BLASTX nr result

ID: Coptis25_contig00001971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001971
         (2023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283625.1| PREDICTED: probable beta-1,4-xylosyltransfer...   493   e-137
ref|XP_004165066.1| PREDICTED: LOW QUALITY PROTEIN: probable bet...   482   e-133
ref|XP_004136238.1| PREDICTED: probable beta-1,4-xylosyltransfer...   478   e-132
ref|XP_003526520.1| PREDICTED: probable beta-1,4-xylosyltransfer...   475   e-131
emb|CAN73652.1| hypothetical protein VITISV_039322 [Vitis vinifera]   474   e-131

>ref|XP_002283625.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Vitis
            vinifera]
          Length = 405

 Score =  493 bits (1269), Expect = e-137
 Identities = 255/413 (61%), Positives = 300/413 (72%), Gaps = 8/413 (1%)
 Frame = +2

Query: 128  MASFRRAQSPAYNKYQYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------AWV 283
            MAS RR QSPAY+   Y                                        A  
Sbjct: 1    MASIRRTQSPAYHDRPYQNGGTSFSVSSPSQKLLSNGKCSSPLPFFSSYGVGIRRFVAGA 60

Query: 284  LFQRYPPKKGNFFTWKWSLKRFLICFTFGFVIGLIPFISPFDDITTSKDFSFEIKQQQLS 463
              Q+Y  K      W+ S  R L+ F  GF++G+ PF    +DI  S+DFSFEIK   ++
Sbjct: 61   FLQKYSRK-----VWRRSAYRCLVFFLLGFLLGMSPF-GEVEDIK-SQDFSFEIKPSPVN 113

Query: 464  TRAQMDLNNVVRRENAVLENLILETKPEVEDDKLSFFSPRKQLIIVTPTYNRAMQAYFLN 643
             +  +D  +VV+RE+ VL+ + L  + + +  +   F P+KQ+I+VTPTYNRA+QA++LN
Sbjct: 114  VK--LDPESVVKREDFVLDTVNLGVERQSKTKERFNFIPKKQIIVVTPTYNRALQAFYLN 171

Query: 644  RLSQVLRLVPPPVLWIVVEMSKESIETSKILRKTGVMYRHLVCMKNSTNVKDRGVHQRNT 823
            RL QVLRLVPPP+LW+VVEM+  S+ET++ILRKTGVMYRH+VC KNSTNVKDRGVHQRN 
Sbjct: 172  RLGQVLRLVPPPILWMVVEMNVASMETAEILRKTGVMYRHIVCTKNSTNVKDRGVHQRNA 231

Query: 824  ALEHIEHHKLDGIVYFADDDNVYALALFESLREISRFGTWPVAMLAPSKNKAILEGPVCN 1003
            ALEHIEHHKLDGIVYFADDDN+Y+L LF+ LREISRFGTWPVAMLA SKNKAILEGPVCN
Sbjct: 232  ALEHIEHHKLDGIVYFADDDNIYSLELFKGLREISRFGTWPVAMLAQSKNKAILEGPVCN 291

Query: 1004 GSQVIGWHTNEKSKKLRRFHVDMSGFAFNSTILWNPKRWHRPTSDSIRQLDTVKEGFQET 1183
            GSQVIGWHTNEKSK+LRRFHVDMSGFAFNSTILW+PK+W RPTS  I+QLDTVKEGFQET
Sbjct: 292  GSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKKWRRPTSAPIQQLDTVKEGFQET 351

Query: 1184 TFIEQIVEDESQMEPIPYQCLRIMNWHLHLEGRNFVYPRGWHLQKNLVTVVPL 1342
            TFIEQ+VEDESQME  P  C RIMNWHLHLE RN VYPRGW LQKNL  V+P+
Sbjct: 352  TFIEQLVEDESQMEGTPAGCSRIMNWHLHLEARNLVYPRGWLLQKNLDVVLPI 404


>ref|XP_004165066.1| PREDICTED: LOW QUALITY PROTEIN: probable beta-1,4-xylosyltransferase
            IRX9H-like [Cucumis sativus]
          Length = 407

 Score =  482 bits (1240), Expect = e-133
 Identities = 239/351 (68%), Positives = 286/351 (81%), Gaps = 3/351 (0%)
 Frame = +2

Query: 299  PPKKGNFFTWKWSLKRFLICFTFGFVIGLIPFISPFDDITTSKDFSFEIKQQQLSTRAQM 478
            PP+KG+  +W+ +  R  + F  GF++G++PF    DDI  S DFSFEIK   ++ + + 
Sbjct: 61   PPRKGSN-SWRRAFFRCCVFFLLGFLLGMMPFGHDADDIR-SHDFSFEIKPPHVNVQFEK 118

Query: 479  DLNNVVRRENAVLE--NLILETKPEVEDDKLSFFS-PRKQLIIVTPTYNRAMQAYFLNRL 649
            D +  V RE++V++  NL +++ PEV    LSF S P+ QLI+VTPTYNRA+QAYFLNRL
Sbjct: 119  DSHGQVWREDSVVDSVNLSVKSSPEVN---LSFVSVPKTQLIVVTPTYNRALQAYFLNRL 175

Query: 650  SQVLRLVPPPVLWIVVEMSKESIETSKILRKTGVMYRHLVCMKNSTNVKDRGVHQRNTAL 829
             Q L+LV PP+LWIVVEM+  S+ET++ILRKTGVMYRHLVC KN T+VKDRGVHQRN AL
Sbjct: 176  GQALKLVNPPLLWIVVEMNSASMETAEILRKTGVMYRHLVCTKNMTDVKDRGVHQRNVAL 235

Query: 830  EHIEHHKLDGIVYFADDDNVYALALFESLREISRFGTWPVAMLAPSKNKAILEGPVCNGS 1009
            +HIE HKLDGIVYFADDDN+Y+L LF+SLR+ISRFGTWPVAMLA  +NKA+LEGPVCNGS
Sbjct: 236  QHIERHKLDGIVYFADDDNIYSLELFDSLRDISRFGTWPVAMLAQXQNKAVLEGPVCNGS 295

Query: 1010 QVIGWHTNEKSKKLRRFHVDMSGFAFNSTILWNPKRWHRPTSDSIRQLDTVKEGFQETTF 1189
            QVIGWHTNEKSK+LRRFHVDMSGFAFNSTILW+PKRW RPTS  IRQLDTVKEGFQETTF
Sbjct: 296  QVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTSKPIRQLDTVKEGFQETTF 355

Query: 1190 IEQIVEDESQMEPIPYQCLRIMNWHLHLEGRNFVYPRGWHLQKNLVTVVPL 1342
            IEQ+VEDESQME +P  CL++MNWHLHLE  NF YP  W  QKNL  V+P+
Sbjct: 356  IEQVVEDESQMEGVPIGCLKVMNWHLHLEVPNFAYPSDWVFQKNLDYVLPI 406


>ref|XP_004136238.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Cucumis
            sativus]
          Length = 415

 Score =  478 bits (1229), Expect = e-132
 Identities = 240/359 (66%), Positives = 287/359 (79%), Gaps = 11/359 (3%)
 Frame = +2

Query: 299  PPKKGNFFTWKWSLKRFLICFTFGFVIGLIPFISPFDDITTSKDFSFEIKQQQLSTRAQM 478
            PP+KG+  +W+ +  R  + F  GF++G++PF    DDI  S DFSFEIK   ++ + + 
Sbjct: 61   PPRKGSN-SWRRAFFRCCVFFLLGFLLGMMPFGHDADDIR-SHDFSFEIKPPHVNVQFEK 118

Query: 479  DLNNVVRRENAVLE--NLILETKPEVEDDKLSFFS-PRKQLIIVTPTYNRAMQAYFLNRL 649
            D +  V RE++V++  NL +++ PEV    LSF S P+ QLI+VTPTYNRA+QAYFLNRL
Sbjct: 119  DSHGQVWREDSVVDSVNLSVKSSPEVN---LSFVSVPKTQLIVVTPTYNRALQAYFLNRL 175

Query: 650  SQVLRLVPPPVLWIVVEMSKESIETSKILRKTGVMYRHLVCMKNSTNVKDRGVHQRNTAL 829
             Q L+LV PP+LWIVVEM+  S+ET++ILRKTGVMYRHLVC KN T+VKDRGVHQRN AL
Sbjct: 176  GQALKLVNPPLLWIVVEMNSASMETAEILRKTGVMYRHLVCTKNMTDVKDRGVHQRNVAL 235

Query: 830  EHIEHHKLDGIVYFADDDNVYALALFESLREISRFGTWPVAMLAPSKNKAILEGPVCNGS 1009
            +HIE HKLDGIVYFADDDN+Y+L LF+SLR+ISRFGTWPVAMLA +KNKA+LEGPVCNGS
Sbjct: 236  QHIERHKLDGIVYFADDDNIYSLELFDSLRDISRFGTWPVAMLAQNKNKAVLEGPVCNGS 295

Query: 1010 QVIGWHTNEKSKKLRRFHVDMSGFAFNSTILWNPKRWHRPTSDSIRQLDTVKEGFQETTF 1189
            QVIGWHTNEKSK+LRRFHVDMSGFAFNSTILW+PKRW RPTS  IRQLDTVKEGFQETTF
Sbjct: 296  QVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTSKPIRQLDTVKEGFQETTF 355

Query: 1190 IEQIVEDESQMEPIPYQCLRIMNWHLHLEGR--------NFVYPRGWHLQKNLVTVVPL 1342
            IEQ+VEDESQME +P  CL++MNWHLHLE          NF YP  W  QKNL  V+P+
Sbjct: 356  IEQVVEDESQMEGVPIGCLKVMNWHLHLEMNWHLHLEVPNFAYPSDWVFQKNLDYVLPI 414


>ref|XP_003526520.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Glycine
            max]
          Length = 414

 Score =  475 bits (1222), Expect = e-131
 Identities = 248/418 (59%), Positives = 293/418 (70%), Gaps = 13/418 (3%)
 Frame = +2

Query: 128  MASFRRAQSPAYNKYQY---NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVLFQRY 298
            MASFRR  SPAY   QY   +                               A  +F R 
Sbjct: 1    MASFRRTLSPAYPDRQYLNGSFSVSSPSHKLPSSNAKYSSPLPEIAAAFRRLAGGVFTRR 60

Query: 299  PPKKGNFFTWKWSLKRFLICFTFGFVIGLIPFISPFDDITTSKDFSFEIKQQQLST---- 466
              +KG    W+    R ++CF  GF++G+ PF    +D+  S + SFE+K   L      
Sbjct: 61   HGRKGQ---WRRVAFRCVLCFFVGFLLGMFPFGHVSEDVR-SHEISFEMKPPPLPRAAAN 116

Query: 467  ------RAQMDLNNVVRRENAVLENLILETKPEVEDDKLSFFSPRKQLIIVTPTYNRAMQ 628
                  R +  L N V RE  V++ + L  + E + ++  F +P+K LI+VTPTY R  Q
Sbjct: 117  NAQQLLREERVLRNRVEREGFVVDPVSLSAEREWQSERFDF-APKKPLIVVTPTYERTFQ 175

Query: 629  AYFLNRLSQVLRLVPPPVLWIVVEMSKESIETSKILRKTGVMYRHLVCMKNSTNVKDRGV 808
            AYFLNRL QVLRLVPPPV+WIVVEM   S+ET+++LRKTGVMYRHLVC KN T+VKDRGV
Sbjct: 176  AYFLNRLGQVLRLVPPPVVWIVVEMKAASMETAEVLRKTGVMYRHLVCNKNLTDVKDRGV 235

Query: 809  HQRNTALEHIEHHKLDGIVYFADDDNVYALALFESLREISRFGTWPVAMLAPSKNKAILE 988
            HQRNTALEHIEHH+LDGIVYFADDDNVY+L LF++LR+ISRFGTWPVAML PSKNKAILE
Sbjct: 236  HQRNTALEHIEHHRLDGIVYFADDDNVYSLELFDALRDISRFGTWPVAMLVPSKNKAILE 295

Query: 989  GPVCNGSQVIGWHTNEKSKKLRRFHVDMSGFAFNSTILWNPKRWHRPTSDSIRQLDTVKE 1168
            GPVCN SQVIGWHTNEKSK+LRRFHVDMSGFAFNSTILW+PKRW RP+S+ IRQLDTVKE
Sbjct: 296  GPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWQRPSSNPIRQLDTVKE 355

Query: 1169 GFQETTFIEQIVEDESQMEPIPYQCLRIMNWHLHLEGRNFVYPRGWHLQKNLVTVVPL 1342
            GFQETTFIEQ+VEDESQME  P  C +I+NWHLHL   N VYP+GW LQKNL  V+P+
Sbjct: 356  GFQETTFIEQLVEDESQMEGSPPGCSKILNWHLHLTAHNIVYPKGWVLQKNLDAVIPV 413


>emb|CAN73652.1| hypothetical protein VITISV_039322 [Vitis vinifera]
          Length = 306

 Score =  474 bits (1220), Expect = e-131
 Identities = 228/306 (74%), Positives = 264/306 (86%)
 Frame = +2

Query: 425  KDFSFEIKQQQLSTRAQMDLNNVVRRENAVLENLILETKPEVEDDKLSFFSPRKQLIIVT 604
            KDFSFEIK   ++ +  +D  +VV+RE+ VL+ + L  + + +  +   F P+KQ+I+VT
Sbjct: 2    KDFSFEIKPSPVNVK--LDPESVVKREDFVLDTVNLGVERQSKTKERFNFIPKKQIIVVT 59

Query: 605  PTYNRAMQAYFLNRLSQVLRLVPPPVLWIVVEMSKESIETSKILRKTGVMYRHLVCMKNS 784
            PTYNRA+QA++LNRL QVLRLVPPP+LW+VVEM+  S+ET++ILRKTGVMYRH+VC KNS
Sbjct: 60   PTYNRALQAFYLNRLGQVLRLVPPPILWMVVEMNVASMETAEILRKTGVMYRHIVCTKNS 119

Query: 785  TNVKDRGVHQRNTALEHIEHHKLDGIVYFADDDNVYALALFESLREISRFGTWPVAMLAP 964
            TNVKDRGVHQRN ALEHIEHHKLDGIVYFADDDN+Y+L LF+ LREISRFGTWPVAMLA 
Sbjct: 120  TNVKDRGVHQRNAALEHIEHHKLDGIVYFADDDNIYSLELFKGLREISRFGTWPVAMLAQ 179

Query: 965  SKNKAILEGPVCNGSQVIGWHTNEKSKKLRRFHVDMSGFAFNSTILWNPKRWHRPTSDSI 1144
            SKNKAILEGPVCNGSQVIGWHTNEKSK+LRRFHVDMSGFAFNSTILW+PK+W RPTS  I
Sbjct: 180  SKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKKWRRPTSAPI 239

Query: 1145 RQLDTVKEGFQETTFIEQIVEDESQMEPIPYQCLRIMNWHLHLEGRNFVYPRGWHLQKNL 1324
            +QLDTVKEGFQETTFIEQ+VEDESQME  P  C RIMNWHLHLE RN VYPRGW LQKNL
Sbjct: 240  QQLDTVKEGFQETTFIEQLVEDESQMEGTPAGCSRIMNWHLHLEARNLVYPRGWLLQKNL 299

Query: 1325 VTVVPL 1342
              V+P+
Sbjct: 300  DVVLPI 305


Top