BLASTX nr result

ID: Coptis25_contig00002018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002018
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239684.1| uncharacterized protein LOC100800268 [Glycin...   292   1e-76
ref|XP_002532255.1| sentrin/sumo-specific protease, senp8, putat...   288   2e-75
emb|CBI16253.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_004149559.1| PREDICTED: NEDD8-specific protease 1-like [C...   271   3e-70
ref|XP_003606504.1| Sentrin-specific protease [Medicago truncatu...   270   7e-70

>ref|NP_001239684.1| uncharacterized protein LOC100800268 [Glycine max]
           gi|255647402|gb|ACU24166.1| unknown [Glycine max]
          Length = 228

 Score =  292 bits (747), Expect = 1e-76
 Identities = 139/227 (61%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
 Frame = -2

Query: 941 MDLSMGDEKILSYSDVVLRRSDLEILGGPHFLNDRIIEFYFSCLASCYPSEDILLVPPGI 762
           M  S  DEKILSY+DVVLRRSDL IL GP+FLNDRIIEFYFS L+SC+PS+DILLVPP I
Sbjct: 1   MRKSKADEKILSYNDVVLRRSDLHILSGPYFLNDRIIEFYFSYLSSCHPSQDILLVPPSI 60

Query: 761 SFWLTNCMDLDSLKDFVEPLKLPDKKLVIFSINNNKDVTQAEGGTHWSLLAYERNKNLFV 582
           +FW+  C   ++L DF+EPL LPDK LVIF +N+N DV +AEGG+HWSLLAY RN NLFV
Sbjct: 61  AFWIIQCPVAEALGDFIEPLHLPDKTLVIFPVNDNDDVDRAEGGSHWSLLAYYRNANLFV 120

Query: 581 HHDSLAGSNRLPAMNLYRNVARFMRISGSTLDAPLSDCTSTPQQMNGYDCGVYVIAIAKV 402
           HHDS    N  PA  LY+ +A +M  SGS  +A   +CT++P Q NGYDCG+Y  AIA+V
Sbjct: 121 HHDSCRSMNAAPAKQLYKGIAGYMGSSGSASEASFLECTNSPMQDNGYDCGLYATAIARV 180

Query: 401 ICDWYTNCRSQD-EDLWFSAMKRQIGASTVSKLRNEILVLIKDLMVK 264
           IC+W+ N ++ D  DLWFSA+K Q+  S V+ +R EIL LI+DLM +
Sbjct: 181 ICNWHVNHKNADTNDLWFSAVKEQVSPSAVASMRGEILALIRDLMAR 227


>ref|XP_002532255.1| sentrin/sumo-specific protease, senp8, putative [Ricinus communis]
           gi|223528043|gb|EEF30121.1| sentrin/sumo-specific
           protease, senp8, putative [Ricinus communis]
          Length = 228

 Score =  288 bits (737), Expect = 2e-75
 Identities = 137/228 (60%), Positives = 177/228 (77%), Gaps = 1/228 (0%)
 Frame = -2

Query: 941 MDLSMGDEKILSYSDVVLRRSDLEILGGPHFLNDRIIEFYFSCLASCYPSEDILLVPPGI 762
           M  S  DEKILSY+DVVLRRSDL+IL GP+FLNDRIIEFYFS L+S +PSEDI+L+ P +
Sbjct: 1   MGKSGADEKILSYNDVVLRRSDLDILNGPYFLNDRIIEFYFSYLSSSHPSEDIILLSPSV 60

Query: 761 SFWLTNCMDLDSLKDFVEPLKLPDKKLVIFSINNNKDVTQAEGGTHWSLLAYERNKNLFV 582
           +FW++NC+D +SLKDF+EPLKLPDKKLV+F +NNN+DV  AEGG+HWSLL YER+ N+FV
Sbjct: 61  AFWISNCLDTESLKDFLEPLKLPDKKLVMFPVNNNEDVNLAEGGSHWSLLVYERSCNVFV 120

Query: 581 HHDSLAGSNRLPAMNLYRNVARFMRISGSTLDAPLSDCTSTPQQMNGYDCGVYVIAIAKV 402
           HHDS +G+N+  A+ LY+ VAR++  S +T  A   D   +PQQ+NGYDCG+YV AIA  
Sbjct: 121 HHDSYSGTNKRHALQLYKAVARYIGTSDATAHAKYMDLNDSPQQVNGYDCGLYVTAIAGA 180

Query: 401 ICDWYTNCRSQDED-LWFSAMKRQIGASTVSKLRNEILVLIKDLMVKK 261
           IC W  +C  ++ D LWFS +K Q+  + V+ +R EIL LI+ LMV K
Sbjct: 181 ICYWNESCDRKERDCLWFSVVKEQVTPAAVAAMRTEILSLIRSLMVSK 228


>emb|CBI16253.3| unnamed protein product [Vitis vinifera]
          Length = 222

 Score =  271 bits (694), Expect = 2e-70
 Identities = 137/223 (61%), Positives = 161/223 (72%)
 Frame = -2

Query: 941 MDLSMGDEKILSYSDVVLRRSDLEILGGPHFLNDRIIEFYFSCLASCYPSEDILLVPPGI 762
           M  S  D+ ILSY+DVVLRRSDL+IL GPHFLNDR+IEFYFS L SCYPS DI LVPP I
Sbjct: 1   MGKSWADDMILSYNDVVLRRSDLDILSGPHFLNDRLIEFYFSYLTSCYPSPDISLVPPSI 60

Query: 761 SFWLTNCMDLDSLKDFVEPLKLPDKKLVIFSINNNKDVTQAEGGTHWSLLAYERNKNLFV 582
           +FW+ NC D  SL+DF+EPLKL +KKLVIF INNN DV QAEGGTHWSLLA+E N N+FV
Sbjct: 61  AFWIMNCPDTGSLRDFIEPLKLSEKKLVIFPINNNDDVEQAEGGTHWSLLAFEENANVFV 120

Query: 581 HHDSLAGSNRLPAMNLYRNVARFMRISGSTLDAPLSDCTSTPQQMNGYDCGVYVIAIAKV 402
           HHDS  G N   A  LY+ V  FM  S S+  A   +C  +PQQ N YDCG+YV A AK 
Sbjct: 121 HHDSCGGLNEAHARKLYKAVVGFMGNSNSS-RAQYLECKDSPQQANCYDCGLYVAATAKA 179

Query: 401 ICDWYTNCRSQDEDLWFSAMKRQIGASTVSKLRNEILVLIKDL 273
           IC WY       E LWFS +K Q+ +S V+ LR+E+L LI++L
Sbjct: 180 ICCWY-GSGQPGEGLWFSVVKEQLTSSVVADLRSEMLGLIRNL 221


>ref|XP_004149559.1| PREDICTED: NEDD8-specific protease 1-like [Cucumis sativus]
           gi|449533234|ref|XP_004173581.1| PREDICTED:
           NEDD8-specific protease 1-like [Cucumis sativus]
          Length = 236

 Score =  271 bits (692), Expect = 3e-70
 Identities = 137/229 (59%), Positives = 167/229 (72%), Gaps = 2/229 (0%)
 Frame = -2

Query: 941 MDLSMGDEKILSYSDVVLRRSDLEILGGPHFLNDRIIEFYFSCLASCYPSEDILLVPPGI 762
           M  S GDEKILSY+DVVLR+SDLEIL GP+FLNDRIIEFYFS L++ +PS  ILL PP I
Sbjct: 1   MGKSEGDEKILSYNDVVLRKSDLEILSGPYFLNDRIIEFYFSYLSTTHPSNGILLSPPSI 60

Query: 761 SFWLTNCMDLDSLKDFVEPLKLPDKKLVIFSINNNKDVTQAEGGTHWSLLAYERNKNLFV 582
           +FW+ NC D++SL  F+EPL LP KKLVIF +N+N DV++ EGG HWSLLA+ R  N+FV
Sbjct: 61  AFWMMNCPDVESLNSFLEPLNLPHKKLVIFPVNDNIDVSKPEGGNHWSLLAFYREANIFV 120

Query: 581 HHDSLAGSNRLPAMNLYRNVARFMRI-SGSTLDAPLSDCTSTPQQMNGYDCGVYVIAIAK 405
           HHDS  G N+  A  LY  VARFM   S STL+    +C  +PQQ+NGYDCGVYV AIA+
Sbjct: 121 HHDSNKGMNKYAAKRLYNAVARFMNDGSISTLNPSYVECVESPQQVNGYDCGVYVTAIAR 180

Query: 404 VICDWYTNCRSQDED-LWFSAMKRQIGASTVSKLRNEILVLIKDLMVKK 261
            IC WY   R  ++D LWFSA+  +I  S V+ +R EIL LI+ LM  K
Sbjct: 181 SICKWYEERREVEKDGLWFSAVVEEISPSLVANMRREILGLIRSLMAVK 229


>ref|XP_003606504.1| Sentrin-specific protease [Medicago truncatula]
           gi|355507559|gb|AES88701.1| Sentrin-specific protease
           [Medicago truncatula]
          Length = 236

 Score =  270 bits (689), Expect = 7e-70
 Identities = 132/228 (57%), Positives = 168/228 (73%), Gaps = 2/228 (0%)
 Frame = -2

Query: 941 MDLSMGDEKILSYSDVVLRRSDLEILGGPHFLNDRIIEFYFSCLASCYPSEDILLVPPGI 762
           M  S  D+KILSY+DVVLRRSDL IL GP+FLNDRIIEF+ S L+S +PS+DILLVPP I
Sbjct: 1   MGKSEADDKILSYNDVVLRRSDLGILSGPYFLNDRIIEFHLSYLSSSHPSQDILLVPPSI 60

Query: 761 SFWLTNCMDLDSLKDFVEPLKLPDKKLVIFSINNNKDVTQAEGGTHWSLLAYERNKNLFV 582
           +FW+  C  +++LKDF++PL L DKKLV+F INNN DV  +EGG+HWSLLAY RN N+FV
Sbjct: 61  AFWIIQCPVVEALKDFLDPLHLSDKKLVLFPINNNDDVNISEGGSHWSLLAYYRNANVFV 120

Query: 581 HHDSLAGSNRLPAMNLYRNVARFMRISGSTLDAPLSDCTSTPQQMNGYDCGVYVIAIAKV 402
           HHDS    N  PA  LY+ V  +M +S S   A   + T +P+Q NGYDCG+YV AIA+V
Sbjct: 121 HHDSCRSMNATPAKKLYKAVVGYMGLSESGSKAGYLEWTDSPRQANGYDCGLYVTAIARV 180

Query: 401 ICDWYTNC--RSQDEDLWFSAMKRQIGASTVSKLRNEILVLIKDLMVK 264
           IC+WY N   ++   DLWFS +K Q+  S V+ +R+EIL LI+DLM +
Sbjct: 181 ICEWYVNSSKKTDANDLWFSVVKEQVTPSAVACMRSEILALIRDLMAR 228


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