...   105   4e-21

>ref|NP_001242724.1| uncharacterized protein LOC100801744 [Glycine max]
           gi|255637005|gb|ACU18835.1| unknown [Glycine max]
          Length = 174

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/60 (88%), Positives = 58/60 (96%)
 Frame = +1

Query: 139 MSEVFEGYERQYCEISANLSRKCTAASRLDGEQKKQKVSDVKAGLEDAETLIRKMDLEAR 318
           MSEVFEGYERQYCE SANLSR+CTAAS LDGEQKKQK+SD+KAGL+DA+TLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCEQSANLSRQCTAASALDGEQKKQKLSDIKAGLDDADTLIRKMDLEAR 60


>ref|XP_002530011.1| vesicle transport V-snare protein vti1a, putative [Ricinus
           communis] gi|223530490|gb|EEF32373.1| vesicle transport
           V-snare protein vti1a, putative [Ricinus communis]
          Length = 220

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/60 (88%), Positives = 57/60 (95%)
 Frame = +1

Query: 139 MSEVFEGYERQYCEISANLSRKCTAASRLDGEQKKQKVSDVKAGLEDAETLIRKMDLEAR 318
           MSEVFEGYERQYCE+SANLSRKCT A  LDGEQKKQK+S+VKAGLEDAE+LIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTTAGALDGEQKKQKLSEVKAGLEDAESLIRKMDLEAR 60


>emb|CBI15188.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/60 (85%), Positives = 58/60 (96%)
 Frame = +1

Query: 139 MSEVFEGYERQYCEISANLSRKCTAASRLDGEQKKQKVSDVKAGLEDAETLIRKMDLEAR 318
           MS+VFEGYERQYCE+SANLSRKCTAAS L+GEQKKQKVS++KAGL+DA+ LIRKMDLEAR
Sbjct: 59  MSQVFEGYERQYCELSANLSRKCTAASLLNGEQKKQKVSEIKAGLDDADALIRKMDLEAR 118


>ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vitis vinifera]
          Length = 221

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/60 (85%), Positives = 58/60 (96%)
 Frame = +1

Query: 139 MSEVFEGYERQYCEISANLSRKCTAASRLDGEQKKQKVSDVKAGLEDAETLIRKMDLEAR 318
           MS+VFEGYERQYCE+SANLSRKCTAAS L+GEQKKQKVS++KAGL+DA+ LIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLSRKCTAASLLNGEQKKQKVSEIKAGLDDADALIRKMDLEAR 60


>ref|XP_002306052.1| predicted protein [Populus trichocarpa] gi|118481869|gb|ABK92871.1|
           unknown [Populus trichocarpa]
           gi|222849016|gb|EEE86563.1| predicted protein [Populus
           trichocarpa]
          Length = 220

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = +1

Query: 139 MSEVFEGYERQYCEISANLSRKCTAASRLDGEQKKQKVSDVKAGLEDAETLIRKMDLEAR 318
           M+++FEGYERQYCE+S+NLSRKCTAA  LDGE+KKQK+S+VKAGLEDAE LIRKMDLEAR
Sbjct: 1   MTDIFEGYERQYCELSSNLSRKCTAALSLDGEKKKQKISEVKAGLEDAEALIRKMDLEAR 60


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