BLASTX nr result

ID: Coptis25_contig00001987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001987
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282406.1| PREDICTED: uncharacterized protein LOC100259...   120   1e-25
dbj|BAC42906.1| unknown protein [Arabidopsis thaliana]                119   2e-25
ref|XP_002312530.1| predicted protein [Populus trichocarpa] gi|1...   119   2e-25
ref|XP_002517138.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|NP_563737.1| LOW PSII accumulation 19 protein [Arabidopsis t...   118   4e-25

>ref|XP_002282406.1| PREDICTED: uncharacterized protein LOC100259756 isoform 1 [Vitis
           vinifera] gi|297737050|emb|CBI26251.3| unnamed protein
           product [Vitis vinifera]
          Length = 209

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/79 (75%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   PKNYLKTAREVVNALRESLKEDPRDNAKFRRTADAAKEAIREYLNDWRGQKQVETEESYV 180
           PK YL +AREVV  LRESLKEDP+D AKFRRTADAAKE+IREYL+ WRG++ V +EESY 
Sbjct: 109 PKAYLNSAREVVKTLRESLKEDPKDIAKFRRTADAAKESIREYLSSWRGKQTVVSEESYA 168

Query: 181 ALVKAIRSLASFYSKSGPS 237
            L KAIRSLASFYSK+GPS
Sbjct: 169 MLEKAIRSLASFYSKAGPS 187


>dbj|BAC42906.1| unknown protein [Arabidopsis thaliana]
          Length = 199

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/79 (73%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   PKNYLKTAREVVNALRESLKEDPRDNAKFRRTADAAKEAIREYLNDWRGQKQVETEESYV 180
           PK YLK+AREVV  +RESLKE+PRDNAKFRR+ADAAKE+IR+YL++WRGQK V  EESYV
Sbjct: 99  PKAYLKSAREVVKTMRESLKENPRDNAKFRRSADAAKESIRDYLSNWRGQKTVAGEESYV 158

Query: 181 ALVKAIRSLASFYSKSGPS 237
            L   IR+LA FYSK+GPS
Sbjct: 159 ELENVIRALAKFYSKAGPS 177


>ref|XP_002312530.1| predicted protein [Populus trichocarpa] gi|118485936|gb|ABK94813.1|
           unknown [Populus trichocarpa]
           gi|222852350|gb|EEE89897.1| predicted protein [Populus
           trichocarpa]
          Length = 204

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/79 (77%), Positives = 67/79 (84%)
 Frame = +1

Query: 1   PKNYLKTAREVVNALRESLKEDPRDNAKFRRTADAAKEAIREYLNDWRGQKQVETEESYV 180
           PK YLK AREVV  LRESLKED +D AKFRRTADAAKE+IREYL  WRGQ++V  EESYV
Sbjct: 104 PKAYLKAAREVVKNLRESLKEDTKDIAKFRRTADAAKESIREYLGSWRGQEKVVREESYV 163

Query: 181 ALVKAIRSLASFYSKSGPS 237
            L KAIRSLASFYS++GPS
Sbjct: 164 ELEKAIRSLASFYSRAGPS 182


>ref|XP_002517138.1| conserved hypothetical protein [Ricinus communis]
           gi|223543773|gb|EEF45301.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/79 (73%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   PKNYLKTAREVVNALRESLKEDPRDNAKFRRTADAAKEAIREYLNDWRGQKQVETEESYV 180
           PK YLK+AR+VV  LR+SLKEDP+D  +FRRTADAAKE+IREYL  WRGQ++V  EESY+
Sbjct: 104 PKAYLKSARDVVKTLRDSLKEDPKDVTQFRRTADAAKESIREYLGSWRGQEKVVREESYI 163

Query: 181 ALVKAIRSLASFYSKSGPS 237
            L KAIRSLASFYSK+GPS
Sbjct: 164 ELEKAIRSLASFYSKAGPS 182


>ref|NP_563737.1| LOW PSII accumulation 19 protein [Arabidopsis thaliana]
           gi|8778732|gb|AAF79740.1|AC005106_21 T25N20.4
           [Arabidopsis thaliana]
           gi|13877959|gb|AAK44057.1|AF370242_1 unknown protein
           [Arabidopsis thaliana] gi|23296694|gb|AAN13149.1|
           unknown protein [Arabidopsis thaliana]
           gi|332189712|gb|AEE27833.1| LOW PSII accumulation 19
           protein [Arabidopsis thaliana]
          Length = 199

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/79 (72%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   PKNYLKTAREVVNALRESLKEDPRDNAKFRRTADAAKEAIREYLNDWRGQKQVETEESYV 180
           PK YLK+AREVV  +RESLKE+P+DNAKFRR+ADAAKE+IR+YL++WRGQK V  EESYV
Sbjct: 99  PKAYLKSAREVVKTMRESLKENPKDNAKFRRSADAAKESIRDYLSNWRGQKTVAGEESYV 158

Query: 181 ALVKAIRSLASFYSKSGPS 237
            L   IR+LA FYSK+GPS
Sbjct: 159 ELENVIRALAKFYSKAGPS 177


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