BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002052
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53176.1| JHL18I08.10 [Jatropha curcas]                         409   e-112
emb|CBI19782.3| unnamed protein product [Vitis vinifera]              405   e-110
ref|XP_002510468.1| Transcription initiation factor IIF subunit ...   404   e-110
ref|XP_004152667.1| PREDICTED: transcription initiation factor I...   403   e-110
ref|XP_002279990.2| PREDICTED: transcription initiation factor I...   403   e-110

>dbj|BAJ53176.1| JHL18I08.10 [Jatropha curcas]
          Length = 262

 Score =  409 bits (1051), Expect = e-112
 Identities = 201/257 (78%), Positives = 225/257 (87%), Gaps = 2/257 (0%)
 Frame = +1

Query: 94  DRNGSSSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHAS--DPHPVAKVVLSIDPLRSSD 267
           D   + S+   L+TAK+DRSVWLMK PLVV+KSWQ+HAS  D HPVAKVVLS+DPLRS D
Sbjct: 4   DHGNNGSNSGVLETAKADRSVWLMKCPLVVAKSWQSHASSSDSHPVAKVVLSLDPLRS-D 62

Query: 268 DPSSVQFTMEMADTDSGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDMKPH 447
           DPS++QFTMEMA  + GN+PK YSLNMFKDFVPM VF+E + G++A+EGKVEHKFDMKPH
Sbjct: 63  DPSALQFTMEMAGNEIGNIPKSYSLNMFKDFVPMCVFSETSQGRVAMEGKVEHKFDMKPH 122

Query: 448 NENIEAYGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTAPVK 627
            ENIE YG+LCRERT+KS +KNRQIQ+IDNDRG HMR  PG +GL+SS SKDKKKTAPVK
Sbjct: 123 EENIEEYGRLCRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMIGLMSSSSKDKKKTAPVK 182

Query: 628 ASDMKRTRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKRGTN 807
            SDMKRTRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKRGTN
Sbjct: 183 QSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTN 242

Query: 808 QGTYELKPEYKKSVEDA 858
           QGTYELKPEYKKS EDA
Sbjct: 243 QGTYELKPEYKKSAEDA 259


>emb|CBI19782.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  405 bits (1040), Expect = e-110
 Identities = 200/250 (80%), Positives = 222/250 (88%), Gaps = 1/250 (0%)
 Frame = +1

Query: 109 SSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHAS-DPHPVAKVVLSIDPLRSSDDPSSVQ 285
           +SS SNL+T K++RSVWLMK PL VSKSWQ+H+S +  PVAKVVLS+DPLRS +DPS+++
Sbjct: 7   NSSSSNLETGKAERSVWLMKCPLAVSKSWQSHSSSESQPVAKVVLSLDPLRS-EDPSALE 65

Query: 286 FTMEMADTDSGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDMKPHNENIEA 465
           FTMEM  T + NMPK YSLNMFKDFVPM VF+E N G++A+EGKVEHKFDMKPHNENIE 
Sbjct: 66  FTMEMTGTGAPNMPKSYSLNMFKDFVPMCVFSETNQGRVAMEGKVEHKFDMKPHNENIEE 125

Query: 466 YGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTAPVKASDMKR 645
           YGKLCRERT+KS IKNRQIQ+IDNDRG HMR  PG VGLI+S SKDKKKTAPVK SDMKR
Sbjct: 126 YGKLCRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLIASNSKDKKKTAPVKGSDMKR 185

Query: 646 TRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKRGTNQGTYEL 825
           TRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKRGTNQGTYEL
Sbjct: 186 TRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYEL 245

Query: 826 KPEYKKSVED 855
           KPEYKKS ED
Sbjct: 246 KPEYKKSAED 255


>ref|XP_002510468.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
           communis] gi|223551169|gb|EEF52655.1| Transcription
           initiation factor IIF subunit beta, putative [Ricinus
           communis]
          Length = 257

 Score =  404 bits (1038), Expect = e-110
 Identities = 202/256 (78%), Positives = 224/256 (87%), Gaps = 2/256 (0%)
 Frame = +1

Query: 94  DRNGSSSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHAS--DPHPVAKVVLSIDPLRSSD 267
           D +  SSSG  L+TAK+DRSVWLMK PLVV++SW++HAS  D HPVAKVVLS+DPLRS D
Sbjct: 2   DEDHGSSSGI-LETAKADRSVWLMKCPLVVARSWKSHASSSDSHPVAKVVLSLDPLRSDD 60

Query: 268 DPSSVQFTMEMADTDSGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDMKPH 447
              S+QFTMEMA T++GN+PK YSLNMFKDFVPM VF+E   G++A+EGKVEHKFDMKPH
Sbjct: 61  ---SLQFTMEMAGTENGNVPKSYSLNMFKDFVPMSVFSETTQGRVAIEGKVEHKFDMKPH 117

Query: 448 NENIEAYGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTAPVK 627
            EN+E YG+LCRERT+KS IKNRQIQ+IDNDRG HMR  PG VGLISS SKDKKKTAPVK
Sbjct: 118 EENMEEYGRLCRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLISSSSKDKKKTAPVK 177

Query: 628 ASDMKRTRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKRGTN 807
            SDMKRTRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKRGTN
Sbjct: 178 QSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTN 237

Query: 808 QGTYELKPEYKKSVED 855
           QGTYELKPEYKKS ED
Sbjct: 238 QGTYELKPEYKKSAED 253


>ref|XP_004152667.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Cucumis sativus] gi|449520699|ref|XP_004167371.1|
           PREDICTED: transcription initiation factor IIF subunit
           beta-like [Cucumis sativus]
          Length = 260

 Score =  403 bits (1035), Expect = e-110
 Identities = 197/255 (77%), Positives = 225/255 (88%), Gaps = 1/255 (0%)
 Frame = +1

Query: 94  DRNGSSSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHA-SDPHPVAKVVLSIDPLRSSDD 270
           D +GS  S SNLDT K+DRSVWLMK PL+V+KSWQAH  SD  P+AKV+LS+DPL+S D+
Sbjct: 3   DEHGSGGSSSNLDTGKADRSVWLMKCPLLVAKSWQAHPPSDSLPLAKVILSLDPLQS-DE 61

Query: 271 PSSVQFTMEMADTDSGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDMKPHN 450
            SS+QF MEMA T++GN+PK +SLNMFKDFVPM VF+E + GK+++EGKVEHKFDMKPH+
Sbjct: 62  SSSLQFKMEMAGTETGNVPKSFSLNMFKDFVPMCVFSEASQGKVSMEGKVEHKFDMKPHS 121

Query: 451 ENIEAYGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTAPVKA 630
           EN+E YGKLCRERT+KS +KNRQIQ+IDNDRG HMR  PG VGLISS SK+KKK APVK 
Sbjct: 122 ENLEMYGKLCRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMVGLISSTSKEKKKVAPVKQ 181

Query: 631 SDMKRTRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKRGTNQ 810
           SD+KRTRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKRGTNQ
Sbjct: 182 SDVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQ 241

Query: 811 GTYELKPEYKKSVED 855
           GTYELKPEYKKSVED
Sbjct: 242 GTYELKPEYKKSVED 256


>ref|XP_002279990.2| PREDICTED: transcription initiation factor IIF subunit beta [Vitis
           vinifera]
          Length = 260

 Score =  403 bits (1035), Expect = e-110
 Identities = 199/250 (79%), Positives = 218/250 (87%), Gaps = 1/250 (0%)
 Frame = +1

Query: 109 SSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHAS-DPHPVAKVVLSIDPLRSSDDPSSVQ 285
           +SS SNL+T K++RSVWLMK PL VSKSWQ+H+S +  PVAKVVLS+DPLRS D  +  Q
Sbjct: 7   NSSSSNLETGKAERSVWLMKCPLAVSKSWQSHSSSESQPVAKVVLSLDPLRSEDPSALEQ 66

Query: 286 FTMEMADTDSGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDMKPHNENIEA 465
           FTMEM  T + NMPK YSLNMFKDFVPM VF+E N G++A+EGKVEHKFDMKPHNENIE 
Sbjct: 67  FTMEMTGTGAPNMPKSYSLNMFKDFVPMCVFSETNQGRVAMEGKVEHKFDMKPHNENIEE 126

Query: 466 YGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTAPVKASDMKR 645
           YGKLCRERT+KS IKNRQIQ+IDNDRG HMR  PG VGLI+S SKDKKKTAPVK SDMKR
Sbjct: 127 YGKLCRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLIASNSKDKKKTAPVKGSDMKR 186

Query: 646 TRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKRGTNQGTYEL 825
           TRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKRGTNQGTYEL
Sbjct: 187 TRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTNQGTYEL 246

Query: 826 KPEYKKSVED 855
           KPEYKKS ED
Sbjct: 247 KPEYKKSAED 256