BLASTX nr result

ID: Coptis25_contig00002054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002054
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275737.1| PREDICTED: uncharacterized protein LOC100263...   340   5e-91
ref|XP_002303556.1| predicted protein [Populus trichocarpa] gi|2...   339   8e-91
emb|CBI34769.3| unnamed protein product [Vitis vinifera]              338   1e-90
ref|XP_002509683.1| conserved hypothetical protein [Ricinus comm...   333   7e-89
ref|XP_002299570.1| predicted protein [Populus trichocarpa] gi|2...   333   7e-89

>ref|XP_002275737.1| PREDICTED: uncharacterized protein LOC100263264 [Vitis vinifera]
          Length = 720

 Score =  340 bits (872), Expect = 5e-91
 Identities = 187/329 (56%), Positives = 231/329 (70%), Gaps = 19/329 (5%)
 Frame = -2

Query: 1221 VYKTKLIQFLGRTTPIILQNDNGPCPLLAICXXXXXXXXXXXNGDSSGEVSLQRLLTLVA 1042
            ++KTK++QFLGRTTPIILQN+NGPCPLLAIC           + D + EVS Q+LL+LVA
Sbjct: 20   LHKTKVVQFLGRTTPIILQNENGPCPLLAICNVLLLKNNLNLSPDIA-EVSQQKLLSLVA 78

Query: 1041 DRLIESNSNSENKDAGYLENQRQNISDALNLLDRLATGIDVNVQFRKMDDFEFTRECAIF 862
            +RLI+SNSN  NKDAGY+ENQ+QNISDA++LL  LATGIDVN++FR++ DFEFTRECAIF
Sbjct: 79   ERLIDSNSNINNKDAGYVENQQQNISDAIDLLPCLATGIDVNIKFRRIGDFEFTRECAIF 138

Query: 861  DLLDIPLYHGWIVDPQDSQTAIAIGSKSYNTLMGELVALETTNSEEVHKSSPEADCVDFA 682
            DLLDIPLYHGWIVDPQDS+TA AIGSKSYN L+GELVAL++ N E   KS+PE DC+DFA
Sbjct: 139  DLLDIPLYHGWIVDPQDSETANAIGSKSYNALVGELVALDSRNMEGEPKSTPEEDCIDFA 198

Query: 681  AATTATLGVPSPSLSRARSLDDSPRSVSGLEGARKGDREEEAELLRAIKLSDTELQTSFD 502
            AATTATLGVPSPSLSRARS +DSP S+S  +  RKGD +EEAEL R +KLS+ EL T+ D
Sbjct: 199  AATTATLGVPSPSLSRARSFEDSPHSISDNQTVRKGDLQEEAELSRILKLSEAELSTTVD 258

Query: 501  ES----PLGETNRTDISAFANESTSFEAGVGG-------------DMLEGHSGGHLQFDK 373
            +S     +G  +    S   N +       G              + LE H+GG  Q   
Sbjct: 259  DSLIVNAIGGISIHSDSVVVNTNGEISVSSGASSYPNKCMPVPLVETLEVHTGGTDQNFH 318

Query: 372  PEQSTV--DNNASGDCDGGRQSSETNPIE 292
             +++ +  D NA    +    SS+T P E
Sbjct: 319  QQEAAISDDYNALSRDENNLPSSQTTPAE 347


>ref|XP_002303556.1| predicted protein [Populus trichocarpa] gi|222840988|gb|EEE78535.1|
            predicted protein [Populus trichocarpa]
          Length = 596

 Score =  339 bits (870), Expect = 8e-91
 Identities = 188/319 (58%), Positives = 223/319 (69%), Gaps = 11/319 (3%)
 Frame = -2

Query: 1221 VYKTKLIQFLGRTTPIILQNDNGPCPLLAICXXXXXXXXXXXNGDSSGEVSLQRLLTLVA 1042
            ++KTK I FLGRTTPI+LQNDNGPCPLLAIC           + DS+ EVS ++LL+LVA
Sbjct: 37   LHKTKTIHFLGRTTPIVLQNDNGPCPLLAICNVLLLKNDLNLSSDSA-EVSQEKLLSLVA 95

Query: 1041 DRLIESNSNSENKDAGYLENQRQNISDALNLLDRLATGIDVNVQFRKMDDFEFTRECAIF 862
            +RLI+SNSN  NKDAGY+ENQ+QNI+DA++LL RLATGIDVN++FR++DDFEFTRECAIF
Sbjct: 96   ERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNLKFRRIDDFEFTRECAIF 155

Query: 861  DLLDIPLYHGWIVDPQDSQTAIAIGSKSYNTLMGELVALETTNSE--------EVHKSSP 706
            DLLDIPLYHGWIVDPQD  TA AIG KSYNTLMGELVALET N E        E  K+  
Sbjct: 156  DLLDIPLYHGWIVDPQDYDTANAIGPKSYNTLMGELVALETRNMEDESKNLTGEHSKTKT 215

Query: 705  EADCVDFAAATTATLGVPSPSLSRARSLDDSPRSVSGLEGARKGDREEEAELLRAIKLSD 526
            E DC+DF AATTATLGVPSP LS+ARS DDSP SVS  +  RKGD EEEAELLR +KLS+
Sbjct: 216  EEDCIDFVAATTATLGVPSPCLSKARSFDDSPHSVSDHQKVRKGDLEEEAELLRVLKLSE 275

Query: 525  TELQTSFDESPLGETNRTDISAFANESTSFEAGV---GGDMLEGHSGGHLQFDKPEQSTV 355
            TEL  S D+  + + +   +S  ++EST  +  +     D  EGH G            V
Sbjct: 276  TELPISVDDF-VADVDGRVVSVGSHESTPMKGTMVVASWDTSEGHVG------------V 322

Query: 354  DNNASGDCDGGRQSSETNP 298
            D N   D   GR  +   P
Sbjct: 323  DINLKSDSSSGRMQNFDTP 341


>emb|CBI34769.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  338 bits (868), Expect = 1e-90
 Identities = 188/337 (55%), Positives = 233/337 (69%), Gaps = 1/337 (0%)
 Frame = -2

Query: 1221 VYKTKLIQFLGRTTPIILQNDNGPCPLLAICXXXXXXXXXXXNGDSSGEVSLQRLLTLVA 1042
            ++KTK++QFLGRTTPIILQN+NGPCPLLAIC           + D + EVS Q+LL+LVA
Sbjct: 20   LHKTKVVQFLGRTTPIILQNENGPCPLLAICNVLLLKNNLNLSPDIA-EVSQQKLLSLVA 78

Query: 1041 DRLIESNSNSENKDAGYLENQRQNISDALNLLDRLATGIDVNVQFRKMDDFEFTRECAIF 862
            +RLI+SNSN  NKDAGY+ENQ+QNISDA++LL  LATGIDVN++FR++ DFEFTRECAIF
Sbjct: 79   ERLIDSNSNINNKDAGYVENQQQNISDAIDLLPCLATGIDVNIKFRRIGDFEFTRECAIF 138

Query: 861  DLLDIPLYHGWIVDPQDSQTAIAIGSKSYNTLMGELVALETTNSEEVHKSSPEADCVDFA 682
            DLLDIPLYHGWIVDPQDS+TA AIGSKSYN L+GELVAL++ N E   KS+PE DC+DFA
Sbjct: 139  DLLDIPLYHGWIVDPQDSETANAIGSKSYNALVGELVALDSRNMEGEPKSTPEEDCIDFA 198

Query: 681  AATTATLGVPSPSLSRARSLDDSPRSVSGLEGARKGDREEEAELLRAIKLSDTELQTSFD 502
            AATTATLGVPSPSLSRARS +DSP S+S  +  RKGD +EEAEL R +KLS+ EL T+ D
Sbjct: 199  AATTATLGVPSPSLSRARSFEDSPHSISDNQTVRKGDLQEEAELSRILKLSEAELSTTVD 258

Query: 501  ESPLGETNRTDISAFANESTSFEAGVGGDMLEGHSGGHLQFDKPEQSTVDN-NASGDCDG 325
            +S +       I   +  S S      G++          F + E +  D+ NA    + 
Sbjct: 259  DSLIVNA----IGGISIHSDSVVVNTNGEI---SVSSDQNFHQQEAAISDDYNALSRDEN 311

Query: 324  GRQSSETNPIEKDQEHFKISTECSISSDLKEHVKSAD 214
               SS+T P E       +  E + S   +    SAD
Sbjct: 312  NLPSSQTTPAEGTNGENLVQNENAPSPSTRRDPISAD 348


>ref|XP_002509683.1| conserved hypothetical protein [Ricinus communis]
            gi|223549582|gb|EEF51070.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 730

 Score =  333 bits (853), Expect = 7e-89
 Identities = 177/279 (63%), Positives = 211/279 (75%), Gaps = 3/279 (1%)
 Frame = -2

Query: 1221 VYKTKLIQFLGRTTPIILQNDNGPCPLLAICXXXXXXXXXXXNGDSSGEVSLQRLLTLVA 1042
            V+KTK IQFLGRT PI+LQNDNGPCPLLAIC           + D + EVS ++LL+LVA
Sbjct: 42   VHKTKTIQFLGRTAPIVLQNDNGPCPLLAICNILLLRNNLNLSPDIA-EVSQEKLLSLVA 100

Query: 1041 DRLIESNSNSENKDAGYLENQRQNISDALNLLDRLATGIDVNVQFRKMDDFEFTRECAIF 862
            + LI+SNSN  NKDAGY+ENQ+QNI+DA++LL RLATGIDVN++FR++DDFEFT ECAIF
Sbjct: 101  EHLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIF 160

Query: 861  DLLDIPLYHGWIVDPQDSQTAIAIGSKSYNTLMGELVALETTNSEEVHKSSPEADCVDFA 682
            DLLDIPLYHGWIVDPQD  TAIAIGSKSYN +MGELVALET   E   K++ E D VDF 
Sbjct: 161  DLLDIPLYHGWIVDPQDYDTAIAIGSKSYNAIMGELVALETQVMEGESKNNAEEDSVDFV 220

Query: 681  AATTATLGVPSPSLSRARSLDDSPRSVSGLEGARKGDREEEAELLRAIKLSDTELQTSFD 502
            AATTATLGVPSP LS+ RS DDSP SVS  +  RKGD EEEAELL A+KLS+ EL TS  
Sbjct: 221  AATTATLGVPSPCLSKTRSFDDSPHSVSDNQSLRKGDLEEEAELLMALKLSEAELPTSTG 280

Query: 501  ESPLGETNRTDISAFANESTSFEAGV---GGDMLEGHSG 394
               + + +   +SA +++ TS +  V     DML+GH G
Sbjct: 281  NMLVADVSEGVLSAASDKHTSSKESVPVSSVDMLKGHVG 319


>ref|XP_002299570.1| predicted protein [Populus trichocarpa] gi|222846828|gb|EEE84375.1|
            predicted protein [Populus trichocarpa]
          Length = 686

 Score =  333 bits (853), Expect = 7e-89
 Identities = 178/284 (62%), Positives = 210/284 (73%), Gaps = 8/284 (2%)
 Frame = -2

Query: 1221 VYKTKLIQFLGRTTPIILQNDNGPCPLLAICXXXXXXXXXXXNGDSSGEVSLQRLLTLVA 1042
            ++KTK I+FLGRTTPI+LQNDNGPCPLLAIC           + DS+ EVS ++LL+LVA
Sbjct: 31   LHKTKTIEFLGRTTPIVLQNDNGPCPLLAICNVLLLKNNLNLSPDSA-EVSQEKLLSLVA 89

Query: 1041 DRLIESNSNSENKDAGYLENQRQNISDALNLLDRLATGIDVNVQFRKMDDFEFTRECAIF 862
            +RLI+SNSN  NKDAGY+ENQ+QNI+DA++LL RLATGIDVN++FR++DDFEFTRECAIF
Sbjct: 90   ERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNLKFRRIDDFEFTRECAIF 149

Query: 861  DLLDIPLYHGWIVDPQDSQTAIAIGSKSYNTLMGELVALETTNSE--------EVHKSSP 706
            DLLDIPLYHGWIVDP D  TA AIGSKSYNTLMGELVALET N E        E  KS  
Sbjct: 150  DLLDIPLYHGWIVDPLDYDTANAIGSKSYNTLMGELVALETRNMEDESKNVTREDFKSKT 209

Query: 705  EADCVDFAAATTATLGVPSPSLSRARSLDDSPRSVSGLEGARKGDREEEAELLRAIKLSD 526
            E DCVDF AATTATLGVPSP LS+ARS DDSPRS S  +  RKGD EE A LLR +K S+
Sbjct: 210  EEDCVDFVAATTATLGVPSPCLSKARSFDDSPRSASDHQNVRKGDLEEAAALLRVLKFSE 269

Query: 525  TELQTSFDESPLGETNRTDISAFANESTSFEAGVGGDMLEGHSG 394
             EL  S  +S + + N   +   ++ESTS +  V    L+   G
Sbjct: 270  AELPCSAGDSLVSDVNGRVLFVSSDESTSMKGAVTVTSLDTSEG 313


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