BLASTX nr result
ID: Coptis25_contig00001982
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001982
(1669 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g... 129 2e-27
ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2... 127 9e-27
ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|2... 125 3e-26
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g... 120 8e-25
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2... 120 1e-24
>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
gi|222861279|gb|EEE98821.1| f-box family protein [Populus
trichocarpa]
Length = 422
Score = 129 bits (325), Expect = 2e-27
Identities = 104/321 (32%), Positives = 148/321 (46%), Gaps = 35/321 (10%)
Frame = -1
Query: 1240 LPSDIILHILCRIPIKSLSSQCRWVCRTWFNLICHPRFAEIHYEWAIQNCCSPCVVLHNS 1061
LP +I IL R+PI SL Q + VCR W L+ P+ +++ + Q+ PC++LH
Sbjct: 28 LPREIAHDILSRLPITSLV-QFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHC- 85
Query: 1060 GGDFGLVDHQVFDNLETSAPVHYLEFLREPEFVERL-----------EVIGFVNGLLCFS 914
DF + ++ F V + E E V+R+ EV+G NGLLC S
Sbjct: 86 --DFPIRNNLYF--------VDFAAHEEEKEKVKRIPAPFSSMMPEFEVVGSCNGLLCLS 135
Query: 913 EEFYRCSYPVFYYVCNPITGEHLSLPRASELL-RVTACGFGFDSITNEYKVCRFYYDRKG 737
+ Y S Y+ NP TG + LP++ + + GFGF+ T EYKV R Y R G
Sbjct: 136 DSLYNDSL----YIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNG 191
Query: 736 G----------------EVFTLGSSRWRWIENSLPRSTY-----GNGKHVNNHLHWTSRG 620
++ TLG WR SL + +Y +G VN LHW SR
Sbjct: 192 HGGYPRSRRIIYPLSEVQILTLGCPEWR----SLGKVSYRLVRRASGALVNGRLHWISRP 247
Query: 619 --HGESFTIVAFDMAAEEIHEIGPPPLLGLDNVVLGRDICLFLGVIKERLCLFCDRELDH 446
+ + +V+FD+ E+ E+ P GL+ C + V+ R CL ++
Sbjct: 248 CRNKPARRLVSFDLTDEQFREVSKPDCGGLNR-------CNYHLVVL-RGCLSAAVYCNY 299
Query: 445 SYYEIWVMKEYGVHGSWAKEY 383
EIWVMKEY V SW KEY
Sbjct: 300 GRLEIWVMKEYNVKESWVKEY 320
>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
predicted protein [Populus trichocarpa]
Length = 452
Score = 127 bits (319), Expect = 9e-27
Identities = 111/383 (28%), Positives = 178/383 (46%), Gaps = 23/383 (6%)
Frame = -1
Query: 1252 LFSKLPSDIILHILCRIPIKSLSSQCRWVCRTWFNLICHPRFAEIHYEWAIQNCCSPCVV 1073
L +KLPS +I+ IL R+PIK++ + CR VC+TW + I FA++H E + + +
Sbjct: 24 LMNKLPSCLIMDILSRLPIKTILN-CRCVCKTWLHYISDSFFAKLHLERSPTSLLVKTIS 82
Query: 1072 LHNSGGDFGLVDHQVFDNLETSAPVHY-LEFLREPEFVERLE--------VIGFVNGLLC 920
+ LV T PV + E +FV+ + + NGLLC
Sbjct: 83 NNPESRSVQLVQI-------TGKPVGLRFRVVEEMKFVQEINLPYNNDFLIENSCNGLLC 135
Query: 919 FSEEFYRCSYPVFYYVCNPITGEHLSLPRASE--LLRVTACGFGFDSITNEYKVCRFYYD 746
S+ F S+ Y +CNPI GE++S+P A+ + G+ +IT EYKV +Y
Sbjct: 136 ISKTFQDGSHDDIY-LCNPILGEYISIPLAAGQGTRHKRSFSLGYSAITKEYKVLHTFYS 194
Query: 745 RKG------GEVFTLGSSRWRWIENSLP-RSTYGNGKHVNNHLHWTSRGHGESF-TIVAF 590
+KG E++T+G+ +WR I +L + V +HW RG +I +F
Sbjct: 195 KKGPDSQPEAEIYTIGTGKWRSIHKALHILDIFMFDSFVCGSIHWELRGEDNCVNSIGSF 254
Query: 589 DMAAEEIHEIGPPPLLGLDNVVLGR-DICLFLGVIKERLCLFCDRELDHSYYEIWVMKEY 413
+ E+ ++ PP V L + CL GV C C+ + +EIWVMKEY
Sbjct: 255 NFENEQFSQLSLPPRYDEGGVTLTVFEGCL--GVSFFNTC--CETQ-----FEIWVMKEY 305
Query: 412 GVHGSWAKEYLFPKVALFWSFNSFSLFQFWNDEFLVPGSNNLGY--YDLKEETCRPI-VV 242
G SW K++ + N + F N+ ++ N+ + YD + + + I +
Sbjct: 306 GNKQSWTKQFTVKNLGF---ENHYQPLIFLNNGLILMMDNHERFVIYDTRRKFMKVIRIC 362
Query: 241 EVNGSFSSIFLVGSLFSPKNVGR 173
+ GS +I S S K+VG+
Sbjct: 363 QTRGSKYAIAYKPSFVSLKDVGK 385
>ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|222860057|gb|EEE97604.1|
predicted protein [Populus trichocarpa]
Length = 411
Score = 125 bits (314), Expect = 3e-26
Identities = 92/348 (26%), Positives = 166/348 (47%), Gaps = 13/348 (3%)
Frame = -1
Query: 1267 EMSGELFSKLPSDIILHILCRIPIKSLSSQCRWVCRTWFNLICHPRFAEIHYEWAIQNCC 1088
E S L ++LP+ +I+ IL R+PI+ L + C+ VC+TW +L+ P F +H E +
Sbjct: 30 EQSKCLVAELPNALIIDILSRLPIRPLLN-CKSVCKTWLHLMSDPSFVRLHLERSPTTLL 88
Query: 1087 SPCVVLHNSGGDFGLVDHQVFDNLETSAPVHYLEFLREPEFVER-LEVIGFVNGLLCFSE 911
L+ V +++ + + F + + ++ NGLLC E
Sbjct: 89 IQKTPFERKESTEMLLVEIVEEDISKPFYIEIIRLFPTKNFPDTDVRILNSCNGLLCLYE 148
Query: 910 EFYRCSYPVFYYVCNPITGEHLSLPRASELLRVTA-CGFGFDSITNEYKVCRFYYDRKG- 737
+ S + +VCNP+ GE++ +P + + FGF S++N+YKV + +Y K
Sbjct: 149 DSGDKS-DMMVHVCNPVLGEYIDIPVVNTDKKFEHHLAFGFSSVSNQYKVLQTFYPEKDL 207
Query: 736 ------GEVFTLGSSRWRWIENSLPR-STYGNGKHVNNHLHWTSRGHGESFTIVAFDMAA 578
E++T+G+ +WR I N+ R + +++ +HW + AFD +
Sbjct: 208 TAAPCLAEIYTVGTGQWRSIGNASFRLQSLDANAFLHDSIHWIEYRSNSIGFVSAFDFVS 267
Query: 577 EEIHEIGPPPLLGLDNVVLGRDICLFLGVIKERLCLFCDRE--LDHSYYEIWVMKEYGVH 404
E+ + PP + + +GR +GVIK CLF +++ +EIWVM+EYG+
Sbjct: 268 EQFKLVALPPASQIHDG-MGRCYPSSVGVIKG--CLFMTNGVCIENEKFEIWVMEEYGIK 324
Query: 403 GSWAKEYLFPKVALFWSFNSFSLFQFWNDEFLV-PGSNNLGYYDLKEE 263
SW K+++ + + + L+ + E L+ ++G Y K E
Sbjct: 325 ESWTKKFVLSNLEVQHYVSYQPLYFLSSGEILICEDDESIGVYVPKLE 372
>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
gi|222843314|gb|EEE80861.1| f-box family protein [Populus
trichocarpa]
Length = 408
Score = 120 bits (302), Expect = 8e-25
Identities = 101/314 (32%), Positives = 144/314 (45%), Gaps = 28/314 (8%)
Frame = -1
Query: 1240 LPSDIILHILCRIPIKSLSSQCRWVCRTWFNLICHPRFAEIHYEWAIQNCCSPCVVLHNS 1061
LP +I IL R+PI SL + + VCR W + P ++ + Q PCV+LH
Sbjct: 28 LPREIAQDILSRLPITSLV-KFKCVCRAWRAMALDPEVVNLYLSCSTQET-DPCVILHC- 84
Query: 1060 GGDFGLVDHQVF-DNLETSAPVHYLEFLREP--EFVERLEVIGFVNGLLCFSEEFYRCSY 890
DF + ++ F D ++ +R P + EV+G NGLLC S+ + S
Sbjct: 85 --DFPIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCLSDSLFNDSL 142
Query: 889 PVFYYVCNPITGEHLSLPRASELL-RVTACGFGFDSITNEYKVCRFYYDRKGG------- 734
Y+ NP TG + LP++ + + GFGF+ TNEYKV R Y R G
Sbjct: 143 ----YIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSR 198
Query: 733 ---------EVFTLGSSRWRWIENSLPRSTY-----GNGKHVNNHLHWTSRG--HGESFT 602
++ TLG WR SL + +Y + VN LHW SR + +
Sbjct: 199 RIIYPLSQVQILTLGCPGWR----SLGKVSYRLVRRASETLVNGRLHWVSRPCRNKPARR 254
Query: 601 IVAFDMAAEEIHEIGPPPLLGLDNVVLGRDICLF-LGVIKERLCLFCDRELDHSYYEIWV 425
+V+FD+ E+ E+ P GL+ C + L V+ R CL ++ EIWV
Sbjct: 255 LVSFDLTDEQFREVPKPDCGGLNR-------CDYHLAVL--RGCLSVAVYCNYGRLEIWV 305
Query: 424 MKEYGVHGSWAKEY 383
MKEY V SW KEY
Sbjct: 306 MKEYNVKESWVKEY 319
>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
predicted protein [Populus trichocarpa]
Length = 410
Score = 120 bits (300), Expect = 1e-24
Identities = 101/318 (31%), Positives = 144/318 (45%), Gaps = 23/318 (7%)
Frame = -1
Query: 1246 SKLPSDIILHILCRIPIKSLSSQCRWVCRTWFNLICHPRFAEIHYEWAIQNCC--SPCVV 1073
S LP DI IL ++P+KS QCR VCRTW NL+ F+E+ E A SP
Sbjct: 26 SALPDDITADILLQLPLKS-KIQCRCVCRTWRNLLSDSYFSEVQRERAQSMLVLRSPPSC 84
Query: 1072 LHNSGGDFGLVDHQVFDNLETSAPVHYLEFLREPEFVE--RLEVIGFVNGLLCFSEEFYR 899
+ D V D LE+ + + + L + +E++G NGLLC F +
Sbjct: 85 VSRKAAALAPNDFYVVD-LESGSVRNNVMKLNTKNNLPTCHVELVGSCNGLLCL---FDK 140
Query: 898 CSYPVFYYVCNPITGEHLSLP-------RASELLRVTACGFGFDSITNEYKVCRFYYD-- 746
S VFY +CNP+TGEH+ P + + + GFGF +N Y V R
Sbjct: 141 NSKKVFY-LCNPVTGEHVRTPANCKKEKQRGKTILDAVLGFGFSPKSNHYMVLRITRKKL 199
Query: 745 -------RKGGEVFTLGSSRWRWI-ENSLPRSTYGNGKHVNNHLHWTSR--GHGESFTIV 596
R GE+ G + W+ I E P G +N LHW + ++ I
Sbjct: 200 TYPISILRSEGEICIFGDNEWKSIGEIPFPDCKKFFGVSLNGALHWILNLDDYEDADLIC 259
Query: 595 AFDMAAEEIHEIGPPPLLGLDNVVLGRDICLFLGVIKERLCLFCDRELDHSYYEIWVMKE 416
A D+ +++I + PP D + LGV+++ CLF + +IWVMKE
Sbjct: 260 ALDIDSKKIRPMSPPNGFRRDTTEMT------LGVLRD--CLFICDSMTLYNLDIWVMKE 311
Query: 415 YGVHGSWAKEYLFPKVAL 362
YGV SW KE + K +L
Sbjct: 312 YGVKDSWTKEIVIAKTSL 329