BLASTX nr result

ID: Coptis25_contig00002051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002051
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002971671.1| hypothetical protein SELMODRAFT_412188 [Sela...    75   4e-12
ref|XP_001761054.1| predicted protein [Physcomitrella patens sub...    75   6e-12
ref|XP_002965668.1| hypothetical protein SELMODRAFT_407234 [Sela...    75   7e-12
ref|XP_002301388.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002970540.1| hypothetical protein SELMODRAFT_441151 [Sela...    69   5e-10

>ref|XP_002971671.1| hypothetical protein SELMODRAFT_412188 [Selaginella moellendorffii]
           gi|300160803|gb|EFJ27420.1| hypothetical protein
           SELMODRAFT_412188 [Selaginella moellendorffii]
          Length = 373

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
 Frame = +3

Query: 18  DESQSTLNVKILNAEGLKDNKFLGKMKSYVVIWMNPQLKQTRKTITSPTTNPTYNQSFSF 197
           D   ++L V I++A+GL+D    G+M  Y + W++P++K       +  +NP ++     
Sbjct: 21  DRHHNSLEVTIISAQGLRDTCIFGRMSPYALAWIDPEVKYCTHVAHNAGSNPAWDHKMYI 80

Query: 198 PLSPQTLQNPNSCITVQIISPSIHNKKKVIGSATMPVGDVRFEE-QVFALQIWRPSGRAH 374
           P  P +L+    C  VQI S        ++GS  +P+GDV     Q  A Q+ RPSGR H
Sbjct: 81  P-RPGSLRGVELC--VQIFSRGSGTNDPIVGSTKIPLGDVSDGGLQYMACQLQRPSGRIH 137

Query: 375 GLVRLS 392
           GL+ +S
Sbjct: 138 GLLNIS 143


>ref|XP_001761054.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687740|gb|EDQ74121.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 229

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
 Frame = +3

Query: 24  SQSTLNVKILNAEGLKDNKFLGKMKSYVVIWMNPQLKQTRKTITSPTTNPTYNQSFSFPL 203
           S  TL V +L AEGLK+   L KM  Y V W+ P  K+T    +    NP +N + SFP+
Sbjct: 2   SGPTLEVIVLAAEGLKNVNILRKMSVYAVAWVAPDYKRTTSVHSKAGRNPFWNDALSFPV 61

Query: 204 SPQTLQNPNSCITVQIISPSIHNKKKVIGSATMPVGDV---------RFEEQVFALQIWR 356
           +   L +P S +T+Q+ S    +  +++GS  + + D+           E  + AL + R
Sbjct: 62  TDDILLHPCSALTIQVYSAGTVS-PRLVGSTHLALRDIARMKATKTNSEEGDIVALPLQR 120

Query: 357 PSGRAHGLVRL 389
           PSGR  G+V L
Sbjct: 121 PSGRTQGIVSL 131


>ref|XP_002965668.1| hypothetical protein SELMODRAFT_407234 [Selaginella moellendorffii]
           gi|300166482|gb|EFJ33088.1| hypothetical protein
           SELMODRAFT_407234 [Selaginella moellendorffii]
          Length = 373

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
 Frame = +3

Query: 18  DESQSTLNVKILNAEGLKDNKFLGKMKSYVVIWMNPQLKQTRKTITSPTTNPTYNQSFSF 197
           D   ++L V I++A+GL+D    G+M  Y + W++P++K       +  +NP ++     
Sbjct: 21  DRHHNSLEVTIISAQGLRDTCIFGRMSPYALAWIDPEVKYCTHVAHNAGSNPAWDHKMYI 80

Query: 198 PLSPQTLQNPNSCITVQIISPSIHNKKKVIGSATMPVGDV-RFEEQVFALQIWRPSGRAH 374
           P  P +L+    C  VQI S        ++GS  +P+GDV     Q  A Q+ RPSGR H
Sbjct: 81  P-RPGSLRGVELC--VQIFSRGSGTNDPIVGSTKIPLGDVIDGGLQYMACQLQRPSGRIH 137

Query: 375 GLVRLS 392
           GL+ +S
Sbjct: 138 GLLNIS 143


>ref|XP_002301388.1| predicted protein [Populus trichocarpa] gi|222843114|gb|EEE80661.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
 Frame = +3

Query: 36  LNVKILNAEGLKD-NKFLGKMKSYVVIWMNPQLKQTRKTITSPTTNPTYNQSFSFPLSPQ 212
           L + +++A+GLK  +  L +M++Y ++W++P  K   +T    + NPT+N  F F ++P+
Sbjct: 6   LEINLISAQGLKPPSANLRRMQTYAIVWIDPSTKLRTRTDRVGSENPTWNDKFLFKVTPE 65

Query: 213 TLQNPNSCITVQIISPSIHNKKKVIGSATMPVGDVRFE--------EQVFALQIWRPSGR 368
            L +  S ++++I +     +  +IG+    VG++R              ALQI RPSGR
Sbjct: 66  YLSSETSGVSIEIYAIGC-IRDALIGTVRFLVGNLRLSTPSAAITMPSCIALQIRRPSGR 124

Query: 369 AHGLVRLSA 395
            HG++ + A
Sbjct: 125 FHGVINIGA 133


>ref|XP_002970540.1| hypothetical protein SELMODRAFT_441151 [Selaginella moellendorffii]
           gi|300162056|gb|EFJ28670.1| hypothetical protein
           SELMODRAFT_441151 [Selaginella moellendorffii]
          Length = 270

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
 Frame = +3

Query: 36  LNVKILNAEGLKDNKFLGKMKSYVVIWMNPQLKQTRKTITSPTTNPTYNQSFSFPLSPQT 215
           L V  ++AE LKD K +GKM++YVV W++P  K +      P  NP +N+     +  Q 
Sbjct: 8   LEVTPISAEDLKDVKLVGKMQTYVVAWVDPSRKASTNLSQLPGKNPRWNEKLMLSVEDQL 67

Query: 216 LQNPNSCITVQIISPSIHNKKKVIGSATMPVGDVRFE---EQVFALQIWRPSGRAHGLVR 386
           LQ P + + ++I       +  ++G A +P+ ++  +   +   + ++ RPSGR  G + 
Sbjct: 68  LQQPGAFLVLEIYHRGF-LESTIVGRANIPLQEISAKGSGDAPLSFKVRRPSGRLQGTIH 126

Query: 387 LSAWV 401
           +S  V
Sbjct: 127 VSVKV 131


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