BLASTX nr result

ID: Coptis25_contig00002021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002021
         (1532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22146.3| unnamed protein product [Vitis vinifera]              250   8e-64
ref|XP_002267296.1| PREDICTED: uncharacterized protein LOC100243...   250   8e-64
gb|ABK95689.1| unknown [Populus trichocarpa]                          229   1e-57
ref|XP_002329852.1| predicted protein [Populus trichocarpa] gi|2...   225   2e-56
ref|XP_002509615.1| conserved hypothetical protein [Ricinus comm...   225   3e-56

>emb|CBI22146.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  250 bits (638), Expect = 8e-64
 Identities = 150/299 (50%), Positives = 180/299 (60%), Gaps = 6/299 (2%)
 Frame = -1

Query: 1268 NFGGFGGQQRSLVSSMXXXXXXXXXXXXXXXXXXXXXXXXXPNMFGAPMPSMFGGPSLFG 1089
            +FGGFGG  RSLVSS+                            F  P   MF   SLFG
Sbjct: 99   SFGGFGGH-RSLVSSVFGGRDPFDDP-----------------FFTQPFGGMFES-SLFG 139

Query: 1088 ESPSPAI-----GFIDNRGHPSQGNMSRGPVIEEILSXXXXXXXXXXXXXXXXNTRKHSR 924
               SP +     GF++   H  Q   +RGP+IEE+ S                  RKH R
Sbjct: 140  SRGSPFMAMPGTGFLE---HQVQQPNTRGPIIEELNSDDEKEEEEKKDNP-----RKHRR 191

Query: 923  SGGEVYVEEPDDGGVEDRRIRHMQNRNEFNRMNNGT-QPQTRSFSFHSSNVTYGGPNGAY 747
            S  E YVE+ DD     R+ + MQ RNE+NRM N   QPQ RSFSF SS VTYGG NG Y
Sbjct: 192  SSKEPYVEDADDEA-SGRKSKQMQYRNEYNRMTNTQPQPQPRSFSFTSSTVTYGGTNGPY 250

Query: 746  YTSSTTRNIGDNGVMIEEKKEADSTTRKAEHRVSKGIRDKGHTVTRKLNPDGKVDTMQTL 567
            YTSSTTR  G +G+  EE KEAD+TTR+A HRVS+GIR+KGH+VTRKLN DG+VDTMQ L
Sbjct: 251  YTSSTTRRTGSDGLTFEESKEADTTTRQAAHRVSRGIRNKGHSVTRKLNSDGQVDTMQAL 310

Query: 566  HNLDEDELAGFQETWKGNARKNLPGWTEGNDVYENIGPSSSRPQGQASRHGWALPSVEQ 390
            HNL+E+EL+GF+E W+GNA+K LPGW E  +  +NIG  SS   GQA+R GWALPS E+
Sbjct: 311  HNLNENELSGFEEAWQGNAKKYLPGWNERFNGLDNIGHGSSGQTGQANRGGWALPSTER 369


>ref|XP_002267296.1| PREDICTED: uncharacterized protein LOC100243132 [Vitis vinifera]
          Length = 329

 Score =  250 bits (638), Expect = 8e-64
 Identities = 150/299 (50%), Positives = 180/299 (60%), Gaps = 6/299 (2%)
 Frame = -1

Query: 1268 NFGGFGGQQRSLVSSMXXXXXXXXXXXXXXXXXXXXXXXXXPNMFGAPMPSMFGGPSLFG 1089
            +FGGFGG  RSLVSS+                            F  P   MF   SLFG
Sbjct: 21   SFGGFGGH-RSLVSSVFGGRDPFDDP-----------------FFTQPFGGMFES-SLFG 61

Query: 1088 ESPSPAI-----GFIDNRGHPSQGNMSRGPVIEEILSXXXXXXXXXXXXXXXXNTRKHSR 924
               SP +     GF++   H  Q   +RGP+IEE+ S                  RKH R
Sbjct: 62   SRGSPFMAMPGTGFLE---HQVQQPNTRGPIIEELNSDDEKEEEEKKDNP-----RKHRR 113

Query: 923  SGGEVYVEEPDDGGVEDRRIRHMQNRNEFNRMNNGT-QPQTRSFSFHSSNVTYGGPNGAY 747
            S  E YVE+ DD     R+ + MQ RNE+NRM N   QPQ RSFSF SS VTYGG NG Y
Sbjct: 114  SSKEPYVEDADDEA-SGRKSKQMQYRNEYNRMTNTQPQPQPRSFSFTSSTVTYGGTNGPY 172

Query: 746  YTSSTTRNIGDNGVMIEEKKEADSTTRKAEHRVSKGIRDKGHTVTRKLNPDGKVDTMQTL 567
            YTSSTTR  G +G+  EE KEAD+TTR+A HRVS+GIR+KGH+VTRKLN DG+VDTMQ L
Sbjct: 173  YTSSTTRRTGSDGLTFEESKEADTTTRQAAHRVSRGIRNKGHSVTRKLNSDGQVDTMQAL 232

Query: 566  HNLDEDELAGFQETWKGNARKNLPGWTEGNDVYENIGPSSSRPQGQASRHGWALPSVEQ 390
            HNL+E+EL+GF+E W+GNA+K LPGW E  +  +NIG  SS   GQA+R GWALPS E+
Sbjct: 233  HNLNENELSGFEEAWQGNAKKYLPGWNERFNGLDNIGHGSSGQTGQANRGGWALPSTER 291


>gb|ABK95689.1| unknown [Populus trichocarpa]
          Length = 372

 Score =  229 bits (584), Expect = 1e-57
 Identities = 129/262 (49%), Positives = 162/262 (61%), Gaps = 5/262 (1%)
 Frame = -1

Query: 1142 NMFGAPMPSMFGGP-SLFGESPSPAI---GFIDNRGHPSQGNMSRGPVIEEILSXXXXXX 975
            NM  +P P+M   P      SP P +   GF D++    +   SRGP+IEE+ S      
Sbjct: 81   NMHPSPFPNMLPSPFPNMHPSPFPNLHPSGFADHQA--PELKKSRGPIIEELDSDNEKGE 138

Query: 974  XXXXXXXXXXNTRKHSRSGGEVYVEEPDDGGVEDRRIRHMQNRNEFNRMNN-GTQPQTRS 798
                        RKH RS  E YVE+PDD   E R+ +H+Q  N+++  N   +QPQ RS
Sbjct: 139  GDREKKENP---RKHGRSSKEPYVEDPDDEA-EARKSKHLQYSNDYSSFNGMESQPQGRS 194

Query: 797  FSFHSSNVTYGGPNGAYYTSSTTRNIGDNGVMIEEKKEADSTTRKAEHRVSKGIRDKGHT 618
            F+F SS VT+GG NGAYYTSS TR  G +G+  EE K ADS T +A H+VS+G+ +KGH+
Sbjct: 195  FTFQSSTVTHGGANGAYYTSSKTRRAGSDGLTFEESKAADSATGQATHKVSRGLHNKGHS 254

Query: 617  VTRKLNPDGKVDTMQTLHNLDEDELAGFQETWKGNARKNLPGWTEGNDVYENIGPSSSRP 438
            +TRKLN DG+V+TMQ LHNL+EDEL GF+E WKGNA K+LPGWT      +NIG S S  
Sbjct: 255  LTRKLNSDGRVNTMQMLHNLNEDELTGFEEAWKGNAGKHLPGWTGSFTGIDNIGASRSGQ 314

Query: 437  QGQASRHGWALPSVEQPSAPNR 372
              QASR GWALPS EQ     R
Sbjct: 315  NTQASRGGWALPSAEQSQHSGR 336


>ref|XP_002329852.1| predicted protein [Populus trichocarpa] gi|222871089|gb|EEF08220.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  225 bits (574), Expect = 2e-56
 Identities = 129/264 (48%), Positives = 163/264 (61%), Gaps = 7/264 (2%)
 Frame = -1

Query: 1142 NMFGAPMPSMFGGP-SLFGESPSPAI---GFIDNRGHPSQGNMSRGPVIEEILSXXXXXX 975
            NM  +P P+M   P      SP P +   GF D++    +   SRGP+IEE+ S      
Sbjct: 81   NMHPSPFPNMLPSPFPNMHPSPFPNLHPSGFADHQA--PELKKSRGPIIEELDSDNEKGE 138

Query: 974  XXXXXXXXXXNTRKHSRSGGEVYVEEPDDGGVEDRRIRHMQNRNEFNRMNN-GTQPQTRS 798
                        RKH RS  E YVE+PDD   E R+ +H+Q  N+++  N   +QPQ RS
Sbjct: 139  GDREKKENP---RKHGRSTKEPYVEDPDDEA-EARKSKHLQYSNDYSSFNGMESQPQGRS 194

Query: 797  FSFHSSNVTYGGPNGAYYTSSTTRNIGDNGVMIEEKKEADSTTRKAEHRVSKGIRDKGHT 618
            F+F SS VT+GG NGAYYTSS TR  G +G+  EE K ADS T +A H+VS+G+ +KGH+
Sbjct: 195  FTFQSSTVTHGGANGAYYTSSKTRRAGSDGLTFEESKAADSATGQATHKVSRGLHNKGHS 254

Query: 617  VTRKLNPDGKVDTMQTLHNLDEDELAGFQETWKGNARKNLPGWTEGNDVYENIGPSSSR- 441
            +TRKLN DG+V+TMQ LHNL+EDEL GF+E WKGNA K+LPGWT      +NIG  +SR 
Sbjct: 255  LTRKLNSDGRVNTMQMLHNLNEDELTGFEEAWKGNAGKHLPGWTGSFTGIDNIGTGASRS 314

Query: 440  -PQGQASRHGWALPSVEQPSAPNR 372
                QASR GWALPS EQ     R
Sbjct: 315  GQNTQASRGGWALPSAEQSQHSGR 338


>ref|XP_002509615.1| conserved hypothetical protein [Ricinus communis]
            gi|223549514|gb|EEF51002.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 342

 Score =  225 bits (573), Expect = 3e-56
 Identities = 135/295 (45%), Positives = 168/295 (56%), Gaps = 6/295 (2%)
 Frame = -1

Query: 1259 GFGGQQRSLVSSMXXXXXXXXXXXXXXXXXXXXXXXXXPNMFGAPMPSMFGGPSLFGESP 1080
            GFGG  RSL+S                              F  P   MF   S FG + 
Sbjct: 27   GFGGVHRSLMSGFFGGRDPFDDP-----------------FFTRPFGGMFES-SFFGSNG 68

Query: 1079 SPAIG-----FIDNRGHPSQGNMSRGPVIEEILSXXXXXXXXXXXXXXXXNTRKHSRSGG 915
            SP        F++++      N SRGP+IEE+ S                  RKH R   
Sbjct: 69   SPLASMHPSPFVEHQALEPPRN-SRGPIIEELNSDDDKEEADKGKKENP---RKHGRPSK 124

Query: 914  EVYVEEPDDGGVEDRRIRHMQNRNEFNRMNN-GTQPQTRSFSFHSSNVTYGGPNGAYYTS 738
            E YVE+PDD   E+R+ +H+Q R+  NR N    QPQTRSF+F SS VTYGG NGAYYTS
Sbjct: 125  EPYVEDPDDEA-EERKSKHLQYRSSHNRFNGMEQQPQTRSFTFQSSTVTYGGANGAYYTS 183

Query: 737  STTRNIGDNGVMIEEKKEADSTTRKAEHRVSKGIRDKGHTVTRKLNPDGKVDTMQTLHNL 558
            S +R  G +G+ +EE KEAD++TRKA HR+S+G+ +KGHT+TR LN DGKV+TMQTLHNL
Sbjct: 184  SKSRRAGSDGLTVEESKEADTSTRKASHRISRGLHNKGHTLTRNLNSDGKVETMQTLHNL 243

Query: 557  DEDELAGFQETWKGNARKNLPGWTEGNDVYENIGPSSSRPQGQASRHGWALPSVE 393
             EDELA F E WK NAR+ LPGWT     ++++G SSS     AS  GWALP+ E
Sbjct: 244  HEDELADFGEVWKQNARQALPGWTGNFSGHDSMGASSS--GRNASMGGWALPATE 296


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