BLASTX nr result
ID: Coptis25_contig00002040
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002040 (1316 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas] 335 e-110 ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putativ... 336 e-110 ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 334 e-109 ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 335 e-108 emb|CAN76234.1| hypothetical protein VITISV_030204 [Vitis vinifera] 333 e-108 >dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas] Length = 455 Score = 335 bits (859), Expect(2) = e-110 Identities = 163/176 (92%), Positives = 171/176 (97%) Frame = +2 Query: 509 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVAALVLCHTRELAYQICHEF 688 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP AGQVAALVLCHTRELAYQICHEF Sbjct: 76 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEF 135 Query: 689 ERFSTYLPDLKVAVFYGGVHIKNHKDLLKNECPHVVVGTPGRILALAREKDLPLKNVRHF 868 ERFSTYLPD+KVAVFYGGV+IK HKD+LKNECPH+VVGTPGRILALAR+KDL LKNVRHF Sbjct: 136 ERFSTYLPDIKVAVFYGGVNIKVHKDILKNECPHIVVGTPGRILALARDKDLGLKNVRHF 195 Query: 869 ILDECDKMLESLDMRKDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKRFMQDVMSL 1036 ILDECDKMLESLDMR+DVQEIFKMTPHDKQVMMFSATLSKEIRPVCK+FMQD M + Sbjct: 196 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 251 Score = 91.7 bits (226), Expect(2) = e-110 Identities = 51/74 (68%), Positives = 52/74 (70%) Frame = +1 Query: 211 MGEVKDNNNXXXXXXXXXXXXXXXXXXXSVSAKATGESAKKGYVGIHSSGFRDFLLKPEL 390 MGEVKDN+ SVSAKA ESAKKGYVGIHSSGFRDFLLKPEL Sbjct: 1 MGEVKDND--AYEEELLDYEEEDEKAPDSVSAKAGAESAKKGYVGIHSSGFRDFLLKPEL 58 Query: 391 LRAIVDSGFEHPSE 432 LRAIVDSGFEHPSE Sbjct: 59 LRAIVDSGFEHPSE 72 >ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223545469|gb|EEF46974.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 275 Score = 336 bits (861), Expect(2) = e-110 Identities = 163/176 (92%), Positives = 170/176 (96%) Frame = +2 Query: 509 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVAALVLCHTRELAYQICHEF 688 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV ALVLCHTRELAYQICHEF Sbjct: 76 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQICHEF 135 Query: 689 ERFSTYLPDLKVAVFYGGVHIKNHKDLLKNECPHVVVGTPGRILALAREKDLPLKNVRHF 868 ERFSTYLPD KVAVFYGGVHIK HKDLLKNECPH+VVGTPGRILALAR+KDL LKNVRHF Sbjct: 136 ERFSTYLPDTKVAVFYGGVHIKIHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHF 195 Query: 869 ILDECDKMLESLDMRKDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKRFMQDVMSL 1036 ILDECDKMLESLDMR+DVQEIFKMTPHDKQVMMFSATLSKEIRPVCK+FMQD M + Sbjct: 196 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 251 Score = 89.4 bits (220), Expect(2) = e-110 Identities = 43/46 (93%), Positives = 44/46 (95%) Frame = +1 Query: 295 SVSAKATGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 432 SV+AK GESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE Sbjct: 27 SVAAKVNGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72 >ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera] gi|297743441|emb|CBI36308.3| unnamed protein product [Vitis vinifera] Length = 428 Score = 334 bits (857), Expect(2) = e-109 Identities = 163/176 (92%), Positives = 170/176 (96%) Frame = +2 Query: 509 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVAALVLCHTRELAYQICHEF 688 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP AGQVAALVLCHTRELAYQICHEF Sbjct: 76 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEF 135 Query: 689 ERFSTYLPDLKVAVFYGGVHIKNHKDLLKNECPHVVVGTPGRILALAREKDLPLKNVRHF 868 ERFSTYLPD+KVAVFYGGV IK HKDLLKNECPH+VVGTPGRILALAR+KDL LK+VRHF Sbjct: 136 ERFSTYLPDIKVAVFYGGVSIKTHKDLLKNECPHIVVGTPGRILALARDKDLGLKHVRHF 195 Query: 869 ILDECDKMLESLDMRKDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKRFMQDVMSL 1036 ILDECDKMLESLDMR+DVQEIFKMTPHDKQVMMFSATLSKEIRPVCK+FMQD M + Sbjct: 196 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 251 Score = 88.6 bits (218), Expect(2) = e-109 Identities = 42/46 (91%), Positives = 45/46 (97%) Frame = +1 Query: 295 SVSAKATGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 432 SV++KA GESAKKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSE Sbjct: 27 SVASKAAGESAKKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSE 72 >ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis vinifera] Length = 428 Score = 335 bits (858), Expect(2) = e-108 Identities = 163/176 (92%), Positives = 170/176 (96%) Frame = +2 Query: 509 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVAALVLCHTRELAYQICHEF 688 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP GQVAALVLCHTRELAYQICHEF Sbjct: 76 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVTGQVAALVLCHTRELAYQICHEF 135 Query: 689 ERFSTYLPDLKVAVFYGGVHIKNHKDLLKNECPHVVVGTPGRILALAREKDLPLKNVRHF 868 ERFSTYLPD+KVAVFYGGV+IK HKDLLKNECPH+VVGTPGRILALAR+KDL LKNVRHF Sbjct: 136 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALARDKDLALKNVRHF 195 Query: 869 ILDECDKMLESLDMRKDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKRFMQDVMSL 1036 ILDECDKMLESLDMR+DVQEIFKMTPHDKQVMMFSATLSKEIRPVCK+FMQD M + Sbjct: 196 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 251 Score = 86.7 bits (213), Expect(2) = e-108 Identities = 41/46 (89%), Positives = 43/46 (93%) Frame = +1 Query: 295 SVSAKATGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 432 SV+ K GE+AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE Sbjct: 27 SVTGKVNGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72 >emb|CAN76234.1| hypothetical protein VITISV_030204 [Vitis vinifera] Length = 383 Score = 333 bits (853), Expect(2) = e-108 Identities = 162/176 (92%), Positives = 170/176 (96%) Frame = +2 Query: 509 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVAALVLCHTRELAYQICHEF 688 +CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP AGQVAALVLCHTRELAYQICHEF Sbjct: 74 KCIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEF 133 Query: 689 ERFSTYLPDLKVAVFYGGVHIKNHKDLLKNECPHVVVGTPGRILALAREKDLPLKNVRHF 868 ERFSTYLPD+KVAVFYGGV IK HKDLLKNECPH+VVGTPGRILALAR+KDL LK+VRHF Sbjct: 134 ERFSTYLPDIKVAVFYGGVSIKTHKDLLKNECPHIVVGTPGRILALARDKDLGLKHVRHF 193 Query: 869 ILDECDKMLESLDMRKDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKRFMQDVMSL 1036 ILDECDKMLESLDMR+DVQEIFKMTPHDKQVMMFSATLSKEIRPVCK+FMQD M + Sbjct: 194 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 249 Score = 88.6 bits (218), Expect(2) = e-108 Identities = 42/46 (91%), Positives = 45/46 (97%) Frame = +1 Query: 295 SVSAKATGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 432 SV++KA GESAKKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSE Sbjct: 27 SVASKAAGESAKKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSE 72