BLASTX nr result

ID: Coptis25_contig00002034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002034
         (1979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285912.1| PREDICTED: T-complex protein 1 subunit beta ...   922   0.0  
ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-...   908   0.0  
ref|XP_004157926.1| PREDICTED: T-complex protein 1 subunit beta-...   902   0.0  
gb|ADL36834.1| TCP domain class transcription factor [Malus x do...   902   0.0  
ref|XP_003539816.1| PREDICTED: T-complex protein 1 subunit beta-...   894   0.0  

>ref|XP_002285912.1| PREDICTED: T-complex protein 1 subunit beta [Vitis vinifera]
            gi|302141688|emb|CBI18891.3| unnamed protein product
            [Vitis vinifera]
          Length = 527

 Score =  922 bits (2384), Expect = 0.0
 Identities = 474/506 (93%), Positives = 497/506 (98%)
 Frame = +2

Query: 2    ASFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVD 181
            ASFIGAMAIADL+KTTLGPKGMDKILQSTGRGRS++VTNDGATILKSLHIDNPAAKVLVD
Sbjct: 22   ASFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVD 81

Query: 182  ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVI 361
            ISKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTIISG+RMA+ECA NALL+KV+
Sbjct: 82   ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGYRMAAECARNALLQKVM 141

Query: 362  DNRDDAEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG 541
            DN++DAEKFK DLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG
Sbjct: 142  DNKEDAEKFKLDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG 201

Query: 542  GSLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMARVAQ 721
            GSL DSFLDEGFILDKKIGIGQPKRIENA ILVANTAMDTDKVKIYGARVRVDSM+RVAQ
Sbjct: 202  GSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSRVAQ 261

Query: 722  IEGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDGIERLALV 901
            IEGAEKEKM+EKVQKIIGHGINCF+NRQLIYNFPEELFADAG+LAIEHADFDGIERLALV
Sbjct: 262  IEGAEKEKMREKVQKIIGHGINCFVNRQLIYNFPEELFADAGVLAIEHADFDGIERLALV 321

Query: 902  TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEA 1081
            TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEA
Sbjct: 322  TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEA 381

Query: 1082 ERSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAFSKALQAI 1261
            ERSLHDALCVLSQTV+DSRVLLGGGWPEMVMAKEVDELARKTPGKK+HAIEAFS+AL +I
Sbjct: 382  ERSLHDALCVLSQTVIDSRVLLGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALISI 441

Query: 1262 PTTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKVKQAVLLS 1441
            PTTIADNAGLDSAELI++LRAEHHKE S AGIDVI+G+VGDM +LGISEAFKVKQAVLLS
Sbjct: 442  PTTIADNAGLDSAELIAQLRAEHHKEESHAGIDVISGSVGDMAELGISEAFKVKQAVLLS 501

Query: 1442 ATEAAEMILRVDEIISCAPRRREDRM 1519
            ATEAAEMILRVDEII+CAPRRREDRM
Sbjct: 502  ATEAAEMILRVDEIITCAPRRREDRM 527


>ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus]
          Length = 527

 Score =  908 bits (2347), Expect = 0.0
 Identities = 463/506 (91%), Positives = 493/506 (97%)
 Frame = +2

Query: 2    ASFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVD 181
            ASF+GAMAIADL+KTTLGPKGMDKILQSTGRGR ++VTNDGATILKSLHIDNPAAKVLVD
Sbjct: 22   ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGRQVTVTNDGATILKSLHIDNPAAKVLVD 81

Query: 182  ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVI 361
            ISKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTII+G+RMA+ECA NALL+KV+
Sbjct: 82   ISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMAAECARNALLQKVV 141

Query: 362  DNRDDAEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG 541
            DN+ D EKFKSDL+KIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG
Sbjct: 142  DNKADLEKFKSDLLKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG 201

Query: 542  GSLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMARVAQ 721
            GSL DSFLDEGFILDKKIGIGQPKRIENA ILVANTAMDTDKVKIYGARVRVDSM++VA+
Sbjct: 202  GSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKVAE 261

Query: 722  IEGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDGIERLALV 901
            IEGAEKEKM+EKV+KIIGHGINCF+NRQLIYNFPEELFADAGILAIEHADFDGIERLALV
Sbjct: 262  IEGAEKEKMREKVKKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALV 321

Query: 902  TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEA 1081
            TGGEIASTFDNPESVKLG+CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGAS HVLDEA
Sbjct: 322  TGGEIASTFDNPESVKLGYCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEA 381

Query: 1082 ERSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAFSKALQAI 1261
            ERSLHDALCVLSQTV DSRV+LGGGWPEM+M+KEVDELARKTPGKK+HAIEAFS+ALQAI
Sbjct: 382  ERSLHDALCVLSQTVNDSRVVLGGGWPEMIMSKEVDELARKTPGKKSHAIEAFSRALQAI 441

Query: 1262 PTTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKVKQAVLLS 1441
            PT IADNAGLDSA+LI++LRAEHHKEG  AGIDVITG+VGDM +LGISEAFKVKQA+LLS
Sbjct: 442  PTIIADNAGLDSADLIAQLRAEHHKEGCNAGIDVITGSVGDMAELGISEAFKVKQAILLS 501

Query: 1442 ATEAAEMILRVDEIISCAPRRREDRM 1519
            ATEAAEMILRVDEII+CAPRRREDRM
Sbjct: 502  ATEAAEMILRVDEIITCAPRRREDRM 527


>ref|XP_004157926.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus]
          Length = 534

 Score =  902 bits (2331), Expect = 0.0
 Identities = 463/513 (90%), Positives = 494/513 (96%), Gaps = 7/513 (1%)
 Frame = +2

Query: 2    ASFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVD 181
            ASF+GAMAIADL+KTTLGPKGMDKILQSTGRGR ++VTNDGATILKSLHIDNPAAKVLVD
Sbjct: 22   ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGRQVTVTNDGATILKSLHIDNPAAKVLVD 81

Query: 182  ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVI 361
            ISKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTII+G+RMA+ECA NALL+KV+
Sbjct: 82   ISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMAAECARNALLQKVV 141

Query: 362  DNRDD-------AEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESI 520
            DN+ D       +EKFKSDL+KIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESI
Sbjct: 142  DNKADLVVCWPFSEKFKSDLLKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESI 201

Query: 521  QIIKKPGGSLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVD 700
            QIIKKPGGSL DSFLDEGFILDKKIGIGQPKRIENA ILVANTAMDTDKVKIYGARVRVD
Sbjct: 202  QIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVD 261

Query: 701  SMARVAQIEGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDG 880
            SM++VA+IEGAEKEKM+EKV+KIIGHGINCF+NRQLIYNFPEELFADAGILAIEHADFDG
Sbjct: 262  SMSKVAEIEGAEKEKMREKVKKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDG 321

Query: 881  IERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGAS 1060
            IERLALVTGGEIASTFDNPESVKLG+CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGAS
Sbjct: 322  IERLALVTGGEIASTFDNPESVKLGYCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGAS 381

Query: 1061 FHVLDEAERSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAF 1240
             HVLDEAERSLHDALCVLSQTV DSRV+LGGGWPEM+M+KEVDELARKTPGKK+HAIEAF
Sbjct: 382  HHVLDEAERSLHDALCVLSQTVNDSRVVLGGGWPEMIMSKEVDELARKTPGKKSHAIEAF 441

Query: 1241 SKALQAIPTTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKV 1420
            S+ALQAIPT IADNAGLDSA+LI++LRAEHHKEG  AGIDVITG+VGDM +LGISEAFKV
Sbjct: 442  SRALQAIPTIIADNAGLDSADLIAQLRAEHHKEGCNAGIDVITGSVGDMAELGISEAFKV 501

Query: 1421 KQAVLLSATEAAEMILRVDEIISCAPRRREDRM 1519
            KQA+LLSATEAAEMILRVDEII+CAPRRREDRM
Sbjct: 502  KQAILLSATEAAEMILRVDEIITCAPRRREDRM 534


>gb|ADL36834.1| TCP domain class transcription factor [Malus x domestica]
          Length = 527

 Score =  902 bits (2331), Expect = 0.0
 Identities = 461/506 (91%), Positives = 491/506 (97%)
 Frame = +2

Query: 2    ASFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVD 181
            ASF+GA+AIADL+KTTLGPKGMDKILQSTGRG +++VTNDGATILKSLHIDN AAKVLVD
Sbjct: 22   ASFVGAIAIADLVKTTLGPKGMDKILQSTGRGHAVTVTNDGATILKSLHIDNAAAKVLVD 81

Query: 182  ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVI 361
            ISKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTIISG+RMA+ECA +ALLRKV+
Sbjct: 82   ISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIISGYRMAAECARDALLRKVV 141

Query: 362  DNRDDAEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG 541
            DN+ D+EKFKSDLMKIAMTTLSSKILSQDKEHFA+LAVDAVMRLKGSTNLE+IQIIKKPG
Sbjct: 142  DNKADSEKFKSDLMKIAMTTLSSKILSQDKEHFAQLAVDAVMRLKGSTNLEAIQIIKKPG 201

Query: 542  GSLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMARVAQ 721
            GSL DSFLDEGFILDKKIG+GQPKRIENANILVANTAMDTDKVKIYGARVRVDSMA+VA+
Sbjct: 202  GSLIDSFLDEGFILDKKIGLGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMAKVAE 261

Query: 722  IEGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDGIERLALV 901
            IEGAEK+KM+EKVQKIIGHGINCF+NRQLIYNFPEELFADAGILAIEHADFDGIERLALV
Sbjct: 262  IEGAEKDKMREKVQKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALV 321

Query: 902  TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEA 1081
            TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE+GQACTIVLRGAS HVLDEA
Sbjct: 322  TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVELGQACTIVLRGASHHVLDEA 381

Query: 1082 ERSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAFSKALQAI 1261
            ERSLHDALCVLSQTV DSRVLLGGGWPEM+MAKEVDELARKTPGKK+HAIEAFS+AL AI
Sbjct: 382  ERSLHDALCVLSQTVNDSRVLLGGGWPEMIMAKEVDELARKTPGKKSHAIEAFSRALSAI 441

Query: 1262 PTTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKVKQAVLLS 1441
            PT IADNAGLDSAELI+KLRAEH KEG T+GIDVI+G VGDM + GISEAFKVKQAVLLS
Sbjct: 442  PTIIADNAGLDSAELIAKLRAEHQKEGCTSGIDVISGTVGDMAERGISEAFKVKQAVLLS 501

Query: 1442 ATEAAEMILRVDEIISCAPRRREDRM 1519
            ATEAAEMILRVDEII+CAPR+REDRM
Sbjct: 502  ATEAAEMILRVDEIITCAPRKREDRM 527


>ref|XP_003539816.1| PREDICTED: T-complex protein 1 subunit beta-like [Glycine max]
          Length = 527

 Score =  894 bits (2311), Expect = 0.0
 Identities = 463/506 (91%), Positives = 484/506 (95%)
 Frame = +2

Query: 2    ASFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVD 181
            ASF+GAMAIADL+KTTLGPKGMDKILQSTGRGR ++VTNDGATILKSLHIDNPAAKVLVD
Sbjct: 22   ASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVD 81

Query: 182  ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVI 361
            ISKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTIISGFRMA+ECA NALL KV+
Sbjct: 82   ISKVQDDEVGDGTTSVVVLAGELLREAEKLVATKIHPMTIISGFRMAAECARNALLEKVV 141

Query: 362  DNRDDAEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG 541
            DN+ D+EKF+SDL+ IAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG
Sbjct: 142  DNKADSEKFRSDLLNIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPG 201

Query: 542  GSLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMARVAQ 721
            GSL DSFLDEGFILDKKIGIGQPKRIENA ILVANTAMDTDKVKIYGARVRVDSMARVAQ
Sbjct: 202  GSLMDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMARVAQ 261

Query: 722  IEGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDGIERLALV 901
            IE AEKEKM+EKVQKIIGHGINCF+NRQLIYNFPEELFADAGILAIEHADFDGIERLALV
Sbjct: 262  IETAEKEKMREKVQKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALV 321

Query: 902  TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEA 1081
            TGGEIASTFDNPESVKLGHC LIEEIMIGEDKLIHFSGV MGQACTIVLRGAS HVLDEA
Sbjct: 322  TGGEIASTFDNPESVKLGHCDLIEEIMIGEDKLIHFSGVAMGQACTIVLRGASHHVLDEA 381

Query: 1082 ERSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAFSKALQAI 1261
            ERSLHDALCVLSQTV DSRVLLGGGWPEMVMAKEVD LA+KTPGKK+ AIEAFS+AL AI
Sbjct: 382  ERSLHDALCVLSQTVNDSRVLLGGGWPEMVMAKEVDALAKKTPGKKSLAIEAFSRALLAI 441

Query: 1262 PTTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKVKQAVLLS 1441
            PT IADNAGLDSAELIS+LRAEH KEG TAGIDVI+G+VGDM + GI EAFKVKQAVLLS
Sbjct: 442  PTIIADNAGLDSAELISQLRAEHQKEGCTAGIDVISGSVGDMAERGICEAFKVKQAVLLS 501

Query: 1442 ATEAAEMILRVDEIISCAPRRREDRM 1519
            +TEAAEMILRVDEII+CAPRRREDRM
Sbjct: 502  STEAAEMILRVDEIITCAPRRREDRM 527


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