BLASTX nr result

ID: Coptis25_contig00002074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002074
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635203.1| PREDICTED: uncharacterized protein LOC100853...    84   6e-14
ref|XP_003608674.1| hypothetical protein MTR_4g100570 [Medicago ...    79   2e-12
ref|XP_004152391.1| PREDICTED: uncharacterized protein LOC101222...    79   3e-12
ref|XP_003549926.1| PREDICTED: uncharacterized protein LOC100812...    78   3e-12
ref|XP_003525577.1| PREDICTED: uncharacterized protein LOC100779...    76   2e-11

>ref|XP_003635203.1| PREDICTED: uncharacterized protein LOC100853295 [Vitis vinifera]
           gi|296085701|emb|CBI29500.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 72/254 (28%), Positives = 98/254 (38%), Gaps = 17/254 (6%)
 Frame = +1

Query: 124 MSSSTKSQKPLHNFSLPYLKWGN---NQXXXXXXXXXXXXXXXXXXXXXXXXXXDDGSDK 294
           M+++    +PLHNF L +LKWG    N                           D GS  
Sbjct: 1   MATAPVKSQPLHNFPLSFLKWGKNQMNNHRCRKPVDALRESPPDGRKNESEPDSDGGSKN 60

Query: 295 KR-----------KVVKSTNLVIR---IPKPNNVKXXXXXXXXXXXXXXXXXXXSKPWNL 432
           +            +  +S + V     + K    +                    KPWNL
Sbjct: 61  ESDSENRKLPLGSRTARSRHAVASPSPVEKAQKNQALVEREGGEVDEGEGEESVQKPWNL 120

Query: 433 RPRKGVVKNNNEMSSNGVKSGGEIEEKLKESHVIEKKEQEQKMMAMPKSLRLRGLIXXXX 612
           RPRK V K+  E+        GE++E +      E +         PKSLRLRG      
Sbjct: 121 RPRKAVSKSPIEIGV--APKNGELQEAVPGVPHSENQ---------PKSLRLRGFAESHS 169

Query: 613 XXXXXXXXPKLFVTLLREEIEVDYFAWTGLXXXXXXXXXNRTVQKQMDNLSPGFWLPSTI 792
                    K +++L REEIE D F  TG           + VQKQ+DN+ PG WL   +
Sbjct: 170 SEKKEKR--KFWISLSREEIEEDIFVMTGSKPARRPKKRAKNVQKQLDNVFPGLWLVG-V 226

Query: 793 TADSYNVPEDPAKR 834
           T DSY +P+ PAKR
Sbjct: 227 TPDSYRLPDAPAKR 240


>ref|XP_003608674.1| hypothetical protein MTR_4g100570 [Medicago truncatula]
           gi|355509729|gb|AES90871.1| hypothetical protein
           MTR_4g100570 [Medicago truncatula]
          Length = 243

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
 Frame = +1

Query: 418 KPWNLRPRKGVVKNNN-EMSSNGVKS--GGEIEEKLKESHVIEKKEQEQKMMAMPKSLRL 588
           KPWNLRPRK ++     E+ + G ++  GGE++E +   +              PKSLRL
Sbjct: 117 KPWNLRPRKPMIPRGGFEIGAGGSRNNNGGELQEGVNGEN------------PAPKSLRL 164

Query: 589 RGLIXXXXXXXXXXXXPKLFVTLLREEIEVDYFAWTGLXXXXXXXXXNRTVQKQMDNLSP 768
           RG               K ++ L ++EIE D F  TG           + VQKQMDN+ P
Sbjct: 165 RGFADTNCGEKKEKR--KFWIALSKDEIEEDIFVMTGSRPNRRPRKRAKNVQKQMDNVFP 222

Query: 769 GFWLPSTITADSYNVPEDPAKR 834
           G WL   ITAD+Y V + P KR
Sbjct: 223 GLWLVG-ITADAYRVADTPTKR 243


>ref|XP_004152391.1| PREDICTED: uncharacterized protein LOC101222282 [Cucumis sativus]
           gi|449488652|ref|XP_004158130.1| PREDICTED:
           uncharacterized LOC101222282 [Cucumis sativus]
          Length = 246

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 51/139 (36%), Positives = 69/139 (49%)
 Frame = +1

Query: 418 KPWNLRPRKGVVKNNNEMSSNGVKSGGEIEEKLKESHVIEKKEQEQKMMAMPKSLRLRGL 597
           KPWNLRPRKG     +      +K+GG+++E +  +        +Q     PKSLRLRG 
Sbjct: 116 KPWNLRPRKGT----SLRGYGDLKNGGDLQE-MDGAVSSAAGASQQGENPQPKSLRLRGF 170

Query: 598 IXXXXXXXXXXXXPKLFVTLLREEIEVDYFAWTGLXXXXXXXXXNRTVQKQMDNLSPGFW 777
                         K ++ L R+EIE D F  TG           + VQKQ+D + PG W
Sbjct: 171 TESHRIEKKDKR--KFWIALSRDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDTVFPGLW 228

Query: 778 LPSTITADSYNVPEDPAKR 834
           L   +TADSY + + PAKR
Sbjct: 229 LVG-VTADSYRLADSPAKR 246


>ref|XP_003549926.1| PREDICTED: uncharacterized protein LOC100812835 [Glycine max]
          Length = 237

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 73/252 (28%), Positives = 96/252 (38%), Gaps = 20/252 (7%)
 Frame = +1

Query: 139 KSQKPLHNFSLPYLKWGNNQXXXXXXXXXXXXXXXXXXXXXXXXXXDDGSDKKRKVVKST 318
           KSQ PLHNF+LP+LKWG +                            D   +  ++   T
Sbjct: 11  KSQ-PLHNFALPFLKWGASGKNNTTTTAAHHHRFRRPSDHASEPDSSDPDSRPHRLGSRT 69

Query: 319 -----NLVIRIPKPNNVKXXXXXXXXXXXXXXXXXXXSKPWNLRPRK------------- 444
                +L ++ P P                        KPWNLRPRK             
Sbjct: 70  ARNRFSLPLKPPPP------PPPQLHEAEHDDADDAVQKPWNLRPRKPALLPKAALEIGT 123

Query: 445 GVVKNNNEMSSNGV--KSGGEIEEKLKESHVIEKKEQEQKMMAMPKSLRLRGLIXXXXXX 618
           G  +N++  ++NG     GG   +    +               PKSLRLRG        
Sbjct: 124 GPSRNHHHATNNGEFHDGGGGGGDNNNPA---------------PKSLRLRGF--SDTPC 166

Query: 619 XXXXXXPKLFVTLLREEIEVDYFAWTGLXXXXXXXXXNRTVQKQMDNLSPGFWLPSTITA 798
                  K ++ L REEIE D F  TG           + VQKQMD++ PG WL   ITA
Sbjct: 167 SVKKEKRKFWIALSREEIEEDIFVMTGSRPARRPRKRPKNVQKQMDSVFPGLWLVG-ITA 225

Query: 799 DSYNVPEDPAKR 834
           D+Y V + PAKR
Sbjct: 226 DAYRVADTPAKR 237


>ref|XP_003525577.1| PREDICTED: uncharacterized protein LOC100779063 [Glycine max]
          Length = 241

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 71/235 (30%), Positives = 86/235 (36%), Gaps = 3/235 (1%)
 Frame = +1

Query: 139 KSQKPLHNFSLPYLKWGNNQXXXXXXXXXXXXXXXXXXXXXXXXXXDDGSDKKRKVVKST 318
           KSQ PLHNF+LP+LKWG +                           D  S   R   ++ 
Sbjct: 17  KSQ-PLHNFALPFLKWGASGKNNTTNAAHHHRFRRPSDHASEPDSSDPDSRPHRLGSRTA 75

Query: 319 NLVIRIP-KPNNVKXXXXXXXXXXXXXXXXXXXSKPWNLRPRKGVVKNNNEMSSNGVKSG 495
                +P KP                        KPW LRPRK  +  N      G  +G
Sbjct: 76  RNRFSLPLKP----PPPPPPPQPPHDDDADDSVQKPWKLRPRKPALLPNKTALEIG--TG 129

Query: 496 GEIEEKLKESHVIEKKE--QEQKMMAMPKSLRLRGLIXXXXXXXXXXXXPKLFVTLLREE 669
                     H     E          PKSLRLRG               K ++ L REE
Sbjct: 130 PSRNHHHHHHHATNNGEFLDGGDNNPAPKSLRLRGFSDTQCSEKKEKR--KFWIALSREE 187

Query: 670 IEVDYFAWTGLXXXXXXXXXNRTVQKQMDNLSPGFWLPSTITADSYNVPEDPAKR 834
           IE D F  TG           + VQKQMD++ PG WL   ITAD+Y V + P KR
Sbjct: 188 IEEDIFVMTGSRPARRPRKRPKNVQKQMDSVFPGLWLVG-ITADAYRVADTPTKR 241


Top