BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002025
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   581   e-164
gb|ABK95931.1| unknown [Populus trichocarpa]                          569   e-160
ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|2...   555   e-156
gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanu...   547   e-153
gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tubero...   547   e-153

>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score =  581 bits (1498), Expect = e-164
 Identities = 290/308 (94%), Positives = 296/308 (96%)
 Frame = +1

Query: 28  SSSGQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 207
           S+SGQ QFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF
Sbjct: 2   STSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 61

Query: 208 VDLNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEA 387
           +DLNQAI MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEA
Sbjct: 62  LDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVEA 121

Query: 388 GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 567
           GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP
Sbjct: 122 GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 181

Query: 568 EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIDGTMQATLGTDGNKKEPE 747
           EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+AI+G  Q  LG DG KKEPE
Sbjct: 182 EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPE 241

Query: 748 SNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALVQYPDVTIAAVAKEA 927
           SNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIA+FEKNGGMQAL+QYPDVT AAVAKEA
Sbjct: 242 SNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEA 301

Query: 928 LEGHCIYD 951
           LEGHCIYD
Sbjct: 302 LEGHCIYD 309



 Score =  102 bits (253), Expect = 2e-19
 Identities = 57/105 (54%), Positives = 69/105 (65%)
 Frame = +1

Query: 352 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 531
           NVLL +IE ++   V++DV+H VFSAFG V KIA FEK  G QALIQ+ D  TA+ A+ A
Sbjct: 243 NVLLASIENMQYA-VTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEA 301

Query: 532 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 666
           L+G  I         G C L +SYS HTDLN+K  S RSRDYT P
Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIP 340


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score =  569 bits (1466), Expect = e-160
 Identities = 280/308 (90%), Positives = 294/308 (95%)
 Frame = +1

Query: 28  SSSGQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 207
           S+SGQ QFRYTQTPSKVLHLRNLPWECTEEEL+ELCKPFG+IVNTKCNVGANRNQAFVEF
Sbjct: 2   STSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGRIVNTKCNVGANRNQAFVEF 61

Query: 208 VDLNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEA 387
           VD NQAIQMVSYYASSS+PAQVRGKTVYIQYSNR EIVNNKS GD  GNVLLVTIEGVEA
Sbjct: 62  VDQNQAIQMVSYYASSSDPAQVRGKTVYIQYSNRHEIVNNKSPGDNPGNVLLVTIEGVEA 121

Query: 388 GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 567
           GDVSIDVIHLVFSAFG++HKIATFEKAAGFQALIQFTD+ETASSARNALDGRSIPRYLLP
Sbjct: 122 GDVSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNALDGRSIPRYLLP 181

Query: 568 EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIDGTMQATLGTDGNKKEPE 747
           EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+AI+G +Q T+G DG KKEPE
Sbjct: 182 EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGPVQPTVGADGKKKEPE 241

Query: 748 SNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALVQYPDVTIAAVAKEA 927
           SNVLLASIENMQYAVT+DVLHTVFSAFGTVQKIA+FEKNGG QAL+QYPDV  AAVAKE 
Sbjct: 242 SNVLLASIENMQYAVTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKET 301

Query: 928 LEGHCIYD 951
           LEGHCIYD
Sbjct: 302 LEGHCIYD 309



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 56/105 (53%), Positives = 68/105 (64%)
 Frame = +1

Query: 352 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 531
           NVLL +IE ++   V+IDV+H VFSAFG V KIA FEK  G QALIQ+ D  TA+ A+  
Sbjct: 243 NVLLASIENMQYA-VTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKET 301

Query: 532 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 666
           L+G  I         G C L +SYS HTDLN+K  S +SRDYT P
Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIP 340


>ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|222867070|gb|EEF04201.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  555 bits (1429), Expect = e-156
 Identities = 278/312 (89%), Positives = 291/312 (93%), Gaps = 4/312 (1%)
 Frame = +1

Query: 28  SSSGQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 207
           S+SGQ QFRYTQTPSKVLHLRNLPWECTEEEL+ELC+PFGKIVNTKCNVG NRNQAFVEF
Sbjct: 2   STSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCEPFGKIVNTKCNVGNNRNQAFVEF 61

Query: 208 VDLNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEA 387
            + NQAIQMVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GD  GNVLLVTIEGVEA
Sbjct: 62  AEQNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDNPGNVLLVTIEGVEA 121

Query: 388 GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIP----R 555
           GDVSIDVIHLVFSAFG+VHKIATFEKAAGFQALIQFTDAETASSARNALDGR+I     R
Sbjct: 122 GDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNALDGRNIMFKKFR 181

Query: 556 YLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIDGTMQATLGTDGNK 735
           YLLPEHVGSC+LRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+AIDG +Q+T+G DG K
Sbjct: 182 YLLPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIDGPVQSTVGADGKK 241

Query: 736 KEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALVQYPDVTIAAV 915
           KEPESNVLLASIENMQYAVTVDVLHTVFS FGTVQKIA+FEKNGG QAL+QYPDV  AAV
Sbjct: 242 KEPESNVLLASIENMQYAVTVDVLHTVFSGFGTVQKIAIFEKNGGTQALIQYPDVATAAV 301

Query: 916 AKEALEGHCIYD 951
           AKE LEGHCIYD
Sbjct: 302 AKETLEGHCIYD 313



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 54/105 (51%), Positives = 67/105 (63%)
 Frame = +1

Query: 352 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 531
           NVLL +IE ++   V++DV+H VFS FG V KIA FEK  G QALIQ+ D  TA+ A+  
Sbjct: 247 NVLLASIENMQYA-VTVDVLHTVFSGFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKET 305

Query: 532 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 666
           L+G  I         G C L +SYS HTDLN+K  S +SRDYT P
Sbjct: 306 LEGHCI------YDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIP 344


>gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
          Length = 442

 Score =  547 bits (1410), Expect = e-153
 Identities = 270/308 (87%), Positives = 287/308 (93%)
 Frame = +1

Query: 28  SSSGQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 207
           S+SGQ QFRYTQTPSKVLHLRNLPW+C++EELVELCKPFGKIVNTKCNVGANRNQAFVEF
Sbjct: 2   STSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEF 61

Query: 208 VDLNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEA 387
            DLNQAI MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEA
Sbjct: 62  ADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEA 121

Query: 388 GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 567
           GDVSIDVIHLVFSAFGFV KIATFEKAAGFQALIQF+D  TAS+AR ALDGRSIP+YLLP
Sbjct: 122 GDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLP 181

Query: 568 EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIDGTMQATLGTDGNKKEPE 747
           EHV  CHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+A++G +Q  +G DG KKEPE
Sbjct: 182 EHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPE 241

Query: 748 SNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALVQYPDVTIAAVAKEA 927
           SNVL AS+ENMQYAVTVDVL+TVFSAFGTVQKIA+FEKNG  QAL+QYPDVTIAA AK+A
Sbjct: 242 SNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301

Query: 928 LEGHCIYD 951
           LEGHCIYD
Sbjct: 302 LEGHCIYD 309



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 50/105 (47%), Positives = 68/105 (64%)
 Frame = +1

Query: 352 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 531
           NVL  ++E ++   V++DV++ VFSAFG V KIA FEK    QALIQ+ D   A++A++A
Sbjct: 243 NVLFASLENMQYA-VTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301

Query: 532 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 666
           L+G  I         G C L +SYS HTDLN++  S +SRDYT P
Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVP 340


>gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum]
          Length = 437

 Score =  547 bits (1410), Expect = e-153
 Identities = 270/308 (87%), Positives = 287/308 (93%)
 Frame = +1

Query: 28  SSSGQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVEF 207
           S+SGQ QFRYTQTPSKVLHLRNLPW+C++EELVELCKPFGKIVNTKCNVGANRNQAFVEF
Sbjct: 2   STSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEF 61

Query: 208 VDLNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSGGDVAGNVLLVTIEGVEA 387
            DLNQAI MVSYYASSSEPAQVRGKTVYIQYSNR EIVNNKS GDV GNVLLVTIEGVEA
Sbjct: 62  ADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEA 121

Query: 388 GDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLP 567
           GDVSIDVIHLVFSAFGFV KIATFEKAAGFQALIQF+D  TAS+AR ALDGRSIP+YLLP
Sbjct: 122 GDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLP 181

Query: 568 EHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIDGTMQATLGTDGNKKEPE 747
           EHV  CHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNP+A++G +Q  +G DG KKEPE
Sbjct: 182 EHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPE 241

Query: 748 SNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALVQYPDVTIAAVAKEA 927
           SNVL AS+ENMQYAVTVDVL+TVFSAFGTVQKIA+FEKNG  QAL+QYPDVTIAA AK+A
Sbjct: 242 SNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301

Query: 928 LEGHCIYD 951
           LEGHCIYD
Sbjct: 302 LEGHCIYD 309



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 50/105 (47%), Positives = 68/105 (64%)
 Frame = +1

Query: 352 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 531
           NVL  ++E ++   V++DV++ VFSAFG V KIA FEK    QALIQ+ D   A++A++A
Sbjct: 243 NVLFASLENMQYA-VTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDA 301

Query: 532 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNP 666
           L+G  I         G C L +SYS HTDLN++  S +SRDYT P
Sbjct: 302 LEGHCI------YDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVP 340