BLASTX nr result

ID: Coptis25_contig00001988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001988
         (1767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623159.1| hypothetical protein MTR_7g065150 [Medicago ...    97   2e-17
ref|XP_002275314.1| PREDICTED: uncharacterized protein LOC100252...    93   2e-16
ref|XP_004147915.1| PREDICTED: uncharacterized protein LOC101215...    92   6e-16
ref|XP_002281905.1| PREDICTED: uncharacterized protein LOC100263...    91   1e-15
ref|XP_002311193.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-15

>ref|XP_003623159.1| hypothetical protein MTR_7g065150 [Medicago truncatula]
           gi|355498174|gb|AES79377.1| hypothetical protein
           MTR_7g065150 [Medicago truncatula]
           gi|388492720|gb|AFK34426.1| unknown [Medicago
           truncatula]
          Length = 156

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +3

Query: 9   SQTTGGQGQNASNRGQSSIFQDERVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKD 188
           S+   G+ QN +N+  S I+Q++RV+P +LSSSI+YG QDVYS   + R S     YKKD
Sbjct: 76  SKGNDGETQNKTNKDMSYIYQEQRVQPCHLSSSIYYGGQDVYSRPQSARDSGLNTMYKKD 135

Query: 189 GENDDPDGSASRGNWWQGSLYY 254
           G  DD  GSASRGNWWQGSLYY
Sbjct: 136 GGEDD-SGSASRGNWWQGSLYY 156


>ref|XP_002275314.1| PREDICTED: uncharacterized protein LOC100252790 isoform 1 [Vitis
           vinifera] gi|359481721|ref|XP_003632663.1| PREDICTED:
           uncharacterized protein LOC100252790 isoform 2 [Vitis
           vinifera] gi|297740289|emb|CBI30471.3| unnamed protein
           product [Vitis vinifera]
          Length = 159

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 45/84 (53%), Positives = 58/84 (69%)
 Frame = +3

Query: 3   NASQTTGGQGQNASNRGQSSIFQDERVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYK 182
           NA Q + G+ Q+ SNR   S +Q++RV+P +LSSSI+YG QD+Y +   ++SS      K
Sbjct: 77  NALQQSEGESQSISNRDTGSFYQEQRVQPCHLSSSIYYGGQDIYFHPQNSQSSGMPSMLK 136

Query: 183 KDGENDDPDGSASRGNWWQGSLYY 254
           KD   DD  GSASRGNWWQGSLYY
Sbjct: 137 KDSGEDD-TGSASRGNWWQGSLYY 159


>ref|XP_004147915.1| PREDICTED: uncharacterized protein LOC101215701 [Cucumis sativus]
          Length = 158

 Score = 91.7 bits (226), Expect = 6e-16
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +3

Query: 18  TGGQGQNASNRGQSSIFQDERVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGEN 197
           T  + Q   N+  SSI+QD+R +P +LSSSI+YG QDVY++   + +S     YKK+G  
Sbjct: 81  TQKESQETKNKDMSSIYQDQRAQPCHLSSSIYYGGQDVYTHPQNSYNSGANSAYKKEGGE 140

Query: 198 DDPDGSASRGNWWQGSLYY 254
           DD  GSASRGNWWQGSLYY
Sbjct: 141 DD-SGSASRGNWWQGSLYY 158


>ref|XP_002281905.1| PREDICTED: uncharacterized protein LOC100263768 [Vitis vinifera]
           gi|297745986|emb|CBI16042.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 8/86 (9%)
 Frame = +3

Query: 21  GGQGQNAS----NRGQSSIFQDERVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKD 188
           G  G  AS    N+ ++ IFQ+ERVEP +LSSS++YG QD+YSN S+T++S     +KKD
Sbjct: 71  GKSGVGASSIIPNKDKNQIFQEERVEPCHLSSSLYYGGQDIYSNSSSTQTSGSYPVFKKD 130

Query: 189 GENDDPDGS----ASRGNWWQGSLYY 254
              DDP+G+    ASRGNWWQGSLYY
Sbjct: 131 --EDDPNGNNSQGASRGNWWQGSLYY 154


>ref|XP_002311193.1| predicted protein [Populus trichocarpa] gi|222851013|gb|EEE88560.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
 Frame = +3

Query: 3   NASQTTGGQGQNASNRGQSSIFQDERVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYK 182
           NA++   G+    S +GQSS++Q+E  EP Y SSSI+YG Q+ YS +  T++S     +K
Sbjct: 65  NATRKAKGESSGISGKGQSSVYQNETPEPCYFSSSIYYGGQENYSPR--TKNSESQHVFK 122

Query: 183 KDGENDDPDG----SASRGNWWQGSLYY 254
           KD   DDP+G    SASRGNWWQGSLYY
Sbjct: 123 KDYGKDDPNGNDPNSASRGNWWQGSLYY 150


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