BLASTX nr result

ID: Coptis25_contig00001954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001954
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16326.1| unknown [Picea sitchensis]                             156   1e-36
ref|XP_003635666.1| PREDICTED: protein transport protein Sec61 s...   155   2e-36
ref|XP_003635558.1| PREDICTED: protein transport protein Sec61 s...   155   2e-36
ref|XP_003540494.1| PREDICTED: protein transport protein Sec61 s...   155   2e-36
ref|XP_003540056.1| PREDICTED: protein transport protein Sec61 s...   155   2e-36

>gb|ABR16326.1| unknown [Picea sitchensis]
          Length = 478

 Score =  156 bits (395), Expect = 1e-36
 Identities = 79/87 (90%), Positives = 81/87 (93%)
 Frame = +2

Query: 2   SIIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATV 181
           SIIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATV
Sbjct: 194 SIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATV 253

Query: 182 LIFLIVIYFQGFRVVLPVRLKNARGQQ 262
           L+FLIVIYFQGFRVVLPVR KNARGQQ
Sbjct: 254 LVFLIVIYFQGFRVVLPVRSKNARGQQ 280


>ref|XP_003635666.1| PREDICTED: protein transport protein Sec61 subunit alpha-like,
           partial [Vitis vinifera]
          Length = 314

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/87 (90%), Positives = 81/87 (93%)
 Frame = +2

Query: 2   SIIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATV 181
           +IIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATV
Sbjct: 193 NIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATV 252

Query: 182 LIFLIVIYFQGFRVVLPVRLKNARGQQ 262
           LIFLIVIYFQGFRVVLPVR KNARGQQ
Sbjct: 253 LIFLIVIYFQGFRVVLPVRSKNARGQQ 279


>ref|XP_003635558.1| PREDICTED: protein transport protein Sec61 subunit alpha-like,
           partial [Vitis vinifera]
          Length = 304

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/87 (90%), Positives = 81/87 (93%)
 Frame = +2

Query: 2   SIIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATV 181
           +IIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATV
Sbjct: 193 NIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATV 252

Query: 182 LIFLIVIYFQGFRVVLPVRLKNARGQQ 262
           LIFLIVIYFQGFRVVLPVR KNARGQQ
Sbjct: 253 LIFLIVIYFQGFRVVLPVRSKNARGQQ 279


>ref|XP_003540494.1| PREDICTED: protein transport protein Sec61 subunit alpha-like
           [Glycine max]
          Length = 476

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/87 (90%), Positives = 81/87 (93%)
 Frame = +2

Query: 2   SIIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATV 181
           +IIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATV
Sbjct: 193 NIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATV 252

Query: 182 LIFLIVIYFQGFRVVLPVRLKNARGQQ 262
           LIFLIVIYFQGFRVVLPVR KNARGQQ
Sbjct: 253 LIFLIVIYFQGFRVVLPVRSKNARGQQ 279


>ref|XP_003540056.1| PREDICTED: protein transport protein Sec61 subunit alpha-like
           [Glycine max]
          Length = 476

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/87 (90%), Positives = 81/87 (93%)
 Frame = +2

Query: 2   SIIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATV 181
           +IIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATV
Sbjct: 193 NIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATV 252

Query: 182 LIFLIVIYFQGFRVVLPVRLKNARGQQ 262
           LIFLIVIYFQGFRVVLPVR KNARGQQ
Sbjct: 253 LIFLIVIYFQGFRVVLPVRSKNARGQQ 279


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