BLASTX nr result

ID: Coptis25_contig00002055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002055
         (1533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36644.1| C2H2L domain class transcription factor [Malus x ...   538   e-150
ref|XP_002527963.1| transcription factor, putative [Ricinus comm...   526   e-147
gb|AFK41799.1| unknown [Lotus japonicus]                              517   e-144
ref|XP_002282746.1| PREDICTED: zinc finger protein 622 [Vitis vi...   516   e-144
gb|AFK42392.1| unknown [Lotus japonicus]                              516   e-144

>gb|ADL36644.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 405

 Score =  538 bits (1386), Expect = e-150
 Identities = 276/409 (67%), Positives = 315/409 (77%), Gaps = 9/409 (2%)
 Frame = -2

Query: 1454 MPVFTCNSCNSEFEDDIQQKLHYQSEWHRYNLKRKVAGVPGVTEALFNARQSALAQEQTK 1275
            M   TCNSCN EF DD +QKLHY+SEWHRYNLKRK+AGVPGVTEALF ARQ+ALAQE+  
Sbjct: 1    MSGLTCNSCNKEFLDDSEQKLHYKSEWHRYNLKRKIAGVPGVTEALFIARQAALAQEKNS 60

Query: 1274 LTETPMLYSCELCNKGYRSSKAHAQHLQSRSHILRASNGA-QTVGATVIKPFPRRT---- 1110
            L+ETPMLYSC LC KGYRSSKAHA+HL+SRSHILRAS GA +     +I+P P R     
Sbjct: 61   LSETPMLYSCGLCGKGYRSSKAHAEHLKSRSHILRASQGASEQEEKAIIRPLPPRVVNKA 120

Query: 1109 -PIQXXXXXXXXXXXXXXXEVGPDGVLVDDATESITDLNMGEAGSDDEMDAD---EELDP 942
             P +               EV PD    +D  +S+TD+N+ E  S+++MD D   EELDP
Sbjct: 121  PPKREANDEETEESEDEWVEVDPD----EDLAKSLTDMNVDEHASEEDMDEDDDFEELDP 176

Query: 941  SCCFICDAKHRTVESCMVHMHKQHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDR 762
            +CCF+CD +H T+ESCMVHMHK HGFFIPD+EYLKDPKGLLTYLGLKVKRDFMCLYCNDR
Sbjct: 177  TCCFMCDLEHDTLESCMVHMHKHHGFFIPDIEYLKDPKGLLTYLGLKVKRDFMCLYCNDR 236

Query: 761  CLPFNSLEAVRKHMLAKSHCKVRXXXXXXXXXXXXXXXXXYSSSYVDAAGKQLVSSDDMT 582
              PFNSLEAVRKHM+AKSHCKV                  YSSSYVD AGKQLV S DM 
Sbjct: 237  RHPFNSLEAVRKHMVAKSHCKVHYGDDDDEEEAELEEFYDYSSSYVDEAGKQLVVSGDMA 296

Query: 581  NTVELGSGGSELVITRKNDIGTSIRTLGSREFLRYYRQKPRPSSTGGVALAAALASRYKS 402
            N+VELGSGGSEL+ITR++D G S +TLGSRE+LRYYRQK RPS   G A+ AALASRY+S
Sbjct: 297  NSVELGSGGSELIITRRSDDGISSKTLGSREYLRYYRQKLRPSPANGAAITAALASRYRS 356

Query: 401  MGLATVQSREQLVRLKVLREMNRSGVEVMRSKMGMKSNVIRNLPKNCTY 255
            MGLATVQS+E++VR+KVL+EM RSGVE MRSKMGMKSNVIRNLPKNCTY
Sbjct: 357  MGLATVQSKERMVRMKVLKEMRRSGVEAMRSKMGMKSNVIRNLPKNCTY 405


>ref|XP_002527963.1| transcription factor, putative [Ricinus communis]
            gi|223532589|gb|EEF34375.1| transcription factor,
            putative [Ricinus communis]
          Length = 407

 Score =  526 bits (1355), Expect = e-147
 Identities = 274/405 (67%), Positives = 306/405 (75%), Gaps = 9/405 (2%)
 Frame = -2

Query: 1442 TCNSCNSEFEDDIQQKLHYQSEWHRYNLKRKVAGVPGVTEALFNARQSALAQEQTKLTET 1263
            TCN+CN EF DD  QKLHY+S+WHRYNLKRKVAGVPGVTEALF ARQS L QE+ K +ET
Sbjct: 5    TCNACNKEFNDDADQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQSVLVQEKDKSSET 64

Query: 1262 PMLYSCELCNKGYRSSKAHAQHLQSRSHILRASNGA-QTVGATVIKPFPRRT-----PIQ 1101
            PMLYSC LC KGYRSSKAHAQHL+SRSHILRAS GA +     VIKP PRR      P +
Sbjct: 65   PMLYSCVLCGKGYRSSKAHAQHLKSRSHILRASQGANENEDTAVIKPLPRRIMNKRPPQR 124

Query: 1100 XXXXXXXXXXXXXXXEVGPDGVLVDDATESITDLNMGEAGSDDEMDA---DEELDPSCCF 930
                           EV P+  LV DA++S+T L++ E  SD++MD    DE LDPSCCF
Sbjct: 125  AVEDEESEDSGDEWEEVDPEEELVGDASKSLTGLSVNET-SDEDMDEGEDDELLDPSCCF 183

Query: 929  ICDAKHRTVESCMVHMHKQHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCLPF 750
            +CD +H  VESCMVHMHKQHGFFIPDVEYLKDPK LLTYLGLKVKRDFMCLYCNDRC PF
Sbjct: 184  MCDQQHGNVESCMVHMHKQHGFFIPDVEYLKDPKSLLTYLGLKVKRDFMCLYCNDRCHPF 243

Query: 749  NSLEAVRKHMLAKSHCKVRXXXXXXXXXXXXXXXXXYSSSYVDAAGKQLVSSDDMTNTVE 570
            NSLEAVRKHM AK HCKV                  YSSSYVD  GKQL+ S DM NTVE
Sbjct: 244  NSLEAVRKHMAAKGHCKVHYGDGDDEEEAELEEFYDYSSSYVDENGKQLIVSGDMANTVE 303

Query: 569  LGSGGSELVITRKNDIGTSIRTLGSREFLRYYRQKPRPSSTGGVALAAALASRYKSMGLA 390
            LG GGSEL+IT ++D   S +TLGSREFLRYYRQKPRPS   GVA+ AALASRY+SMGLA
Sbjct: 304  LGGGGSELIITTRSDSKISSKTLGSREFLRYYRQKPRPSPANGVAITAALASRYRSMGLA 363

Query: 389  TVQSREQLVRLKVLREMNRSGVEVMRSKMGMKSNVIRNLPKNCTY 255
            TVQSREQ+VR+KV++EMNRS  E MR+K+GMKSN+IRNLPKN  Y
Sbjct: 364  TVQSREQMVRMKVMKEMNRSS-EAMRTKIGMKSNIIRNLPKNVPY 407


>gb|AFK41799.1| unknown [Lotus japonicus]
          Length = 410

 Score =  517 bits (1331), Expect = e-144
 Identities = 266/412 (64%), Positives = 314/412 (76%), Gaps = 12/412 (2%)
 Frame = -2

Query: 1454 MPVFTCNSCNSEFEDDIQQKLHYQSEWHRYNLKRKVAGVPGVTEALFNARQSALAQEQTK 1275
            MP  TCN+CN+EF DD  QKLHY+SEWHRYNLKRKVAGVPGVTEALF ARQ+ALA+E+ K
Sbjct: 1    MPGLTCNACNTEFIDDADQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQAALAEEKDK 60

Query: 1274 LTETPMLYSCELCNKGYRSSKAHAQHLQSRSHILRASNG-AQTVGATVIKPFPRRT---- 1110
              ET MLYSC LC KGY+SSKAHA+HL+SR H++R S G +Q+    ++KP P+R+    
Sbjct: 61   ANETAMLYSCGLCGKGYKSSKAHAEHLKSRGHLMRVSEGTSQSDEKAIVKPLPQRSANRP 120

Query: 1109 -PIQXXXXXXXXXXXXXXXEVGPDGVLVDDATESITDLNMGE-AGSDDEMDAD-----EE 951
             P +               EV P+  LV DA +S+T++N+ E A +DD+MD D     EE
Sbjct: 121  PPRREVQVSEDGESEDEWEEVDPEDDLVGDAAKSLTEMNVDEDADNDDDMDEDDDDTFEE 180

Query: 950  LDPSCCFICDAKHRTVESCMVHMHKQHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYC 771
            LDP+CCF+CD  H T+E+CMVHMHK HGFFIPD+EYLKDPKGLLTYLGLKVKRD+MCLYC
Sbjct: 181  LDPACCFMCDQGHNTIENCMVHMHKHHGFFIPDIEYLKDPKGLLTYLGLKVKRDYMCLYC 240

Query: 770  NDRCLPFNSLEAVRKHMLAKSHCKVRXXXXXXXXXXXXXXXXXYSSSYVDAAGKQLVSSD 591
            NDRC PF+SLEAVRKHM+AKSHCKV                  YSSSY D  G+QLV S 
Sbjct: 241  NDRCYPFSSLEAVRKHMVAKSHCKVHFGDGDDEEEVELEDFYDYSSSYADEQGEQLVVSG 300

Query: 590  DMTNTVELGSGGSELVITRKNDIGTSIRTLGSREFLRYYRQKPRPSSTGGVALAAALASR 411
            D TN +EL  GGSELVI+RK+   TS RTLGSREFLRYYRQKPRP S   +A+ AALASR
Sbjct: 301  DTTNNIEL-FGGSELVISRKSGDKTSTRTLGSREFLRYYRQKPRP-SPANMAITAALASR 358

Query: 410  YKSMGLATVQSREQLVRLKVLREMNRSGVEVMRSKMGMKSNVIRNLPKNCTY 255
            Y+SMGLATVQSREQ+VR+KVL++M+++GVE MRSKMGMKSNVIRNLPKNCTY
Sbjct: 359  YRSMGLATVQSREQIVRMKVLKQMSKTGVENMRSKMGMKSNVIRNLPKNCTY 410


>ref|XP_002282746.1| PREDICTED: zinc finger protein 622 [Vitis vinifera]
          Length = 411

 Score =  516 bits (1330), Expect = e-144
 Identities = 264/411 (64%), Positives = 304/411 (73%), Gaps = 11/411 (2%)
 Frame = -2

Query: 1454 MPVFTCNSCNSEFEDDIQQKLHYQSEWHRYNLKRKVAGVPGVTEALFNARQSALAQEQTK 1275
            M   TCN+CN EF  +  QKLHY+S+WHRYNLKRK+AGVPGVTEAL+ ARQS+LA+E+ +
Sbjct: 1    MATLTCNACNKEFIGESDQKLHYKSDWHRYNLKRKIAGVPGVTEALYLARQSSLAEEKNR 60

Query: 1274 LTETPMLYSCELCNKGYRSSKAHAQHLQSRSHILRASNGA--QTVGATVIKPFPRRTPIQ 1101
            L ETPMLYSC LC KGYRSSKA  QHL+SRSHILRAS  A  Q    T+IKP   RT  +
Sbjct: 61   LNETPMLYSCSLCGKGYRSSKALGQHLKSRSHILRASQRASHQDEETTIIKPLTHRTANK 120

Query: 1100 XXXXXXXXXXXXXXXE--VGPDGVLVDDATESITDLNMGEAGSDDEMDADEE-------L 948
                              V PD  LV +ATESIT +N+ E  S+D+MD  ++       L
Sbjct: 121  PPPQREPVNEESEDEWEEVNPDEDLVGEATESITQMNVNEHASNDDMDESDDDDDFEIKL 180

Query: 947  DPSCCFICDAKHRTVESCMVHMHKQHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCN 768
            DP+CCF+CD +  T+E C+VHMHKQHGFFIPDVEYLKDPKGLLTYLGLKV RDFMCLYCN
Sbjct: 181  DPTCCFMCDQEQNTIERCIVHMHKQHGFFIPDVEYLKDPKGLLTYLGLKVTRDFMCLYCN 240

Query: 767  DRCLPFNSLEAVRKHMLAKSHCKVRXXXXXXXXXXXXXXXXXYSSSYVDAAGKQLVSSDD 588
            D C PFNSLEAVRKHM+AKSHCKV                  YSSSYVD   KQLV+S D
Sbjct: 241  DGCHPFNSLEAVRKHMVAKSHCKVHYGDGGDDEEAELEEFYDYSSSYVDVDEKQLVASGD 300

Query: 587  MTNTVELGSGGSELVITRKNDIGTSIRTLGSREFLRYYRQKPRPSSTGGVALAAALASRY 408
            M NTVELG GGSEL+ITR+ D G S ++LGSREFLRYYRQKPRPS   G A+ AALASRY
Sbjct: 301  MNNTVELGCGGSELIITRRTDGGISTKSLGSREFLRYYRQKPRPSPMNGAAITAALASRY 360

Query: 407  KSMGLATVQSREQLVRLKVLREMNRSGVEVMRSKMGMKSNVIRNLPKNCTY 255
            +SMGLATVQSREQ+VR+KV+++MN+SGVE MRSK+GMKSNVIRNLP N  Y
Sbjct: 361  RSMGLATVQSREQIVRMKVMKQMNKSGVEAMRSKIGMKSNVIRNLPNNVPY 411


>gb|AFK42392.1| unknown [Lotus japonicus]
          Length = 410

 Score =  516 bits (1329), Expect = e-144
 Identities = 266/412 (64%), Positives = 314/412 (76%), Gaps = 12/412 (2%)
 Frame = -2

Query: 1454 MPVFTCNSCNSEFEDDIQQKLHYQSEWHRYNLKRKVAGVPGVTEALFNARQSALAQEQTK 1275
            MP  TCN+CN+EF DD  QKLHY+SEWHRYNLKRKVAGVPGVTEALF ARQ+ALA+E+ K
Sbjct: 1    MPGLTCNACNTEFIDDADQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQAALAEEKDK 60

Query: 1274 LTETPMLYSCELCNKGYRSSKAHAQHLQSRSHILRASNG-AQTVGATVIKPFPRRT---- 1110
              ET MLYSC LC KGY+SSKAHA+HL+SR H++R S G +Q+    ++KP P+R+    
Sbjct: 61   ANETAMLYSCGLCGKGYKSSKAHAEHLKSRGHLMRVSEGTSQSDEKAIVKPLPQRSANRP 120

Query: 1109 -PIQXXXXXXXXXXXXXXXEVGPDGVLVDDATESITDLNMGE-AGSDDEMDAD-----EE 951
             P +               EV P+  LV DA +S+T++N+ E A +DD+MD D     EE
Sbjct: 121  PPRREVQVSEDGESEDEWEEVDPEDDLVGDAAKSLTEMNVDEDADNDDDMDEDDDDTFEE 180

Query: 950  LDPSCCFICDAKHRTVESCMVHMHKQHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYC 771
            LDP+CCF+CD  H T+E+CMVHMHK HGFFIPD+EYLKDPKGLLTYLGLKVKRD+MCLYC
Sbjct: 181  LDPACCFMCDQGHNTIENCMVHMHKHHGFFIPDIEYLKDPKGLLTYLGLKVKRDYMCLYC 240

Query: 770  NDRCLPFNSLEAVRKHMLAKSHCKVRXXXXXXXXXXXXXXXXXYSSSYVDAAGKQLVSSD 591
            NDRC PF+SLEAVRKHM+AKSHCKV                  YSSSYVD  G+QLV S 
Sbjct: 241  NDRCYPFSSLEAVRKHMVAKSHCKVHFGDGDDEEEVELEDFYDYSSSYVDEQGEQLVVSG 300

Query: 590  DMTNTVELGSGGSELVITRKNDIGTSIRTLGSREFLRYYRQKPRPSSTGGVALAAALASR 411
            D TN +EL  GG ELVI+RK+   TS RTLGSREFLRYYRQKPRP S   +A+ AALASR
Sbjct: 301  DTTNNIEL-FGGFELVISRKSGDKTSTRTLGSREFLRYYRQKPRP-SPANMAITAALASR 358

Query: 410  YKSMGLATVQSREQLVRLKVLREMNRSGVEVMRSKMGMKSNVIRNLPKNCTY 255
            Y+SMGLATVQSREQ+VR+KVL++M+++GVE MRSKMGMKSNVIRNLPKNCTY
Sbjct: 359  YRSMGLATVQSREQIVRMKVLKQMSKTGVENMRSKMGMKSNVIRNLPKNCTY 410


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