BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002071
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   174   4e-41
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   172   1e-40
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   171   3e-40
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi...   162   2e-37
emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]   162   2e-37

>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  174 bits (440), Expect = 4e-41
 Identities = 91/212 (42%), Positives = 126/212 (59%)
 Frame = +3

Query: 3   LKPNLVTYNVLLHKLYEEGRFSDGEKIWARMEKKEIVPDIRSYNSKLRGLVNEGNTWKAV 182
           L+P+L+T+N LL+  Y  GRF DGEKIW RMEKK I+PDIRSYN+KL GLV+E    + +
Sbjct: 196 LEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSEKRMLEGI 255

Query: 183 KLVEDLKTKELKPDTYSYNALIKGYCKDGKMXXXXXXXXXXXXXXXXXXXXCKDGKMDGA 362
            LVE+++TK +KPD YS+NALIKG+                          C DGK+D A
Sbjct: 256 GLVEEMQTKGIKPDGYSFNALIKGF--------------------------CNDGKVDEA 289

Query: 363 KRVYEDLVKSDLGLNRWTYDAYLPFLCEKEDYDLALELCKKSMDNNCKIDGKLVQAVVDG 542
              Y  + ++D   ++ T+   +P  CEK  +D A ELCK+  +  C +D  L+Q  VDG
Sbjct: 290 TNWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDG 349

Query: 543 LVKNSKLEAAKRLVSLARLKSYAHSQVKMPSE 638
           LVK  K+  AK+LV L    SY    +K+P++
Sbjct: 350 LVKGGKVVEAKKLVQLGNSNSYRRYNLKIPTD 381


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  172 bits (436), Expect = 1e-40
 Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   LKPNLVTYNVLLHKLYEEGRFSDGEKIWARMEKKEIVPDIRSYNSKLRGLVN-EGNTWKA 179
           L+P+L+T+N LL++ Y  GRF DGEKIW RMEKK I+PDIRSYN+KL GLV+ E    + 
Sbjct: 196 LEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSSEKRMLEG 255

Query: 180 VKLVEDLKTKELKPDTYSYNALIKGYCKDGKMXXXXXXXXXXXXXXXXXXXXCKDGKMDG 359
           + LVE+++TK +KPD YS+NALIKG+C DGK+                          D 
Sbjct: 256 IGLVEEMQTKGIKPDGYSFNALIKGFCNDGKV--------------------------DE 289

Query: 360 AKRVYEDLVKSDLGLNRWTYDAYLPFLCEKEDYDLALELCKKSMDNNCKIDGKLVQAVVD 539
           A   Y  + ++D   ++ T+   +P  CEK  +D A ELCK+  +  C +D  L+Q  VD
Sbjct: 290 ATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVD 349

Query: 540 GLVKNSKLEAAKRLVSLARLKSYAHSQVKMPSE 638
           GLVK  K+  AK+LV L    SY    +K+P++
Sbjct: 350 GLVKGGKVVEAKKLVQLGNSNSYRRYNLKIPTD 382


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score =  171 bits (432), Expect = 3e-40
 Identities = 91/213 (42%), Positives = 126/213 (59%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   LKPNLVTYNVLLHKLYEEGRFSDGEKIWARMEKKEIVPDIRSYNSKLRGLVN-EGNTWKA 179
           L+P+L+T+N LL+  Y  GRF DGEKIW RMEKK I+PDIRSYN+KL GLV+ E    + 
Sbjct: 196 LEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSSEKRMLEG 255

Query: 180 VKLVEDLKTKELKPDTYSYNALIKGYCKDGKMXXXXXXXXXXXXXXXXXXXXCKDGKMDG 359
           + LVE+++TK +KPD YS+NALIKG+C DGK+                          D 
Sbjct: 256 IGLVEEMQTKGIKPDGYSFNALIKGFCNDGKV--------------------------DE 289

Query: 360 AKRVYEDLVKSDLGLNRWTYDAYLPFLCEKEDYDLALELCKKSMDNNCKIDGKLVQAVVD 539
           A   Y  + ++D   ++ T+   +P  CEK  +D A ELCK+  +  C +D  L+Q  VD
Sbjct: 290 ATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVD 349

Query: 540 GLVKNSKLEAAKRLVSLARLKSYAHSQVKMPSE 638
           GLVK  K+  AK+LV L    SY    +K+P++
Sbjct: 350 GLVKGGKVVEAKKLVQLGNSNSYRRYNLKIPTD 382


>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13150-like [Vitis vinifera]
          Length = 379

 Score =  162 bits (409), Expect = 2e-37
 Identities = 81/212 (38%), Positives = 131/212 (61%)
 Frame = +3

Query: 3   LKPNLVTYNVLLHKLYEEGRFSDGEKIWARMEKKEIVPDIRSYNSKLRGLVNEGNTWKAV 182
           L+P+L+T+N LL+  Y+ G ++DGEKIW  M+K  + P++RSYN+KLRG+++E    +AV
Sbjct: 194 LEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAV 253

Query: 183 KLVEDLKTKELKPDTYSYNALIKGYCKDGKMXXXXXXXXXXXXXXXXXXXXCKDGKMDGA 362
           +L++++KT  +KPD ++ N+L+KG+                          C  G ++ A
Sbjct: 254 ELIDEMKTSGIKPDVFTLNSLMKGF--------------------------CNAGNLEEA 287

Query: 363 KRVYEDLVKSDLGLNRWTYDAYLPFLCEKEDYDLALELCKKSMDNNCKIDGKLVQAVVDG 542
           KR Y ++ +++L   R TY   +PFL EK D+D+A ELCK+       I+  L+Q V++G
Sbjct: 288 KRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEG 347

Query: 543 LVKNSKLEAAKRLVSLARLKSYAHSQVKMPSE 638
           LVK SK+E A  LV LA+LK +    +++PS+
Sbjct: 348 LVKESKIEEATELVELAKLKKF-RITLELPSD 378


>emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
          Length = 340

 Score =  162 bits (409), Expect = 2e-37
 Identities = 81/212 (38%), Positives = 131/212 (61%)
 Frame = +3

Query: 3   LKPNLVTYNVLLHKLYEEGRFSDGEKIWARMEKKEIVPDIRSYNSKLRGLVNEGNTWKAV 182
           L+P+L+T+N LL+  Y+ G ++DGEKIW  M+K  + P++RSYN+KLRG+++E    +AV
Sbjct: 155 LEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAV 214

Query: 183 KLVEDLKTKELKPDTYSYNALIKGYCKDGKMXXXXXXXXXXXXXXXXXXXXCKDGKMDGA 362
           +L++++KT  +KPD ++ N+L+KG+                          C  G ++ A
Sbjct: 215 ELIDEMKTSGIKPDVFTLNSLMKGF--------------------------CNAGNLEEA 248

Query: 363 KRVYEDLVKSDLGLNRWTYDAYLPFLCEKEDYDLALELCKKSMDNNCKIDGKLVQAVVDG 542
           KR Y ++ +++L   R TY   +PFL EK D+D+A ELCK+       I+  L+Q V++G
Sbjct: 249 KRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEG 308

Query: 543 LVKNSKLEAAKRLVSLARLKSYAHSQVKMPSE 638
           LVK SK+E A  LV LA+LK +    +++PS+
Sbjct: 309 LVKESKIEEATELVELAKLKKF-RITLELPSD 339