BLASTX nr result

ID: Coptis25_contig00002070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002070
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512885.1| conserved hypothetical protein [Ricinus comm...   117   4e-24
ref|XP_002264458.1| PREDICTED: uncharacterized protein LOC100264...   107   4e-21
ref|XP_002300133.1| predicted protein [Populus trichocarpa] gi|2...   106   7e-21
ref|XP_004140549.1| PREDICTED: uncharacterized protein LOC101220...   105   9e-21
gb|AFK38053.1| unknown [Lotus japonicus]                              100   5e-19

>ref|XP_002512885.1| conserved hypothetical protein [Ricinus communis]
           gi|223547896|gb|EEF49388.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 81

 Score =  117 bits (292), Expect = 4e-24
 Identities = 59/81 (72%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = +1

Query: 220 IIGAFRGSRVMEIVKKNDSGGLLWKRIKLTTTRKANAKKRLLRVWQNEAVLKALAGPPPP 399
           ++GAF G+RVMEIVKK+DSGGL+WKRIKLTTTRKANAKKRLLRVWQNEAVLKA A PPP 
Sbjct: 1   MLGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACAEPPPS 60

Query: 400 KDTASGDAT-MADKESVISQS 459
           K +A  DAT +A+K+ + +Q+
Sbjct: 61  KTSALSDATGVAEKDGLSTQT 81


>ref|XP_002264458.1| PREDICTED: uncharacterized protein LOC100264285 [Vitis vinifera]
          Length = 75

 Score =  107 bits (266), Expect = 4e-21
 Identities = 52/64 (81%), Positives = 57/64 (89%)
 Frame = +1

Query: 226 GAFRGSRVMEIVKKNDSGGLLWKRIKLTTTRKANAKKRLLRVWQNEAVLKALAGPPPPKD 405
           GAF G+RVMEIVKK+DSGGL+WKRIKLTTTRKANAKKRLLRVWQNEAVLK  + PPP K 
Sbjct: 3   GAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKVCSEPPPSKT 62

Query: 406 TASG 417
           +A G
Sbjct: 63  SAPG 66


>ref|XP_002300133.1| predicted protein [Populus trichocarpa] gi|222847391|gb|EEE84938.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score =  106 bits (264), Expect = 7e-21
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 226 GAFRGSRVMEIVKKNDSGGLLWKRIKLTTTRKANAKKRLLRVWQNEAVLKALAGPPPPKD 405
           GAF G+RVMEIVKK+DSGGL+WKRIKLTTTRKANAKKRLLRVWQNEAVLKA +   P K 
Sbjct: 5   GAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSQSQPSKM 64

Query: 406 TASGDATMADKESVISQS 459
           +A+G + + +KE + + S
Sbjct: 65  SAAGASGVDEKEGLNTAS 82


>ref|XP_004140549.1| PREDICTED: uncharacterized protein LOC101220585 [Cucumis sativus]
           gi|449519856|ref|XP_004166950.1| PREDICTED:
           uncharacterized protein LOC101231766 [Cucumis sativus]
          Length = 74

 Score =  105 bits (263), Expect = 9e-21
 Identities = 53/65 (81%), Positives = 59/65 (90%)
 Frame = +1

Query: 226 GAFRGSRVMEIVKKNDSGGLLWKRIKLTTTRKANAKKRLLRVWQNEAVLKALAGPPPPKD 405
           GAF G+RV+EIVKK+DSGGL+WKRIKLTTTRKANAKKRL RVWQNEAVLKA + PPPPK 
Sbjct: 3   GAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPPK- 61

Query: 406 TASGD 420
            +SGD
Sbjct: 62  -SSGD 65


>gb|AFK38053.1| unknown [Lotus japonicus]
          Length = 78

 Score =  100 bits (248), Expect = 5e-19
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = +1

Query: 226 GAFRGSRVMEIVKKNDSGGLLWKRIKLTTTRKANAKKRLLRVWQNEAVLKALAGPPP 396
           GAF G+RVMEIVKK DSGGL+WKRIKLTTTRKANAKKRLLRVWQNEAVLKA +  PP
Sbjct: 3   GAFWGTRVMEIVKKRDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKATSQSPP 59


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