BLASTX nr result
ID: Coptis25_contig00002068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002068
(1224 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27895.3| unnamed protein product [Vitis vinifera] 145 2e-32
ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containin... 136 9e-30
sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-con... 131 4e-28
gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japo... 131 4e-28
gb|EEC70929.1| hypothetical protein OsI_02512 [Oryza sativa Indi... 130 5e-28
>emb|CBI27895.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 145 bits (367), Expect = 2e-32
Identities = 101/303 (33%), Positives = 143/303 (47%), Gaps = 21/303 (6%)
Frame = -3
Query: 1066 AEQDKMSGVKRLKLHTISKPIQVKYCKHYLKGSCHQGDSCKYSHDI----KKPEFCKYFL 899
AE++K GVKRL+L +SKP V YC+HYLKG CH+GD C++SHD K C +
Sbjct: 209 AEKNKELGVKRLRLLPVSKPKTVTYCRHYLKGRCHEGDHCRFSHDTIPLTKSSPCCHFAR 268
Query: 898 NNCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXAKQKAELQ 719
C+KG DCP+DH S YPC+ Y S+GFC RG C FSHK+PL +
Sbjct: 269 GTCMKGDDCPFDHQLSNYPCNNYVSKGFCSRGDDCLFSHKMPLKESSPTAVNVCKPVSEP 328
Query: 718 GSAILGRQPNKGSTSKESLNMSKNMTRDTPA-SFGTIRHQGQN----TVDLKPPAQAPKG 554
S P+K + K +N + + ++ + S G + LKPP QA +G
Sbjct: 329 PSL-----PSKSYSKKLDMNGTSHQNGNSLSHSVGIFPQSNMEKKVAEIVLKPPEQASRG 383
Query: 553 ISFLMFGN---DSSKQPDGQCQSPPVGDDVASTCFKNQGVSERLYSSNKTS-----GRMS 398
I+ L FG D S + SP + + V KNQG + + K + R
Sbjct: 384 INSLSFGKSPMDYSGKLKQIGSSPTMDEGVEVDKQKNQGEVQNMNEKAKRTPVTVPPRGI 443
Query: 397 SILPVGQSSSMISDGKDKNLHSSAQKAQPSTSY----ESKKNDQSAPSTASNGNIPTISS 230
+ L G++ ++D K L S + +S K Q S+A +GNI S
Sbjct: 444 NFLSFGKAP--LNDSSVKELAGSPSNREDGNKILPLGDSNKYKQVGSSSARDGNINVSSQ 501
Query: 229 ILQ 221
+ Q
Sbjct: 502 LNQ 504
>ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containing protein 7-like
[Brachypodium distachyon]
Length = 685
Score = 136 bits (343), Expect = 9e-30
Identities = 101/301 (33%), Positives = 134/301 (44%), Gaps = 15/301 (4%)
Frame = -3
Query: 1066 AEQDKMSGVKRLKLHTISKPIQVKYCKHYLKGSCHQGDSCKYSHD---IKKPEFCKYFLN 896
A Q + GVKRLKL I KP V+YC YL G C QG+ CK+SHD + K + C +F
Sbjct: 408 ALQREADGVKRLKLAPIIKPKVVRYCHFYLHGKCQQGNVCKFSHDTTPLTKSKPCTHFAR 467
Query: 895 -NCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXAKQKAELQ 719
+CLKG DCPYDH+ SKYPCH + G C+RG C+FSH P K A L
Sbjct: 468 GSCLKGDDCPYDHELSKYPCHNFLGNGMCLRGDKCKFSHVAPTADDSSTKDAKKSDASLV 527
Query: 718 GSAILGRQPN---KGSTSKESLNMSKNMTR--DTPASFGTIRHQGQNTVDLKPPAQAPKG 554
+ ++ N K ST + ++ T+ + G+I Q K A PKG
Sbjct: 528 SEKLTSKEQNSSQKISTVHDGEPVASAPTKHYSILKTLGSISKNAQ-----KASAHMPKG 582
Query: 553 ISFLMFGNDSSKQPDGQCQSPPVGDDVASTCFKNQGVSERLYSSNKTSGRMSSILPVGQS 374
+ FL F S +PP G+ V + N R S ++
Sbjct: 583 VQFLAFSKGRSDSSILHQDAPPPGNFVGPQAAEG--------DKNAQPNRHRSAARSNEN 634
Query: 373 SSMISDGKDKNLHSSAQKAQPSTSYESKKNDQSAPSTASNGNIPT------ISSILQDFL 212
SS K+ + H + E KK SA S A G++ T S ILQ+FL
Sbjct: 635 SS-----KEASSHPIS---------EQKKTSLSADSIAVLGSVSTQHEVSEASRILQEFL 680
Query: 211 F 209
F
Sbjct: 681 F 681
>sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 7;
Short=OsC3H7 gi|52076312|dbj|BAD45097.1| zinc finger
(CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 131 bits (329), Expect = 4e-28
Identities = 104/312 (33%), Positives = 144/312 (46%), Gaps = 26/312 (8%)
Frame = -3
Query: 1066 AEQDKMSGVKRLKLHTISKPIQVKYCKHYLKGSCHQGDSCKYSHD---IKKPEFCKYFLN 896
A Q + GVKRLKL + KP VK C YL G C QG+ CK+SHD + K + C ++
Sbjct: 410 ALQREAEGVKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHYAR 469
Query: 895 -NCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXAKQKAELQ 719
+CLKG DCPYDH+ SKYPCH + G C+RG C+FSH +P K A
Sbjct: 470 GSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNA--- 526
Query: 718 GSAILGRQPNKGSTSKE-SLNMSKNMTRDTPASFGTIRHQG--QNTVDL-----KPPAQA 563
P K + ++ S + + PA+ I+H +N + K P +
Sbjct: 527 -----SSVPEKANCQEQTSRQKTSTVYSGEPATSVPIKHHSILKNLAGISGNAQKVPVRI 581
Query: 562 PKGISFLMFGNDSSKQPDGQCQSPPVGDDVAST-CFKN------QGVSERLYSSNKTSGR 404
P+GI FL F + +PD S + DV ST KN Q + K G+
Sbjct: 582 PRGIQFLPF---NKARPD----SSILHQDVVSTEKHKNPTGGPHQNFGRPQPADGKKLGK 634
Query: 403 MSSILPVGQSSSMISDGKDKNLHSSAQKAQPSTSYESKKNDQSAPSTA-------SNGNI 245
+ G S+ + D KD S+++A E KKN S P+TA + +
Sbjct: 635 HN-----GHRSAPLLDEKD-----SSKQANLHPCSEPKKN--SLPTTAAVPSSVSTQHEV 682
Query: 244 PTISSILQDFLF 209
S ILQ+FLF
Sbjct: 683 SEASRILQEFLF 694
>gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japonica Group]
Length = 698
Score = 131 bits (329), Expect = 4e-28
Identities = 104/312 (33%), Positives = 144/312 (46%), Gaps = 26/312 (8%)
Frame = -3
Query: 1066 AEQDKMSGVKRLKLHTISKPIQVKYCKHYLKGSCHQGDSCKYSHD---IKKPEFCKYFLN 896
A Q + GVKRLKL + KP VK C YL G C QG+ CK+SHD + K + C ++
Sbjct: 410 ALQREAEGVKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHYAR 469
Query: 895 -NCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXAKQKAELQ 719
+CLKG DCPYDH+ SKYPCH + G C+RG C+FSH +P K A
Sbjct: 470 GSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNA--- 526
Query: 718 GSAILGRQPNKGSTSKE-SLNMSKNMTRDTPASFGTIRHQG--QNTVDL-----KPPAQA 563
P K + ++ S + + PA+ I+H +N + K P +
Sbjct: 527 -----SSVPEKANCQEQTSRQKTSTVYSGEPATSVPIKHHSILKNLAGISGNAQKVPVRI 581
Query: 562 PKGISFLMFGNDSSKQPDGQCQSPPVGDDVAST-CFKN------QGVSERLYSSNKTSGR 404
P+GI FL F + +PD S + DV ST KN Q + K G+
Sbjct: 582 PRGIQFLPF---NKARPD----SSILHQDVVSTEKHKNPTGGPHQNFGRPQPADGKKLGK 634
Query: 403 MSSILPVGQSSSMISDGKDKNLHSSAQKAQPSTSYESKKNDQSAPSTA-------SNGNI 245
+ G S+ + D KD S+++A E KKN S P+TA + +
Sbjct: 635 HN-----GHRSAPLLDEKD-----SSKQANLHPCSEPKKN--SLPTTAAVPSSVSTQHEV 682
Query: 244 PTISSILQDFLF 209
S ILQ+FLF
Sbjct: 683 SEASRILQEFLF 694
>gb|EEC70929.1| hypothetical protein OsI_02512 [Oryza sativa Indica Group]
Length = 698
Score = 130 bits (328), Expect = 5e-28
Identities = 104/312 (33%), Positives = 144/312 (46%), Gaps = 26/312 (8%)
Frame = -3
Query: 1066 AEQDKMSGVKRLKLHTISKPIQVKYCKHYLKGSCHQGDSCKYSHD---IKKPEFCKYFLN 896
A Q + GVKRLKL + KP VK C YL G C QG+ CK+SHD + K + C ++
Sbjct: 410 ALQREAEGVKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHYAR 469
Query: 895 -NCLKGADCPYDHDPSKYPCHKYQSEGFCVRGAACQFSHKVPLXXXXXXXXXAKQKAELQ 719
+CLKG DCPYDH+ SKYPCH + G C+RG C+FSH +P K A
Sbjct: 470 GSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNA--- 526
Query: 718 GSAILGRQPNKGSTSKE-SLNMSKNMTRDTPASFGTIRHQG--QNTVDL-----KPPAQA 563
P K + ++ S + + PA+ I+H +N + K P +
Sbjct: 527 -----SSVPEKANCQEQTSRQKTSTVYSGEPATSVPIKHHSILKNLAGISGNAQKVPIRI 581
Query: 562 PKGISFLMFGNDSSKQPDGQCQSPPVGDDVAST-CFKN------QGVSERLYSSNKTSGR 404
P+GI FL F + +PD S + DV ST KN Q + K G+
Sbjct: 582 PRGIQFLPF---NKARPD----SSILHQDVVSTEKHKNPTGGPHQNFGRPQPADGKKLGK 634
Query: 403 MSSILPVGQSSSMISDGKDKNLHSSAQKAQPSTSYESKKNDQSAPSTA-------SNGNI 245
+ G S+ + D KD S+++A E KKN S P+TA + +
Sbjct: 635 HN-----GHRSAPLLDEKD-----SSKQANLHPCSEPKKN--SLPTTAAVPSSVSTQHEV 682
Query: 244 PTISSILQDFLF 209
S ILQ+FLF
Sbjct: 683 SEASRILQEFLF 694