BLASTX nr result
ID: Coptis25_contig00002049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002049
(1451 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vi... 475 e-131
emb|CBI29601.3| unnamed protein product [Vitis vinifera] 439 e-121
ref|XP_003590714.1| RRP12-like protein [Medicago truncatula] gi|... 423 e-116
ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like p... 422 e-115
ref|XP_004144131.1| PREDICTED: RRP12-like protein-like [Cucumis ... 422 e-115
>ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
Length = 1439
Score = 475 bits (1222), Expect = e-131
Identities = 252/461 (54%), Positives = 334/461 (72%), Gaps = 7/461 (1%)
Frame = -3
Query: 1362 LEMDTIVSTIEENEDIGNTVLFRYTNSTQEDHQHLCAVVGAMSQELKDQKLPLTPITYFG 1183
+EM+ ++E + G+ +L R++NSTQE+HQHLC V+G MSQELKDQ L TP+TYFG
Sbjct: 171 IEMEVPQFQMDETDFCGS-ILSRFSNSTQEEHQHLCTVLGTMSQELKDQNLSTTPVTYFG 229
Query: 1182 ATISSLDRLSTDPNPADSVITALLTFLSMVLPQISVPVLRKRRAFVMDPVLRVIRFEDMS 1003
T SSLDRLS+DP+ I +LLT LSMVLP+IS +L+K+R F+ + ++RV+R +
Sbjct: 230 VTCSSLDRLSSDPDSPTHSIDSLLTILSMVLPRISPAILKKKREFLSELLVRVLRSKSPP 289
Query: 1002 VGAVNAGLKCVSQVLVVSEKVNWLDISKEYNVLLVFVTDSRSKVRKQSHSCLRDILQSFQ 823
+ GLKC+S +L++ E NW D+S+ Y VLL F+TDS SKVR+QSH C+ D LQSFQ
Sbjct: 290 AAS---GLKCISHLLMIRESDNWSDVSQLYGVLLRFITDSHSKVRRQSHVCIHDTLQSFQ 346
Query: 822 RSAVLAPASEGITSIFERFLLLAGGSSSTDSGPRKGAQEVLHILDALKNCLSLMSMNAVT 643
S+ LAPASEGIT+IFER+LLLAGGS++ S KGAQEV++ILDALK+CL LMSM T
Sbjct: 347 GSSALAPASEGITNIFERYLLLAGGSNAAASERPKGAQEVIYILDALKDCLPLMSMKFTT 406
Query: 642 SILKYFKSLLELRQPLVTRRIANSLQLLCLSPTSEVASDILLDLLCKLAKSASEDEKSVD 463
++LKY K+LLEL QPLVTRRI +SL +C+ PTSEV+ ++LL+L+C LA S S +E++VD
Sbjct: 407 TVLKYLKTLLELHQPLVTRRIMDSLNAVCVHPTSEVSPEVLLELICSLALSVSGNERTVD 466
Query: 462 SLTFTARLLDVGIRKVYSLNRESSVKKLPFIFYALGEILXXXXXXXXXXXXXALRGLISS 283
+TFT RLLDVG+RKV+SL+R+ + KLP IF AL ++L AL+ LI +
Sbjct: 467 DITFTTRLLDVGMRKVHSLDRKICIVKLPVIFNALRDVLASEHEEALHAATEALKSLIHA 526
Query: 282 CIDGGLIKEEVEQMSDD-------EAPTTIVKICANIEKLLDDRFSAVWDLSLKVVSVMF 124
CID LIK+ V Q++ + PT I K+CA I+ LLD R+S VWD+S +V+S MF
Sbjct: 527 CIDVSLIKQGVNQITMNADMETRRSGPTIIEKLCATIKSLLDYRYSTVWDMSFQVISTMF 586
Query: 123 DKLGEFSFKLLRGTVMSLANMQDLTDEALQYRKQLHECFGS 1
+KLGE S LL GT+ +LA++Q L DE L YRKQLHEC GS
Sbjct: 587 NKLGENSSYLLMGTLKALADIQKLPDEDLIYRKQLHECVGS 627
>emb|CBI29601.3| unnamed protein product [Vitis vinifera]
Length = 1230
Score = 439 bits (1129), Expect = e-121
Identities = 234/420 (55%), Positives = 305/420 (72%), Gaps = 7/420 (1%)
Frame = -3
Query: 1239 MSQELKDQKLPLTPITYFGATISSLDRLSTDPNPADSVITALLTFLSMVLPQISVPVLRK 1060
MSQELKDQ L TP+TYFG T SSLDRLS+DP+ I +LLT LSMVLP+IS +L+K
Sbjct: 1 MSQELKDQNLSTTPVTYFGVTCSSLDRLSSDPDSPTHSIDSLLTILSMVLPRISPAILKK 60
Query: 1059 RRAFVMDPVLRVIRFEDMSVGAVNAGLKCVSQVLVVSEKVNWLDISKEYNVLLVFVTDSR 880
+R F+ + ++RV+R + + GLKC+S +L++ E NW D+S+ Y VLL F+TDS
Sbjct: 61 KREFLSELLVRVLRSKSPPAAS---GLKCISHLLMIRESDNWSDVSQLYGVLLRFITDSH 117
Query: 879 SKVRKQSHSCLRDILQSFQRSAVLAPASEGITSIFERFLLLAGGSSSTDSGPRKGAQEVL 700
SKVR+QSH C+ D LQSFQ S+ LAPASEGIT+IFER+LLLAGGS++ S KGAQEV+
Sbjct: 118 SKVRRQSHVCIHDTLQSFQGSSALAPASEGITNIFERYLLLAGGSNAAASERPKGAQEVI 177
Query: 699 HILDALKNCLSLMSMNAVTSILKYFKSLLELRQPLVTRRIANSLQLLCLSPTSEVASDIL 520
+ILDALK+CL LMSM T++LKY K+LLEL QPLVTRRI +SL +C+ PTSEV+ ++L
Sbjct: 178 YILDALKDCLPLMSMKFTTTVLKYLKTLLELHQPLVTRRIMDSLNAVCVHPTSEVSPEVL 237
Query: 519 LDLLCKLAKSASEDEKSVDSLTFTARLLDVGIRKVYSLNRESSVKKLPFIFYALGEILXX 340
L+L+C LA S S +E++VD +TFT RLLDVG+RKV+SL+R+ + KLP IF AL ++L
Sbjct: 238 LELICSLALSVSGNERTVDDITFTTRLLDVGMRKVHSLDRKICIVKLPVIFNALRDVLAS 297
Query: 339 XXXXXXXXXXXALRGLISSCIDGGLIKEEVEQMSDD-------EAPTTIVKICANIEKLL 181
AL+ LI +CID LIK+ V Q++ + PT I K+CA I+ LL
Sbjct: 298 EHEEALHAATEALKSLIHACIDVSLIKQGVNQITMNADMETRRSGPTIIEKLCATIKSLL 357
Query: 180 DDRFSAVWDLSLKVVSVMFDKLGEFSFKLLRGTVMSLANMQDLTDEALQYRKQLHECFGS 1
D R+S VWD+S +V+S MF+KLGE S LL GT+ +LA++Q L DE L YRKQLHEC GS
Sbjct: 358 DYRYSTVWDMSFQVISTMFNKLGENSSYLLMGTLKALADIQKLPDEDLIYRKQLHECVGS 417
>ref|XP_003590714.1| RRP12-like protein [Medicago truncatula] gi|355479762|gb|AES60965.1|
RRP12-like protein [Medicago truncatula]
Length = 1328
Score = 423 bits (1088), Expect = e-116
Identities = 229/462 (49%), Positives = 315/462 (68%), Gaps = 7/462 (1%)
Frame = -3
Query: 1365 GLEMDTIVSTIEENEDIGNTVLFRYTNSTQEDHQHLCAVVGAMSQELKDQKLPLTPITYF 1186
G+EM+ E N+DI N++L R++ ST HQHLC V+GAMSQELKD LP TP+ YF
Sbjct: 3 GIEMEQPTFNNESNDDICNSILSRFSKSTAVSHQHLCTVIGAMSQELKDHNLPSTPVAYF 62
Query: 1185 GATISSLDRLSTDPNPADSVITALLTFLSMVLPQISVPVLRKRRAFVMDPVLRVIRFEDM 1006
GAT SSL+R+ +PNP D VI +L+T LS+V+ ++ + VL+K R + + +++VI +
Sbjct: 63 GATCSSLNRIVPEPNPPDHVIDSLVTILSIVIVKVPMAVLKKERESLSELIVKVIHSQSS 122
Query: 1005 --SVGAVNAGLKCVSQVLVVSEKVNWLDISKEYNVLLVFVTDSRSKVRKQSHSCLRDILQ 832
S V LKC S +L+ + V+W D+S +N+LL F+TDSR KVR+QSH LRD+L
Sbjct: 123 KNSESVVVDALKCASHLLIHRDSVHWSDVSTLFNLLLGFLTDSRPKVRRQSHLGLRDVLI 182
Query: 831 SFQRSAVLAPASEGITSIFERFLLLAGGSSSTDSGPRKGAQEVLHILDALKNCLSLMSMN 652
+FQ+S++LA ASEG+ ++ ERFLLLAGG+++ KGAQ+VL++LDALK CL L+S+
Sbjct: 183 NFQKSSLLASASEGVKNLLERFLLLAGGANANAGEGTKGAQQVLYVLDALKECLPLLSLK 242
Query: 651 AVTSILKYFKSLLELRQPLVTRRIANSLQLLCLSPTSEVASDILLDLLCKLAK-SASEDE 475
SILK+FK+LL LRQPLVTRRI ++L +CL+ TSEV+S+ LL++L L+ S S +E
Sbjct: 243 DKNSILKHFKTLLNLRQPLVTRRIMDALNFICLNSTSEVSSEALLEVLSTLSSLSTSSNE 302
Query: 474 KSVDSLTFTARLLDVGIRKVYSLNRESSVKKLPFIFYALGEILXXXXXXXXXXXXXALRG 295
S D +TFTARLLD G++KV+SLNR+ V KLP +F L +IL AL+
Sbjct: 303 ISGDGMTFTARLLDAGMKKVFSLNRQMCVIKLPSVFSDLKDILASEHEEAIFAATDALKS 362
Query: 294 LISSCIDGGLIKEEVEQMSDDEA----PTTIVKICANIEKLLDDRFSAVWDLSLKVVSVM 127
+I+ C+D LIK+ V+Q++ DE+ PT I KICA IE LLD ++A WD VVS M
Sbjct: 363 MINYCVDESLIKQGVDQITLDESRRSGPTIIEKICATIESLLDYHYAAAWDRVFDVVSAM 422
Query: 126 FDKLGEFSFKLLRGTVMSLANMQDLTDEALQYRKQLHECFGS 1
F KLG S +RG + +L +MQ L DE +RKQLH C GS
Sbjct: 423 FHKLGSDSPYFMRGILKNLEDMQKLPDEDFPFRKQLHTCLGS 464
>ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like protein-like [Cucumis
sativus]
Length = 1265
Score = 422 bits (1085), Expect = e-115
Identities = 226/458 (49%), Positives = 308/458 (67%), Gaps = 3/458 (0%)
Frame = -3
Query: 1365 GLEMDTIVSTIEENEDIGNTVLFRYTNSTQEDHQHLCAVVGAMSQELKDQKLPLTPITYF 1186
GLEM+ E N+D N++LFR+++ST E+HQHLCAV+GAM+QEL+DQ LP TP+ YF
Sbjct: 5 GLEMEASFD-FESNDDFCNSILFRFSDSTNEEHQHLCAVIGAMAQELRDQSLPSTPLAYF 63
Query: 1185 GATISSLDRLSTDPNPADSVITALLTFLSMVLPQISVPVLRKRRAFVMDPVLRVIRFEDM 1006
GAT SSLDR+S++P P+ ++ ALLT LS++LP+IS P+L K++ F+ ++RV+R +
Sbjct: 64 GATCSSLDRISSEPEPSPHLLEALLTILSLLLPRISSPILNKKKDFLSYLLIRVLRVPSL 123
Query: 1005 SVGAVNAGLKCVSQVLVVSEKVNWLDISKEYNVLLVFVTDSRSKVRKQSHSCLRDILQSF 826
+ GA GLKCVS +++V VNW D+S + +L FV DSR K
Sbjct: 124 TPGAATFGLKCVSHLVIVRNAVNWSDVSNLFGFILGFVIDSRPK---------------- 167
Query: 825 QRSAVLAPASEGITSIFERFLLLAGGSSSTDSGPRKGAQEVLHILDALKNCLSLMSMNAV 646
+ +L ASEG+ ++FE+ LLLAGGS+ KGAQEVL IL+AL+ CL LMSM +
Sbjct: 168 -GTPLLPSASEGVANVFEKSLLLAGGSTPKAPEGPKGAQEVLFILEALRECLPLMSMKYI 226
Query: 645 TSILKYFKSLLELRQPLVTRRIANSLQLLCLSPTSEVASDILLDLLCKLAKSASEDEKSV 466
T+ILKY+K+LLEL QP+VTRRI +SL LCL PT +V++++LLDLLC +A S S E S
Sbjct: 227 TNILKYYKTLLELHQPVVTRRITDSLNSLCLHPTVDVSAEVLLDLLCSMAVSFSTSETSA 286
Query: 465 DSLTFTARLLDVGIRKVYSLNRESSVKKLPFIFYALGEILXXXXXXXXXXXXXALRGLIS 286
D L FTARLL+VG+ KVY +NR+ V KLP F AL +I+ A++ LI
Sbjct: 287 DGLAFTARLLNVGMEKVYKINRQICVVKLPVTFNALKDIMLCDHEEAIRAAQDAMKNLIC 346
Query: 285 SCIDGGLIKEEV---EQMSDDEAPTTIVKICANIEKLLDDRFSAVWDLSLKVVSVMFDKL 115
+CI+ LI+E V + PT I K+CA IE LLD ++AV+DL+ +VVS MFDKL
Sbjct: 347 ACINEDLIREGVTTGNMEARRPGPTVIEKLCAIIESLLDYHYTAVFDLAFQVVSAMFDKL 406
Query: 114 GEFSFKLLRGTVMSLANMQDLTDEALQYRKQLHECFGS 1
G++S L+G ++SLA MQ L DE +RK+LHEC GS
Sbjct: 407 GKYSSHFLKGALISLAKMQKLRDEDFPFRKELHECLGS 444
>ref|XP_004144131.1| PREDICTED: RRP12-like protein-like [Cucumis sativus]
Length = 1264
Score = 422 bits (1085), Expect = e-115
Identities = 226/458 (49%), Positives = 308/458 (67%), Gaps = 3/458 (0%)
Frame = -3
Query: 1365 GLEMDTIVSTIEENEDIGNTVLFRYTNSTQEDHQHLCAVVGAMSQELKDQKLPLTPITYF 1186
GLEM+ E N+D N++LFR+++ST E+HQHLCAV+GAM+QEL+DQ LP TP+ YF
Sbjct: 5 GLEMEASFD-FESNDDFCNSILFRFSDSTNEEHQHLCAVIGAMAQELRDQSLPSTPLAYF 63
Query: 1185 GATISSLDRLSTDPNPADSVITALLTFLSMVLPQISVPVLRKRRAFVMDPVLRVIRFEDM 1006
GAT SSLDR+S++P P+ ++ ALLT LS++LP+IS P+L K++ F+ ++RV+R +
Sbjct: 64 GATCSSLDRISSEPEPSPHLLEALLTILSLLLPRISSPILNKKKDFLSYLLIRVLRVPSL 123
Query: 1005 SVGAVNAGLKCVSQVLVVSEKVNWLDISKEYNVLLVFVTDSRSKVRKQSHSCLRDILQSF 826
+ GA GLKCVS +++V VNW D+S + +L FV DSR K
Sbjct: 124 TPGAATFGLKCVSHLVIVRNAVNWSDVSNLFGFILGFVIDSRPK---------------- 167
Query: 825 QRSAVLAPASEGITSIFERFLLLAGGSSSTDSGPRKGAQEVLHILDALKNCLSLMSMNAV 646
+ +L ASEG+ ++FE+ LLLAGGS+ KGAQEVL IL+AL+ CL LMSM +
Sbjct: 168 -GTPLLPSASEGVANVFEKSLLLAGGSTPKAPEGPKGAQEVLFILEALRECLPLMSMKYI 226
Query: 645 TSILKYFKSLLELRQPLVTRRIANSLQLLCLSPTSEVASDILLDLLCKLAKSASEDEKSV 466
T+ILKY+K+LLEL QP+VTRRI +SL LCL PT +V++++LLDLLC +A S S E S
Sbjct: 227 TNILKYYKTLLELHQPVVTRRITDSLNSLCLHPTVDVSAEVLLDLLCSMAVSFSTSETSA 286
Query: 465 DSLTFTARLLDVGIRKVYSLNRESSVKKLPFIFYALGEILXXXXXXXXXXXXXALRGLIS 286
D L FTARLL+VG+ KVY +NR+ V KLP F AL +I+ A++ LI
Sbjct: 287 DGLAFTARLLNVGMEKVYKINRQICVVKLPVTFNALKDIMLCDHEEAIRAAQDAMKNLIC 346
Query: 285 SCIDGGLIKEEV---EQMSDDEAPTTIVKICANIEKLLDDRFSAVWDLSLKVVSVMFDKL 115
+CI+ LI+E V + PT I K+CA IE LLD ++AV+DL+ +VVS MFDKL
Sbjct: 347 ACINEDLIREGVTTGNMEARRPGPTVIEKLCAIIESLLDYHYTAVFDLAFQVVSAMFDKL 406
Query: 114 GEFSFKLLRGTVMSLANMQDLTDEALQYRKQLHECFGS 1
G++S L+G ++SLA MQ L DE +RK+LHEC GS
Sbjct: 407 GKYSSHFLKGALISLAKMQKLRDEDFPFRKELHECLGS 444